RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 HVCN1Q96D96 273 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 EDC3Q96F86 508 aaKnown RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 OSBPL5Q9H0X9 879 aaPredicted RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 TSPYL2Q9H2G4 693 aaPredicted RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 GOLPH3LQ9H4A5 285 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 UTP6Q9NYH9 597 aaKnown RBP6.07□□□□□ -1.44
CKAP5-212ENST00000533413 IFNKQ9P0W0 207 aa6.07□□□□□ -1.44
CKAP5-212ENST00000533413 A0A087WWV3 80 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 IRS4O14654 1257 aaPredicted RBP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 CAND2O75155 1236 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 MYL1P05976 194 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 IGKV5-2P06315 115 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 TPM1P09493 284 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 ATP5JP18859 108 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 GRAPQ13588 217 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 GCKRQ14397 625 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 NFE2Q16621 373 aaPredicted RBP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 ARHGAP29Q52LW3 1261 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 IL31Q6EBC2 164 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 ANKRD42Q8N9B4 389 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 NSUN7Q8NE18 718 aaKnown RBP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 GRAPLQ8TC17 118 aaPredicted RBP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 PPP1R13BQ96KQ4 1090 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 IWS1Q96ST2 819 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 LZTS2Q9BRK4 669 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 FTOQ9C0B1 505 aaKnown RBP eCLIP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 ST7Q9NRC1 585 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 PRKAB1Q9Y478 270 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.06□□□□□ -1.442e-8■■□□□ 12
CKAP5-212ENST00000533413 SNED1Q8TER0 1413 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 PPEF1O14829 653 aaPredicted RBP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 SNX2O60749 519 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 SLC3A2P08195 630 aaKnown RBP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 CYP21A2P08686 494 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 SMARCA1P28370 1054 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 HOXD11P31277 338 aaPredicted RBP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 APOBRQ0VD83 1088 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 MTMR3Q13615 1198 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 SYNE3Q6ZMZ3 975 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 CCDC129Q6ZRS4 1044 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 GOLGA6L1Q8N7Z2 621 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 KLHDC4Q8TBB5 520 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 ERCC4Q92889 916 aaPredicted RBP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 SKA1Q96BD8 255 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 POLR3CQ9BUI4 534 aaPredicted RBP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 SH3GLB2Q9NR46 395 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 CWC15Q9P013 229 aaKnown RBP6.06□□□□□ -1.44
CKAP5-212ENST00000533413 KIAA1468Q9P260 1216 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 DNAI1Q9UI46 699 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 IKBKGQ9Y6K9 419 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 PSME4Q14997 1843 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 WDR90Q96KV7 1748 aa6.06□□□□□ -1.44
CKAP5-212ENST00000533413 A0A1B0GVL5 298 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 ADD1P35611 737 aaKnown RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 PPM1FP49593 454 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 NEK3P51956 506 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 GPS2Q13227 327 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 RASA3Q14644 834 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 TTF1Q15361 905 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 TTC31Q49AM3 519 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 KIAA1614Q5VZ46 1190 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 ADALQ6DHV7 355 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 MAATS1Q7Z4T9 603 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 REXO1L1PQ8IX06 675 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 SP8Q8IXZ3 490 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 ENGASEQ8NFI3 743 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 KCNG4Q8TDN1 519 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 SERINC2Q96SA4 455 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 SRRTQ9BXP5 876 aaKnown RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 SLC7A5P2Q9GIP4 190 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 DCAF16Q9NXF7 216 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 PPP1R9AQ9ULJ8 1098 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 A0A1W2PQ27 194 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 A0A1W2PQ64 194 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 A0A1W2PQD8 194 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 ATP5J2-PTCD1G3V325 749 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 BIN1O00499 593 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 ORC4O43929 436 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 URI1O94763 535 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 SERPINC1P01008 464 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 MYCLP1P12525 358 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 CTSWP56202 376 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 MDM2Q00987 491 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 FKBP4Q02790 459 aaKnown RBP eCLIP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 ZSCAN26Q16670 478 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 E4F1Q66K89 784 aaPredicted RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 TAX1BP1Q86VP1 789 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 C7orf43Q8WVR3 580 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 L2HGDHQ9H9P8 463 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 PCDHA7Q9UN72 937 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 SCN4AP35499 1836 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 ENPP3O14638 875 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 STIP1P31948 543 aaKnown RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 KCNJ6P48051 423 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 CLCN6P51797 869 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 ETF1P62495 437 aaKnown RBP6.05□□□□□ -1.44
CKAP5-212ENST00000533413 TFCP2Q12800 502 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 TNNI3KQ59H18 835 aa6.05□□□□□ -1.44
CKAP5-212ENST00000533413 MMS22LQ6ZRQ5 1243 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms