RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 RCSD1Q6JBY9 416 aa17.71■□□□□ 0.43
CTSB-230ENST00000534149 TSPYL2Q9H2G4 693 aaPredicted RBP17.71■□□□□ 0.43
CTSB-230ENST00000534149 TSPY2A6NKD2 308 aa17.7■□□□□ 0.42
CTSB-230ENST00000534149 LRRFIP1Q32MZ4 808 aaKnown RBP17.7■□□□□ 0.42
CTSB-230ENST00000534149 DEFB128Q7Z7B8 93 aa17.7■□□□□ 0.42
CTSB-230ENST00000534149 INCENPQ9NQS7 918 aa17.7■□□□□ 0.42
CTSB-230ENST00000534149 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.7■□□□□ 0.426e-6■■□□□ 13.9
CTSB-230ENST00000534149 TNKSO95271 1327 aa17.7■□□□□ 0.42
CTSB-230ENST00000534149 RFXAPO00287 272 aa17.69■□□□□ 0.42
CTSB-230ENST00000534149 CTDSPL2Q05D32 466 aa17.69■□□□□ 0.42
CTSB-230ENST00000534149 SKIV2LQ15477 1246 aaKnown RBP17.69■□□□□ 0.42
CTSB-230ENST00000534149 CCDC96Q2M329 555 aa17.69■□□□□ 0.42
CTSB-230ENST00000534149 DUSP28Q4G0W2 176 aa17.69■□□□□ 0.42
CTSB-230ENST00000534149 PPP4R3BQ5MIZ7 849 aa17.69■□□□□ 0.42
CTSB-230ENST00000534149 MORC4Q8TE76 937 aa17.69■□□□□ 0.42
CTSB-230ENST00000534149 DCTPP1Q9H773 170 aa17.69■□□□□ 0.42
CTSB-230ENST00000534149 IL17RBQ9NRM6 502 aa17.69■□□□□ 0.42
CTSB-230ENST00000534149 RCAN3Q9UKA8 241 aa17.69■□□□□ 0.42
CTSB-230ENST00000534149 ICAM1P05362 532 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 CA3P07451 260 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 PFKMP08237 780 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 MYL3P08590 195 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 BMP1P13497 986 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 ALDH5A1P51649 535 aaPredicted RBP17.68■□□□□ 0.42
CTSB-230ENST00000534149 KCNQ1P51787 676 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 PURAQ00577 322 aaKnown RBP17.68■□□□□ 0.42
CTSB-230ENST00000534149 BAATQ14032 418 aaPredicted RBP17.68■□□□□ 0.42
CTSB-230ENST00000534149 TMEM67Q5HYA8 995 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 ZMYM1Q5SVZ6 1142 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 PPP1R13LQ8WUF5 828 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 FSD1Q9BTV5 496 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 WDR11Q9BZH6 1224 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 CERS4Q9HA82 394 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 POLR3EQ9NVU0 708 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 SCN10AQ9Y5Y9 1956 aa17.68■□□□□ 0.42
CTSB-230ENST00000534149 NFIBO00712 420 aa17.67■□□□□ 0.42
CTSB-230ENST00000534149 FOXP2O15409 715 aa17.67■□□□□ 0.42
CTSB-230ENST00000534149 SUPT20HL2P0C7V6 817 aa17.67■□□□□ 0.42
CTSB-230ENST00000534149 SLC16A2P36021 539 aa17.67■□□□□ 0.42
CTSB-230ENST00000534149 TTBK2Q6IQ55 1244 aa17.67■□□□□ 0.42
CTSB-230ENST00000534149 RANBP17Q9H2T7 1088 aaKnown RBP17.67■□□□□ 0.42
CTSB-230ENST00000534149 MTCH2Q9Y6C9 303 aa17.67■□□□□ 0.42
CTSB-230ENST00000534149 TANC1Q9C0D5 1861 aa17.67■□□□□ 0.42
CTSB-230ENST00000534149 PTPDC1A2A3K4 754 aa17.66■□□□□ 0.42
CTSB-230ENST00000534149 EPOPA6NHQ4 379 aa17.66■□□□□ 0.42
CTSB-230ENST00000534149 RANBP6O60518 1105 aaKnown RBP17.66■□□□□ 0.42
CTSB-230ENST00000534149 CPT1AP50416 773 aa17.66■□□□□ 0.42
CTSB-230ENST00000534149 FAM47CQ5HY64 1035 aa17.66■□□□□ 0.42
CTSB-230ENST00000534149 OR6J1Q8NGC5 347 aa17.66■□□□□ 0.42
CTSB-230ENST00000534149 PI4K2BQ8TCG2 481 aa17.66■□□□□ 0.42
CTSB-230ENST00000534149 MTG1Q9BT17 334 aaPredicted RBP17.66■□□□□ 0.42
CTSB-230ENST00000534149 ADD3Q9UEY8 706 aaKnown RBP17.66■□□□□ 0.42
CTSB-230ENST00000534149 TET1Q8NFU7 2136 aa17.66■□□□□ 0.42
CTSB-230ENST00000534149 TTC41PQ6P2S7 1318 aa17.66■□□□□ 0.42
CTSB-230ENST00000534149 ERC2O15083 957 aa17.65■□□□□ 0.42
CTSB-230ENST00000534149 GTPBP6O43824 516 aaPredicted RBP17.65■□□□□ 0.42
CTSB-230ENST00000534149 ACTN1P12814 892 aa17.65■□□□□ 0.42
CTSB-230ENST00000534149 PLA2G5P39877 138 aa17.65■□□□□ 0.42
CTSB-230ENST00000534149 AAK1Q2M2I8 961 aa17.65■□□□□ 0.42
CTSB-230ENST00000534149 NBPF20Q3BBV1 942 aa17.65■□□□□ 0.42
CTSB-230ENST00000534149 KRT40Q6A162 431 aa17.65■□□□□ 0.42
CTSB-230ENST00000534149 SLC30A10Q6XR72 485 aa17.65■□□□□ 0.42
CTSB-230ENST00000534149 OTUD7AQ8TE49 926 aaPredicted RBP17.65■□□□□ 0.42
CTSB-230ENST00000534149 DCAF4Q8WV16 495 aa17.65■□□□□ 0.42
CTSB-230ENST00000534149 GPHNQ9NQX3 736 aaPredicted RBP17.65■□□□□ 0.42
CTSB-230ENST00000534149 RBM47A0AV96 593 aaKnown RBP17.64■□□□□ 0.41
CTSB-230ENST00000534149 ARHGEF15O94989 841 aa17.64■□□□□ 0.41
CTSB-230ENST00000534149 CALML3P27482 149 aa17.64■□□□□ 0.41
CTSB-230ENST00000534149 SYDE2Q5VT97 1194 aa17.64■□□□□ 0.41
CTSB-230ENST00000534149 SLC9A7Q96T83 725 aa17.64■□□□□ 0.41
CTSB-230ENST00000534149 FRMPD2Q68DX3 1309 aaPredicted RBP17.64■□□□□ 0.41
CTSB-230ENST00000534149 TRIP12Q14669 1992 aaPredicted RBP17.63■□□□□ 0.41
CTSB-230ENST00000534149 POU3F3P20264 500 aaPredicted RBP17.63■□□□□ 0.41
CTSB-230ENST00000534149 NOVP48745 357 aa17.63■□□□□ 0.41
CTSB-230ENST00000534149 PPP2R5BQ15173 497 aa17.63■□□□□ 0.41
CTSB-230ENST00000534149 VPS53Q5VIR6 699 aa17.63■□□□□ 0.41
CTSB-230ENST00000534149 BTNL9Q6UXG8 535 aa17.63■□□□□ 0.41
CTSB-230ENST00000534149 ARNTL2Q8WYA1 636 aa17.63■□□□□ 0.41
CTSB-230ENST00000534149 COPS5Q92905 334 aa17.63■□□□□ 0.41
CTSB-230ENST00000534149 FAM122AQ96E09 287 aa17.63■□□□□ 0.41
CTSB-230ENST00000534149 FTOQ9C0B1 505 aaKnown RBP eCLIP17.63■□□□□ 0.413e-19■□□□□ 9.3
CTSB-230ENST00000534149 GPCPD1Q9NPB8 672 aa17.63■□□□□ 0.41
CTSB-230ENST00000534149 PTPRSQ13332 1948 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 PITPNM1O00562 1244 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 IQCF3P0C7M6 154 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 RFC2P35250 354 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 TAP1Q03518 808 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 PDE4DQ08499 809 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
CTSB-230ENST00000534149 BRDTQ58F21 947 aaPredicted RBP17.62■□□□□ 0.41
CTSB-230ENST00000534149 NFRKBQ6P4R8 1299 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 RETREG2Q8NC44 543 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 CLEC4DQ8WXI8 215 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 C1QTNF1Q9BXJ1 281 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 ANAPC4Q9UJX5 808 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 RAD50Q92878 1312 aa17.62■□□□□ 0.41
CTSB-230ENST00000534149 COL4A4P53420 1690 aaPredicted RBP17.61■□□□□ 0.41
CTSB-230ENST00000534149 ORC4O43929 436 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms