RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 UPF3BQ9BZI7 483 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 DDX20Q9UHI6 824 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 PCDHA1Q9Y5I3 950 aa16.18■□□□□ 0.18
TSPAN4-220ENST00000532375 NID2Q14112 1375 aa16.17■□□□□ 0.18
TSPAN4-220ENST00000532375 ARMCX2Q7L311 632 aa16.17■□□□□ 0.18
TSPAN4-220ENST00000532375 SYTL5Q8TDW5 730 aaPredicted RBP16.17■□□□□ 0.18
TSPAN4-220ENST00000532375 MRPL11Q9Y3B7 192 aaKnown RBP16.17■□□□□ 0.18
TSPAN4-220ENST00000532375 CYP46A1Q9Y6A2 500 aa16.17■□□□□ 0.18
TSPAN4-220ENST00000532375 LRRC37A2A6NM11 1700 aa16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 PTPDC1A2A3K4 754 aa16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 ADCY6O43306 1168 aa16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 TFRCP02786 760 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 EDNRBP24530 442 aa16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 ADD1P35611 737 aaKnown RBP16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 HSD17B4P51659 736 aa16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 MLLT1Q03111 559 aaPredicted RBP16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 ACVR2BQ13705 512 aa16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 RTN1Q16799 776 aa16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 SYNE3Q6ZMZ3 975 aa16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 ABHD16BQ9H3Z7 469 aa16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 CNTNAP5Q8WYK1 1306 aa16.16■□□□□ 0.18
TSPAN4-220ENST00000532375 LOC102724159A0A0B4J2E5 919 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 hCG_1642624A0A1W2PR95 340 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 ASB14A6NK59 587 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 CALML3P27482 149 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 CNGA1P29973 690 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 PDIA3P30101 505 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 ALDH5A1P51649 535 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 PWP2Q15269 919 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 NTRK3Q16288 839 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 PDE4DIPQ5VU43 2346 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 ANO1Q5XXA6 986 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 CCDC82Q8N4S0 544 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 ANKLE1Q8NAG6 615 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 PIBF1Q8WXW3 757 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 TAAR1Q96RJ0 339 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 ALDH8A1Q9H2A2 487 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 RBM28Q9NW13 759 aaKnown RBP16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
TSPAN4-220ENST00000532375 GOLGA8AA7E2F4 631 aa16.14■□□□□ 0.17
TSPAN4-220ENST00000532375 GOLGA8BA8MQT2 603 aa16.14■□□□□ 0.17
TSPAN4-220ENST00000532375 MSCO60682 206 aa16.14■□□□□ 0.17
TSPAN4-220ENST00000532375 PPP2R5BQ15173 497 aa16.14■□□□□ 0.17
TSPAN4-220ENST00000532375 TAPT1Q6NXT6 567 aa16.14■□□□□ 0.17
TSPAN4-220ENST00000532375 MCF2L2Q86YR7 1114 aa16.14■□□□□ 0.17
TSPAN4-220ENST00000532375 DNERQ8NFT8 737 aa16.14■□□□□ 0.17
TSPAN4-220ENST00000532375 DIS3LQ8TF46 1054 aaKnown RBP16.14■□□□□ 0.17
TSPAN4-220ENST00000532375 RRP36Q96EU6 259 aaKnown RBP16.14■□□□□ 0.17
TSPAN4-220ENST00000532375 CNPY2Q9Y2B0 182 aa16.14■□□□□ 0.17
TSPAN4-220ENST00000532375 EIF5BO60841 1220 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 FARP2O94887 1054 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 COL6A1P12109 1028 aa16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 FGD1P98174 961 aa16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 CCDC144BQ3MJ40 725 aa16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 TMEM63BQ5T3F8 832 aa16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 SAMD3Q8N6K7 520 aa16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 LENG1Q96BZ8 264 aaPredicted RBP16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 PAWRQ96IZ0 340 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 KIF2CQ99661 725 aa16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 LARP6Q9BRS8 491 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 PDGFCQ9NRA1 345 aa16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 MAP3K20Q9NYL2 800 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 ADD3Q9UEY8 706 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 ALPK3Q96L96 1907 aa16.13■□□□□ 0.17
TSPAN4-220ENST00000532375 RBM47A0AV96 593 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 ADAMTS4O75173 837 aa16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 CFBP00751 764 aa16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 AKR1A1P14550 325 aa16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 METAP2P50579 478 aaKnown RBP eCLIP16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 TRAF1Q13077 416 aa16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 TYW1BQ6NUM6 668 aa16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 ZNF274Q96GC6 653 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 PDRG1Q9NUG6 133 aa16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 ZHX1Q9UKY1 873 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 FAM184BQ9ULE4 1060 aa16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 V9GY48 417 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-220ENST00000532375 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-220ENST00000532375 MEIS2O14770 477 aa16.11■□□□□ 0.17
TSPAN4-220ENST00000532375 CTAGE5O15320 804 aa16.11■□□□□ 0.17
TSPAN4-220ENST00000532375 HOXA13P31271 388 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-220ENST00000532375 NKX3-2P78367 333 aa16.11■□□□□ 0.17
TSPAN4-220ENST00000532375 IRX5P78411 483 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-220ENST00000532375 GNEQ9Y223 722 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-220ENST00000532375 KIAA1217Q5T5P2 1943 aa16.11■□□□□ 0.17
TSPAN4-220ENST00000532375 DUSP11O75319 330 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 PTGS1P23219 599 aa16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 ADCYAP1R1P41586 468 aa16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 CCT2P78371 535 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 LRRC41Q15345 812 aa16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 PKN1Q16512 942 aa16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 WWC2Q6AWC2 1192 aa16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 CCSAPQ6IQ19 270 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 FBXO16Q8IX29 292 aaPredicted RBP16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 KLHDC9Q8NEP7 349 aa16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 NSUN6Q8TEA1 469 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 RMDN3Q96TC7 470 aa16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 NCOA5Q9HCD5 579 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-220ENST00000532375 VTA1Q9NP79 307 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms