RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	SYNE4	Q8N205	404 aa		7.64	□□□□□ -1.19
PUM1-222	ENST00000531867	GPBAR1	Q8TDU6	330 aa		7.64	□□□□□ -1.19
PUM1-222	ENST00000531867	MRRF	Q96E11	262 aa	Known RBP	7.64	□□□□□ -1.19
PUM1-222	ENST00000531867	LGR6	Q9HBX8	967 aa		7.64	□□□□□ -1.19
PUM1-222	ENST00000531867	RNMT	O43148	476 aa	Known RBP	7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	CAMTA2	O94983	1202 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	CELA3A	P09093	270 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	FOSL1	P15407	271 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	SPINK2	P20155	84 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	BMP6	P22004	513 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	IL6ST	P40189	918 aa	Predicted RBP	7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	ST5	P78524	1137 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	DUSP27	Q5VZP5	1158 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	PCNX4	Q63HM2	1172 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	OLFM4	Q6UX06	510 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	SMYD4	Q8IYR2	804 aa	Predicted RBP	7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	GATA6	Q92908	595 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	DISC1	Q9NRI5	854 aa		7.63	□□□□□ -1.19
PUM1-222	ENST00000531867	FAM155A	B1AL88	458 aa	Predicted RBP	7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	PAGE1	O75459	146 aa		7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	CELF2	O95319	508 aa	Known RBP	7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	STARD3NL	O95772	234 aa		7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	ADM	P35318	185 aa		7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	TTLL4	Q14679	1199 aa		7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	ZC3H12A	Q5D1E8	599 aa	Known RBP	7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	SEZ6L2	Q6UXD5	910 aa		7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	DTX1	Q86Y01	620 aa		7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	RNF214	Q8ND24	703 aa		7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	JDP2	Q8WYK2	163 aa		7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	AKAP11	Q9UKA4	1901 aa		7.62	□□□□□ -1.19
PUM1-222	ENST00000531867	RNGTT	O60942	597 aa	Known RBP	7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	TCF3	P15923	654 aa		7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	ALDH1B1	P30837	517 aa		7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	EIF6	P56537	245 aa	Known RBP	7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	PSMD2	Q13200	908 aa		7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	CLEC4G	Q6UXB4	293 aa		7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	CTU1	Q7Z7A3	348 aa	Known RBP	7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	SREK1	Q8WXA9	508 aa	Known RBP	7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	DRC1	Q96MC2	740 aa		7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	C1GALT1	Q9NS00	363 aa		7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	ADARB2	Q9NS39	739 aa	Known RBP	7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	PCOLCE2	Q9UKZ9	415 aa		7.61	□□□□□ -1.19
PUM1-222	ENST00000531867	FAM170B	A6NMN3	283 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	CYP26A1	O43174	497 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	MED26	O95402	600 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	HCLS1	P14317	486 aa	Predicted RBP	7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	FXR1	P51114	621 aa	Known RBP eCLIP	7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	RPS26	P62854	115 aa	Known RBP	7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	DAB2	P98082	770 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	CCDC85B	Q15834	202 aa	Predicted RBP	7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	CRY2	Q49AN0	593 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	CYP27C1	Q4G0S4	372 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	SULT6B1	Q6IMI4	303 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	FBXO33	Q7Z6M2	555 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	GRIN3A	Q8TCU5	1115 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	TEX13A	Q9BXU3	409 aa	Predicted RBP	7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	GLIS2	Q9BZE0	524 aa	Predicted RBP	7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	PICK1	Q9NRD5	415 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	RNF186	Q9NXI6	227 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	GPRC5D	Q9NZD1	345 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	PARP2	Q9UGN5	583 aa		7.6	□□□□□ -1.19
PUM1-222	ENST00000531867	HEG1	Q9ULI3	1381 aa		7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	SIPA1L3	O60292	1781 aa	Predicted RBP	7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	DYNC1LI2	O43237	492 aa	Predicted RBP	7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	NCL	P19338	710 aa	Known RBP	7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	IL13	P35225	146 aa		7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	PKN2	Q16513	984 aa	Known RBP	7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	TTBK2	Q6IQ55	1244 aa		7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	OGFOD3	Q6PK18	319 aa		7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	ZNF765	Q7L2R6	523 aa		7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	TMC4	Q7Z404	712 aa		7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	ZNF496	Q96IT1	587 aa	Predicted RBP	7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	SSU72	Q9NP77	194 aa	Known RBP	7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	KIAA1522	Q9P206	1035 aa	Predicted RBP	7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	PCDHA4	Q9UN74	947 aa		7.59	□□□□□ -1.19
PUM1-222	ENST00000531867	NEFM	P07197	916 aa		7.58	□□□□□ -1.2
PUM1-222	ENST00000531867	RLBP1	P12271	317 aa		7.58	□□□□□ -1.2
PUM1-222	ENST00000531867	MSMP	Q1L6U9	139 aa		7.58	□□□□□ -1.2
PUM1-222	ENST00000531867	CDC37L1	Q7L3B6	337 aa		7.58	□□□□□ -1.2
PUM1-222	ENST00000531867	NBPF5P	Q86XG9	351 aa	Predicted RBP	7.58	□□□□□ -1.2
PUM1-222	ENST00000531867	ELMO3	Q96BJ8	720 aa		7.58	□□□□□ -1.2
PUM1-222	ENST00000531867	VPS33B	Q9H267	617 aa		7.58	□□□□□ -1.2
PUM1-222	ENST00000531867	KIF7	Q2M1P5	1343 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	CDHR2	Q9BYE9	1310 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	NPHP1	O15259	732 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	FANCG	O15287	622 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	A1BG	P04217	495 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	HOXA10	P31260	410 aa	Predicted RBP	7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	TNNT2	P45379	298 aa	Predicted RBP	7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	ST13	P50502	369 aa	Known RBP	7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	HUNK	P57058	714 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	KIF23	Q02241	960 aa	Predicted RBP	7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	RGMB	Q6NW40	437 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	ZNF790	Q6PG37	636 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	SHISA5	Q8N114	240 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	KCT2	Q8NC54	265 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	ISL2	Q96A47	359 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	CRELD1	Q96HD1	420 aa		7.57	□□□□□ -1.2
PUM1-222	ENST00000531867	POLR3GL	Q9BT43	218 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms