RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 CNPY2Q9Y2B0 182 aa24.02■■□□□ 1.44
CCS-207ENST00000531990 V9GY48 417 aaPredicted RBP24.02■■□□□ 1.44
CCS-207ENST00000531990 KIAA0100Q14667 2235 aaKnown RBP24.02■■□□□ 1.44
CCS-207ENST00000531990 hCG_1642624A0A1W2PR95 340 aa24.01■■□□□ 1.43
CCS-207ENST00000531990 SOWAHBA6NEL2 793 aa24.01■■□□□ 1.43
CCS-207ENST00000531990 CPLX1O14810 134 aa24.01■■□□□ 1.43
CCS-207ENST00000531990 GJB1P08034 283 aa24.01■■□□□ 1.43
CCS-207ENST00000531990 CNGA1P29973 690 aa24.01■■□□□ 1.43
CCS-207ENST00000531990 AKAP17AQ02040 695 aaKnown RBP24.01■■□□□ 1.43
CCS-207ENST00000531990 FUT2Q10981 343 aa24.01■■□□□ 1.43
CCS-207ENST00000531990 CPLX2Q6PUV4 134 aaKnown RBP24.01■■□□□ 1.43
CCS-207ENST00000531990 FGD4Q96M96 766 aa24.01■■□□□ 1.43
CCS-207ENST00000531990 DEFB118Q96PH6 123 aa24.01■■□□□ 1.43
CCS-207ENST00000531990 BACH2Q9BYV9 841 aa24.01■■□□□ 1.43
CCS-207ENST00000531990 MAP3K20Q9NYL2 800 aaKnown RBP24.01■■□□□ 1.43
CCS-207ENST00000531990 RBM27Q9P2N5 1060 aaKnown RBP24.01■■□□□ 1.43
CCS-207ENST00000531990 LCTP09848 1927 aa24.01■■□□□ 1.43
CCS-207ENST00000531990 MCM3APO60318 1980 aa24■■□□□ 1.43
CCS-207ENST00000531990 LOC102724159A0A0B4J2E5 919 aa24■■□□□ 1.43
CCS-207ENST00000531990 B4DLN1 442 aa24■■□□□ 1.43
CCS-207ENST00000531990 CYBAP13498 195 aa24■■□□□ 1.43
CCS-207ENST00000531990 CCND3P30281 292 aaPredicted RBP24■■□□□ 1.43
CCS-207ENST00000531990 MRPL12P52815 198 aaKnown RBP24■■□□□ 1.43
CCS-207ENST00000531990 STK3Q13188 491 aa24■■□□□ 1.43
CCS-207ENST00000531990 PWP2Q15269 919 aaKnown RBP24■■□□□ 1.43
CCS-207ENST00000531990 ARMCX2Q7L311 632 aa24■■□□□ 1.43
CCS-207ENST00000531990 HEATR3Q7Z4Q2 680 aa24■■□□□ 1.43
CCS-207ENST00000531990 TBC1D5Q92609 795 aa24■■□□□ 1.43
CCS-207ENST00000531990 SLKQ9H2G2 1235 aaPredicted RBP24■■□□□ 1.43
CCS-207ENST00000531990 NCOA5Q9HCD5 579 aaKnown RBP24■■□□□ 1.43
CCS-207ENST00000531990 PAK6Q9NQU5 681 aaPredicted RBP24■■□□□ 1.43
CCS-207ENST00000531990 GCOM1H8Y6P7 765 aaPredicted RBP23.99■■□□□ 1.43
CCS-207ENST00000531990 POLR2MP0CAP2 368 aa23.99■■□□□ 1.43
CCS-207ENST00000531990 DNERQ8NFT8 737 aa23.99■■□□□ 1.43
CCS-207ENST00000531990 SYTL5Q8TDW5 730 aaPredicted RBP23.99■■□□□ 1.43
CCS-207ENST00000531990 PURBQ96QR8 312 aaKnown RBP23.99■■□□□ 1.43
CCS-207ENST00000531990 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.99■■□□□ 1.43
CCS-207ENST00000531990 TPCN1Q9ULQ1 816 aa23.99■■□□□ 1.43
CCS-207ENST00000531990 hCG_1984214I3L0E3 225 aa23.98■■□□□ 1.43
CCS-207ENST00000531990 MSCO60682 206 aa23.98■■□□□ 1.43
CCS-207ENST00000531990 CAPN2P17655 700 aa23.98■■□□□ 1.43
CCS-207ENST00000531990 ALDH5A1P51649 535 aaPredicted RBP23.98■■□□□ 1.43
CCS-207ENST00000531990 HSD17B4P51659 736 aa23.98■■□□□ 1.43
CCS-207ENST00000531990 PRAMEF19Q5SWL8 479 aa23.98■■□□□ 1.43
CCS-207ENST00000531990 NOL8Q76FK4 1167 aaKnown RBP23.98■■□□□ 1.43
CCS-207ENST00000531990 ZNF713Q8N859 430 aaPredicted RBP23.98■■□□□ 1.43
CCS-207ENST00000531990 U2AF1L4Q8WU68 220 aaKnown RBP23.98■■□□□ 1.43
CCS-207ENST00000531990 CUL5Q93034 780 aa23.98■■□□□ 1.43
CCS-207ENST00000531990 ABHD16BQ9H3Z7 469 aa23.98■■□□□ 1.43
CCS-207ENST00000531990 POTEFA5A3E0 1075 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 OPLAHO14841 1288 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 PRPF3O43395 683 aaKnown RBP23.97■■□□□ 1.43
CCS-207ENST00000531990 SGPL1O95470 568 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 SNAI1O95863 264 aaPredicted RBP23.97■■□□□ 1.43
CCS-207ENST00000531990 IFNAR1P17181 557 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 GJA8P48165 433 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 GHRHRQ02643 423 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 RABEP1Q15276 862 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 NTRK3Q16288 839 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 TRIM22Q8IYM9 498 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 TRPV1Q8NER1 839 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 GPKOWQ92917 476 aaPredicted RBP eCLIP23.97■■□□□ 1.436e-7■■□□□ 13.9
CCS-207ENST00000531990 KIF2CQ99661 725 aa23.97■■□□□ 1.43
CCS-207ENST00000531990 RNF26Q9BY78 433 aaPredicted RBP23.97■■□□□ 1.43
CCS-207ENST00000531990 ZHX1Q9UKY1 873 aaPredicted RBP23.97■■□□□ 1.43
CCS-207ENST00000531990 SEPT4O43236 478 aa23.96■■□□□ 1.43
CCS-207ENST00000531990 PFKFB2O60825 505 aa23.96■■□□□ 1.43
CCS-207ENST00000531990 PPP1R18Q6NYC8 613 aa23.96■■□□□ 1.43
CCS-207ENST00000531990 IL27Q8NEV9 243 aa23.96■■□□□ 1.43
CCS-207ENST00000531990 NSUN6Q8TEA1 469 aaKnown RBP23.96■■□□□ 1.43
CCS-207ENST00000531990 PHKBQ93100 1093 aa23.96■■□□□ 1.43
CCS-207ENST00000531990 TBC1D32Q96NH3 1257 aa23.96■■□□□ 1.43
CCS-207ENST00000531990 RMDN3Q96TC7 470 aa23.96■■□□□ 1.43
CCS-207ENST00000531990 SLC26A6Q9BXS9 759 aa23.96■■□□□ 1.43
CCS-207ENST00000531990 DDX20Q9UHI6 824 aaKnown RBP23.96■■□□□ 1.43
CCS-207ENST00000531990 ASTN1O14525 1302 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 CDKL5O76039 1030 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 TFRCP02786 760 aaKnown RBP23.95■■□□□ 1.42
CCS-207ENST00000531990 SCG2P13521 617 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 HOXA13P31271 388 aaPredicted RBP23.95■■□□□ 1.42
CCS-207ENST00000531990 NAPAP54920 295 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 PDE4DQ08499 809 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 SSRP1Q08945 709 aaKnown RBP23.95■■□□□ 1.42
CCS-207ENST00000531990 ACVR2BQ13705 512 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 PFKFB3Q16875 520 aaPredicted RBP23.95■■□□□ 1.42
CCS-207ENST00000531990 ARHGEF16Q5VV41 709 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 WWC2Q6AWC2 1192 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 SMARCC2Q8TAQ2 1214 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 TAAR1Q96RJ0 339 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 PSTPIP2Q9H939 334 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 COL20A1Q9P218 1284 aa23.95■■□□□ 1.42
CCS-207ENST00000531990 ZNF865P0CJ78 1059 aaPredicted RBP23.94■■□□□ 1.42
CCS-207ENST00000531990 SCRN1Q12765 414 aa23.94■■□□□ 1.42
CCS-207ENST00000531990 MORC4Q8TE76 937 aa23.94■■□□□ 1.42
CCS-207ENST00000531990 BARHL2Q9NY43 387 aa23.94■■□□□ 1.42
CCS-207ENST00000531990 ST18O60284 1047 aa23.93■■□□□ 1.42
CCS-207ENST00000531990 AKR1A1P14550 325 aa23.93■■□□□ 1.42
CCS-207ENST00000531990 EN2P19622 333 aaPredicted RBP23.93■■□□□ 1.42
CCS-207ENST00000531990 FCHSD1Q86WN1 690 aa23.93■■□□□ 1.42
CCS-207ENST00000531990 CCDC12Q8WUD4 166 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms