RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 FBXO11Q86XK2 927 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 GPR161Q8N6U8 529 aaKnown RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 GOLGA6CA6NDK9 693 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 NDUFAB1O14561 156 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 KCNK3O14649 394 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 PRPF3O43395 683 aaKnown RBP13.47□□□□□ -0.25
BDNF-218ENST00000533246 GOLGA6DP0CG33 693 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 EHHADHQ08426 723 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 VSTM4Q8IW00 320 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 SGSM3Q96HU1 749 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 GOLGA6AQ9NYA3 693 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 USTQ9Y2C2 406 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 TEX33O43247 280 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 ALDH1B1P30837 517 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 VPS41P49754 854 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 QTRT2Q9H974 415 aaKnown RBP13.47□□□□□ -0.25
BDNF-218ENST00000533246 DCP1AQ9NPI6 582 aaPredicted RBP13.47□□□□□ -0.25
BDNF-218ENST00000533246 LEMD3Q9Y2U8 911 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 CLIC2O15247 247 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 TPD52L2O43399 206 aaKnown RBP13.47□□□□□ -0.25
BDNF-218ENST00000533246 TUBBP07437 444 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 RFX5P48382 616 aaPredicted RBP13.47□□□□□ -0.25
BDNF-218ENST00000533246 CDK8P49336 464 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 ARMC2Q8NEN0 867 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 LARP4BQ92615 738 aaKnown RBP13.47□□□□□ -0.25
BDNF-218ENST00000533246 DPF2Q92785 391 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 NT5C3AQ9H0P0 336 aa13.47□□□□□ -0.25
BDNF-218ENST00000533246 OVOS2A0A0J9YW53 1432 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 RAD17O75943 681 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 IRX1P78414 480 aaPredicted RBP13.46□□□□□ -0.25
BDNF-218ENST00000533246 CALCOCO2Q13137 446 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 OVOS2Q6IE36 1432 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 AFAP1L1Q8TED9 768 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 EFCAB8A8MWE9 144 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 KIF3CO14782 793 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 CALUO43852 315 aaPredicted RBP13.46□□□□□ -0.25
BDNF-218ENST00000533246 RPSAP08865 295 aaKnown RBP13.46□□□□□ -0.25
BDNF-218ENST00000533246 RANBP1P43487 201 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 SH3GL3Q99963 347 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 HAUS4Q9H6D7 363 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 ZNF408Q9H9D4 720 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 MKRN1Q9UHC7 482 aaKnown RBP13.46□□□□□ -0.25
BDNF-218ENST00000533246 SERPINA10Q9UK55 444 aa13.46□□□□□ -0.25
BDNF-218ENST00000533246 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
BDNF-218ENST00000533246 SCP2P22307 547 aa13.46□□□□□ -0.26
BDNF-218ENST00000533246 TMTC3Q6ZXV5 915 aa13.46□□□□□ -0.26
BDNF-218ENST00000533246 MIGA2Q7L4E1 593 aa13.46□□□□□ -0.26
BDNF-218ENST00000533246 FAM84BQ96KN1 310 aaPredicted RBP13.46□□□□□ -0.26
BDNF-218ENST00000533246 CSRNP1Q96S65 589 aa13.46□□□□□ -0.26
BDNF-218ENST00000533246 IRX2Q9BZI1 471 aaPredicted RBP13.46□□□□□ -0.26
BDNF-218ENST00000533246 PDE11AQ9HCR9 933 aa13.46□□□□□ -0.26
BDNF-218ENST00000533246 STK32BQ9NY57 414 aa13.46□□□□□ -0.26
BDNF-218ENST00000533246 RASAL2Q9UJF2 1139 aa13.46□□□□□ -0.26
BDNF-218ENST00000533246 IKBKGQ9Y6K9 419 aa13.46□□□□□ -0.26
BDNF-218ENST00000533246 FDPSP14324 419 aaKnown RBP13.45□□□□□ -0.26
BDNF-218ENST00000533246 HOXA13P31271 388 aaPredicted RBP13.45□□□□□ -0.26
BDNF-218ENST00000533246 ATP1A2P50993 1020 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 SMTNP53814 917 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 KMT5BQ4FZB7 885 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 CFAP221Q4G0U5 840 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 FAM178BQ8IXR5 827 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 CCDC51Q96ER9 411 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 NRKQ7Z2Y5 1582 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 SFI1A8K8P3 1242 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 FLOT1O75955 427 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 CTDNEP1O95476 244 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 TUBB4BP68371 445 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 KRT31Q15323 416 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 ABCB5Q2M3G0 1257 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 VWA3BQ502W6 1294 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 STAG1Q8WVM7 1258 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 NAP1L4Q99733 375 aaKnown RBP13.45□□□□□ -0.26
BDNF-218ENST00000533246 TMEM47Q9BQJ4 181 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 CDC23Q9UJX2 597 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 CAPN7Q9Y6W3 813 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 IQSEC2Q5JU85 1478 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 PRPHP41219 470 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 STAT1P42224 750 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 TSGA10IPQ3SY00 556 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 RESP18Q5W5W9 173 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 STAG2Q8N3U4 1231 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 P2RX5Q93086 422 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 KANSL2Q9H9L4 492 aa13.45□□□□□ -0.26
BDNF-218ENST00000533246 POTEMA6NI47 508 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 TRIM28Q13263 835 aaKnown RBP13.44□□□□□ -0.26
BDNF-218ENST00000533246 PLA2G4DQ86XP0 818 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 EFCAB13Q8IY85 973 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.44□□□□□ -0.26
BDNF-218ENST00000533246 ANKRD7Q92527 254 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 GLT8D2Q9H1C3 349 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 PICK1Q9NRD5 415 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 ADAMTS13Q76LX8 1427 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 A0A087WUV0 522 aaPredicted RBP13.44□□□□□ -0.26
BDNF-218ENST00000533246 IRF6O14896 467 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 SEMA3EO15041 775 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 NR2F2P24468 414 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 ANTXR2P58335 489 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 NKX1-1Q15270 411 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms