RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CDC37Q16543 378 aaPredicted RBP18.04■□□□□ 0.48
CPSF1-211ENST00000533492 SLC30A10Q6XR72 485 aa18.04■□□□□ 0.48
CPSF1-211ENST00000533492 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
CPSF1-211ENST00000533492 MORC4Q8TE76 937 aa18.04■□□□□ 0.48
CPSF1-211ENST00000533492 Q9Y3F1 56 aa18.04■□□□□ 0.48
CPSF1-211ENST00000533492 ARVCFO00192 962 aa18.03■□□□□ 0.48
CPSF1-211ENST00000533492 CTAGE5O15320 804 aa18.03■□□□□ 0.48
CPSF1-211ENST00000533492 PDE4DQ08499 809 aa18.03■□□□□ 0.48
CPSF1-211ENST00000533492 FAAP100Q0VG06 881 aa18.03■□□□□ 0.48
CPSF1-211ENST00000533492 FSCN1Q16658 493 aaKnown RBP18.03■□□□□ 0.48
CPSF1-211ENST00000533492 DEFB123Q8N688 67 aa18.03■□□□□ 0.48
CPSF1-211ENST00000533492 LTBP2Q14767 1821 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 ABCB11O95342 1321 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 ERICH2A1L162 156 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 TLR3O15455 904 aaKnown RBP18.02■□□□□ 0.48
CPSF1-211ENST00000533492 SGSM2O43147 1006 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 CABYRO75952 493 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 CYP21A2P08686 494 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 CDK7P50613 346 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 SHHQ15465 462 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 CXCL17Q6UXB2 119 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 CYB5R4Q7L1T6 521 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 RALYLQ86SE5 291 aaKnown RBP18.02■□□□□ 0.48
CPSF1-211ENST00000533492 RGS22Q8NE09 1264 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 DNERQ8NFT8 737 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 WDR11Q9BZH6 1224 aa18.02■□□□□ 0.48
CPSF1-211ENST00000533492 LAMA3Q16787 3333 aa18.01■□□□□ 0.47
CPSF1-211ENST00000533492 IFIT3O14879 490 aaKnown RBP18.01■□□□□ 0.47
CPSF1-211ENST00000533492 ITGB8P26012 769 aa18.01■□□□□ 0.47
CPSF1-211ENST00000533492 SEC23AQ15436 765 aa18.01■□□□□ 0.47
CPSF1-211ENST00000533492 QRICH1Q2TAL8 776 aa18.01■□□□□ 0.47
CPSF1-211ENST00000533492 DUSP28Q4G0W2 176 aa18.01■□□□□ 0.47
CPSF1-211ENST00000533492 FBXO11Q86XK2 927 aa18.01■□□□□ 0.47
CPSF1-211ENST00000533492 MCF2L2Q86YR7 1114 aa18.01■□□□□ 0.47
CPSF1-211ENST00000533492 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
CPSF1-211ENST00000533492 MRPL11Q9Y3B7 192 aaKnown RBP18.01■□□□□ 0.47
CPSF1-211ENST00000533492 LCTP09848 1927 aa18.01■□□□□ 0.47
CPSF1-211ENST00000533492 KLRF2D3W0D1 207 aa18■□□□□ 0.47
CPSF1-211ENST00000533492 E7EWF7 191 aa18■□□□□ 0.47
CPSF1-211ENST00000533492 PTGS1P23219 599 aa18■□□□□ 0.47
CPSF1-211ENST00000533492 FPGSQ05932 587 aa18■□□□□ 0.47
CPSF1-211ENST00000533492 SART3Q15020 963 aaKnown RBP18■□□□□ 0.47
CPSF1-211ENST00000533492 C9orf50Q5SZB4 431 aa18■□□□□ 0.47
CPSF1-211ENST00000533492 TMEM63BQ5T3F8 832 aa18■□□□□ 0.47
CPSF1-211ENST00000533492 Q7L0L9 218 aa18■□□□□ 0.47
CPSF1-211ENST00000533492 MAF1Q9H063 256 aa18■□□□□ 0.47
CPSF1-211ENST00000533492 JMJD4Q9H9V9 463 aa18■□□□□ 0.47
CPSF1-211ENST00000533492 RBM47A0AV96 593 aaKnown RBP17.99■□□□□ 0.47
CPSF1-211ENST00000533492 TIMP1P01033 207 aa17.99■□□□□ 0.47
CPSF1-211ENST00000533492 ITGA7Q13683 1181 aa17.99■□□□□ 0.47
CPSF1-211ENST00000533492 BRDTQ58F21 947 aaPredicted RBP17.99■□□□□ 0.47
CPSF1-211ENST00000533492 STAG2Q8N3U4 1231 aa17.99■□□□□ 0.47
CPSF1-211ENST00000533492 TBC1D5Q92609 795 aa17.99■□□□□ 0.47
CPSF1-211ENST00000533492 MAP4K1Q92918 833 aa17.99■□□□□ 0.47
CPSF1-211ENST00000533492 MYH6P13533 1939 aa17.98■□□□□ 0.47
CPSF1-211ENST00000533492 WTAPQ15007 396 aa17.98■□□□□ 0.47
CPSF1-211ENST00000533492 PPP2R5BQ15173 497 aa17.98■□□□□ 0.47
CPSF1-211ENST00000533492 FAM126BQ8IXS8 530 aa17.98■□□□□ 0.47
CPSF1-211ENST00000533492 OR6J1Q8NGC5 347 aa17.98■□□□□ 0.47
CPSF1-211ENST00000533492 SCFD2Q8WU76 684 aa17.98■□□□□ 0.47
CPSF1-211ENST00000533492 AMNQ9BXJ7 453 aa17.98■□□□□ 0.47
CPSF1-211ENST00000533492 SEZ6LQ9BYH1 1024 aa17.98■□□□□ 0.47
CPSF1-211ENST00000533492 GPHNQ9NQX3 736 aaPredicted RBP17.98■□□□□ 0.47
CPSF1-211ENST00000533492 TBX21Q9UL17 535 aa17.98■□□□□ 0.47
CPSF1-211ENST00000533492 LRRC37A2A6NM11 1700 aa17.98■□□□□ 0.47
CPSF1-211ENST00000533492 PALM3A6NDB9 673 aaPredicted RBP17.97■□□□□ 0.47
CPSF1-211ENST00000533492 NKRFO15226 690 aaKnown RBP eCLIP17.97■□□□□ 0.47
CPSF1-211ENST00000533492 EDNRBP24530 442 aa17.97■□□□□ 0.47
CPSF1-211ENST00000533492 CPT1AP50416 773 aa17.97■□□□□ 0.47
CPSF1-211ENST00000533492 MFSD5Q6N075 450 aa17.97■□□□□ 0.47
CPSF1-211ENST00000533492 CHST3Q7LGC8 479 aa17.97■□□□□ 0.47
CPSF1-211ENST00000533492 SYTL5Q8TDW5 730 aaPredicted RBP17.97■□□□□ 0.47
CPSF1-211ENST00000533492 NSUN6Q8TEA1 469 aaKnown RBP17.97■□□□□ 0.47
CPSF1-211ENST00000533492 RNPC3Q96LT9 517 aaKnown RBP17.97■□□□□ 0.47
CPSF1-211ENST00000533492 TAAR1Q96RJ0 339 aa17.97■□□□□ 0.47
CPSF1-211ENST00000533492 POLR3EQ9NVU0 708 aa17.97■□□□□ 0.47
CPSF1-211ENST00000533492 MAD2L2Q9UI95 211 aa17.97■□□□□ 0.47
CPSF1-211ENST00000533492 RBM8AQ9Y5S9 174 aaKnown RBP17.97■□□□□ 0.47
CPSF1-211ENST00000533492 CFBP00751 764 aa17.96■□□□□ 0.47
CPSF1-211ENST00000533492 MYL3P08590 195 aa17.96■□□□□ 0.47
CPSF1-211ENST00000533492 TXNP10599 105 aaKnown RBP17.96■□□□□ 0.47
CPSF1-211ENST00000533492 TTLL4Q14679 1199 aa17.96■□□□□ 0.47
CPSF1-211ENST00000533492 TMEM67Q5HYA8 995 aa17.96■□□□□ 0.47
CPSF1-211ENST00000533492 CATIPQ7Z7H3 387 aa17.96■□□□□ 0.47
CPSF1-211ENST00000533492 SLC43A3Q8NBI5 491 aa17.96■□□□□ 0.47
CPSF1-211ENST00000533492 RMDN3Q96TC7 470 aa17.96■□□□□ 0.47
CPSF1-211ENST00000533492 PPP1R12CQ9BZL4 782 aa17.96■□□□□ 0.47
CPSF1-211ENST00000533492 MTMR10Q9NXD2 777 aa17.96■□□□□ 0.47
CPSF1-211ENST00000533492 TAF6LQ9Y6J9 622 aa17.96■□□□□ 0.47
CPSF1-211ENST00000533492 ZBTB5O15062 677 aa17.95■□□□□ 0.46
CPSF1-211ENST00000533492 CD4P01730 458 aa17.95■□□□□ 0.46
CPSF1-211ENST00000533492 EPHB4P54760 987 aa17.95■□□□□ 0.46
CPSF1-211ENST00000533492 PSMC6P62333 389 aa17.95■□□□□ 0.46
CPSF1-211ENST00000533492 TRAF1Q13077 416 aa17.95■□□□□ 0.46
CPSF1-211ENST00000533492 PPIGQ13427 754 aaKnown RBP eCLIP17.95■□□□□ 0.461e-9■■■□□ 14.7
CPSF1-211ENST00000533492 GRM4Q14833 912 aa17.95■□□□□ 0.46
CPSF1-211ENST00000533492 STXBP2Q15833 593 aa17.95■□□□□ 0.46
CPSF1-211ENST00000533492 ARHGEF16Q5VV41 709 aa17.95■□□□□ 0.46
CPSF1-211ENST00000533492 FAM109BQ6ICB4 259 aaPredicted RBP17.95■□□□□ 0.46
CPSF1-211ENST00000533492 STOX1Q6ZVD7 989 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms