RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ALDH5A1P51649 535 aaPredicted RBP23.72■■□□□ 1.39
CCS-208ENST00000533244 TRAF1Q13077 416 aa23.72■■□□□ 1.39
CCS-208ENST00000533244 SYNE3Q6ZMZ3 975 aa23.72■■□□□ 1.39
CCS-208ENST00000533244 Q6ZUG5 572 aa23.72■■□□□ 1.39
CCS-208ENST00000533244 TMTC3Q6ZXV5 915 aa23.72■■□□□ 1.39
CCS-208ENST00000533244 MCF2L2Q86YR7 1114 aa23.72■■□□□ 1.39
CCS-208ENST00000533244 RAB11FIP4Q86YS3 637 aa23.72■■□□□ 1.39
CCS-208ENST00000533244 TBC1D5Q92609 795 aa23.72■■□□□ 1.39
CCS-208ENST00000533244 PAWRQ96IZ0 340 aaKnown RBP23.72■■□□□ 1.39
CCS-208ENST00000533244 ZSWIM6Q9HCJ5 1215 aa23.72■■□□□ 1.39
CCS-208ENST00000533244 PCDHA1Q9Y5I3 950 aa23.72■■□□□ 1.39
CCS-208ENST00000533244 ZBTB43O43298 467 aa23.71■■□□□ 1.39
CCS-208ENST00000533244 DNERQ8NFT8 737 aa23.71■■□□□ 1.39
CCS-208ENST00000533244 KLF18A0A0U1RQI7 1052 aa23.7■■□□□ 1.38
CCS-208ENST00000533244 COL6A1P12109 1028 aa23.7■■□□□ 1.38
CCS-208ENST00000533244 ANO1Q5XXA6 986 aa23.7■■□□□ 1.38
CCS-208ENST00000533244 RUFY3Q7L099 469 aa23.7■■□□□ 1.38
CCS-208ENST00000533244 NECAB2Q7Z6G3 386 aa23.7■■□□□ 1.38
CCS-208ENST00000533244 SYTL5Q8TDW5 730 aaPredicted RBP23.7■■□□□ 1.38
CCS-208ENST00000533244 ZHX1Q9UKY1 873 aaPredicted RBP23.7■■□□□ 1.38
CCS-208ENST00000533244 NID2Q14112 1375 aa23.7■■□□□ 1.38
CCS-208ENST00000533244 EIF5BO60841 1220 aaKnown RBP23.69■■□□□ 1.38
CCS-208ENST00000533244 EDNRBP24530 442 aa23.69■■□□□ 1.38
CCS-208ENST00000533244 HSD17B4P51659 736 aa23.69■■□□□ 1.38
CCS-208ENST00000533244 CMTR1Q8N1G2 835 aaKnown RBP23.69■■□□□ 1.38
CCS-208ENST00000533244 SAMD3Q8N6K7 520 aa23.69■■□□□ 1.38
CCS-208ENST00000533244 BRF1Q92994 677 aa23.69■■□□□ 1.38
CCS-208ENST00000533244 RRP36Q96EU6 259 aaKnown RBP23.69■■□□□ 1.38
CCS-208ENST00000533244 RBM28Q9NW13 759 aaKnown RBP23.69■■□□□ 1.38
CCS-208ENST00000533244 COL20A1Q9P218 1284 aa23.69■■□□□ 1.38
CCS-208ENST00000533244 FAM184BQ9ULE4 1060 aa23.69■■□□□ 1.38
CCS-208ENST00000533244 DDX49Q9Y6V7 483 aaKnown RBP23.69■■□□□ 1.38
CCS-208ENST00000533244 RARBP10826 455 aa23.68■■□□□ 1.38
CCS-208ENST00000533244 IL17RAQ96F46 866 aa23.68■■□□□ 1.38
CCS-208ENST00000533244 FAM217BQ9NTX9 383 aaPredicted RBP23.68■■□□□ 1.38
CCS-208ENST00000533244 MAP3K20Q9NYL2 800 aaKnown RBP23.68■■□□□ 1.38
CCS-208ENST00000533244 DNM1LO00429 736 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 ADCY6O43306 1168 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 EVCP57679 992 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 ANAPC15P60006 121 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 FGD1P98174 961 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 APOBRQ0VD83 1088 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 FUT2Q10981 343 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 RTN1Q16799 776 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 CCDC144BQ3MJ40 725 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 C11orf49Q9H6J7 331 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 VTA1Q9NP79 307 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 CNTNAP5Q8WYK1 1306 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 GOLGA8AA7E2F4 631 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 GOLGA8BA8MQT2 603 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 ARRDC4Q8NCT1 418 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 PIBF1Q8WXW3 757 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 LENG1Q96BZ8 264 aaPredicted RBP23.67■■□□□ 1.38
CCS-208ENST00000533244 HTATIP2Q9BUP3 242 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 XPNPEP3Q9NQH7 507 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 CYP46A1Q9Y6A2 500 aa23.67■■□□□ 1.38
CCS-208ENST00000533244 ADAMTS4O75173 837 aa23.66■■□□□ 1.38
CCS-208ENST00000533244 DUSP11O75319 330 aaKnown RBP23.66■■□□□ 1.38
CCS-208ENST00000533244 SEC24BO95487 1268 aa23.66■■□□□ 1.38
CCS-208ENST00000533244 CFBP00751 764 aa23.66■■□□□ 1.38
CCS-208ENST00000533244 PPP2R5BQ15173 497 aa23.66■■□□□ 1.38
CCS-208ENST00000533244 LRRC41Q15345 812 aa23.66■■□□□ 1.38
CCS-208ENST00000533244 TAPT1Q6NXT6 567 aa23.66■■□□□ 1.38
CCS-208ENST00000533244 TAAR1Q96RJ0 339 aa23.66■■□□□ 1.38
CCS-208ENST00000533244 SEC63Q9UGP8 760 aaKnown RBP23.66■■□□□ 1.38
CCS-208ENST00000533244 ALPK3Q96L96 1907 aa23.65■■□□□ 1.38
CCS-208ENST00000533244 CDC27P30260 824 aa23.65■■□□□ 1.38
CCS-208ENST00000533244 TOB2Q14106 344 aaPredicted RBP23.65■■□□□ 1.38
CCS-208ENST00000533244 C8orf34Q49A92 452 aa23.65■■□□□ 1.38
CCS-208ENST00000533244 FBXO16Q8IX29 292 aaPredicted RBP23.65■■□□□ 1.38
CCS-208ENST00000533244 UPF3BQ9BZI7 483 aaKnown RBP23.65■■□□□ 1.38
CCS-208ENST00000533244 SYNRGQ9UMZ2 1314 aa23.64■■□□□ 1.38
CCS-208ENST00000533244 GJC2Q5T442 439 aaPredicted RBP23.64■■□□□ 1.37
CCS-208ENST00000533244 CCDC82Q8N4S0 544 aa23.64■■□□□ 1.37
CCS-208ENST00000533244 MPHOSPH6Q99547 160 aaKnown RBP23.64■■□□□ 1.37
CCS-208ENST00000533244 UPF3AQ9H1J1 476 aaKnown RBP23.64■■□□□ 1.37
CCS-208ENST00000533244 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.63■■□□□ 1.37
CCS-208ENST00000533244 RBM47A0AV96 593 aaKnown RBP23.63■■□□□ 1.37
CCS-208ENST00000533244 PGK1P00558 417 aa23.63■■□□□ 1.37
CCS-208ENST00000533244 ADCYAP1R1P41586 468 aa23.63■■□□□ 1.37
CCS-208ENST00000533244 METAP2P50579 478 aaKnown RBP eCLIP23.63■■□□□ 1.37
CCS-208ENST00000533244 NKX3-2P78367 333 aa23.63■■□□□ 1.37
CCS-208ENST00000533244 EEPD1Q7L9B9 569 aa23.63■■□□□ 1.37
CCS-208ENST00000533244 NSUN6Q8TEA1 469 aaKnown RBP23.63■■□□□ 1.37
CCS-208ENST00000533244 RMDN3Q96TC7 470 aa23.63■■□□□ 1.37
CCS-208ENST00000533244 PDGFCQ9NRA1 345 aa23.63■■□□□ 1.37
CCS-208ENST00000533244 GNEQ9Y223 722 aaKnown RBP23.63■■□□□ 1.37
CCS-208ENST00000533244 B4DLN1 442 aa23.62■■□□□ 1.37
CCS-208ENST00000533244 MRPL12P52815 198 aaKnown RBP23.62■■□□□ 1.37
CCS-208ENST00000533244 PDE4DQ08499 809 aa23.62■■□□□ 1.37
CCS-208ENST00000533244 IQSEC1Q6DN90 963 aa23.62■■□□□ 1.37
CCS-208ENST00000533244 KLHDC9Q8NEP7 349 aa23.62■■□□□ 1.37
CCS-208ENST00000533244 IWS1Q96ST2 819 aa23.62■■□□□ 1.37
CCS-208ENST00000533244 PXMP2Q9NR77 195 aa23.62■■□□□ 1.37
CCS-208ENST00000533244 CCDC196A0A1B0GTZ2 297 aa23.61■■□□□ 1.37
CCS-208ENST00000533244 hCG_1642624A0A1W2PR95 340 aa23.61■■□□□ 1.37
CCS-208ENST00000533244 KBTBD13C9JR72 458 aa23.61■■□□□ 1.37
CCS-208ENST00000533244 GCOM1H8Y6P7 765 aaPredicted RBP23.61■■□□□ 1.37
CCS-208ENST00000533244 POLR2MP0CAP2 368 aa23.61■■□□□ 1.37
CCS-208ENST00000533244 CST5P28325 142 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms