RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 HAUS4Q9H6D7 363 aa18.86■□□□□ 0.61
VPS26B-206ENST00000531741 DAGLAQ9Y4D2 1042 aa18.86■□□□□ 0.61
VPS26B-206ENST00000531741 IGKV6D-41A0A0C4DH26 115 aa18.86■□□□□ 0.61
VPS26B-206ENST00000531741 TECP42680 631 aa18.86■□□□□ 0.61
VPS26B-206ENST00000531741 ASIC1P78348 528 aa18.86■□□□□ 0.61
VPS26B-206ENST00000531741 FIGNQ5HY92 759 aa18.86■□□□□ 0.61
VPS26B-206ENST00000531741 PPP1R18Q6NYC8 613 aa18.86■□□□□ 0.61
VPS26B-206ENST00000531741 ZSCAN29Q8IWY8 852 aaPredicted RBP18.86■□□□□ 0.61
VPS26B-206ENST00000531741 MSANTD4Q8NCY6 345 aa18.86■□□□□ 0.61
VPS26B-206ENST00000531741 CHP1Q99653 195 aa18.86■□□□□ 0.61
VPS26B-206ENST00000531741 SLF1Q9BQI6 1058 aa18.86■□□□□ 0.61
VPS26B-206ENST00000531741 REXO2Q9Y3B8 237 aaKnown RBP18.86■□□□□ 0.61
VPS26B-206ENST00000531741 WDR59Q6PJI9 974 aa18.85■□□□□ 0.61
VPS26B-206ENST00000531741 PKNOX2Q96KN3 472 aa18.85■□□□□ 0.61
VPS26B-206ENST00000531741 EPC1Q9H2F5 836 aa18.85■□□□□ 0.61
VPS26B-206ENST00000531741 RAB21Q9UL25 225 aa18.85■□□□□ 0.61
VPS26B-206ENST00000531741 PVALEFA0A1B0GWK0 134 aa18.85■□□□□ 0.61
VPS26B-206ENST00000531741 ONECUT3O60422 494 aaPredicted RBP18.85■□□□□ 0.61
VPS26B-206ENST00000531741 AMPD2Q01433 879 aa18.85■□□□□ 0.61
VPS26B-206ENST00000531741 STK4Q13043 487 aa18.85■□□□□ 0.61
VPS26B-206ENST00000531741 PDIA5Q14554 519 aa18.85■□□□□ 0.61
VPS26B-206ENST00000531741 ANKRD40Q6AI12 368 aa18.85■□□□□ 0.61
VPS26B-206ENST00000531741 ERGIC2Q96RQ1 377 aa18.85■□□□□ 0.61
VPS26B-206ENST00000531741 A0A1W2PQJ5 194 aa18.84■□□□□ 0.61
VPS26B-206ENST00000531741 B4DLN1 442 aa18.84■□□□□ 0.61
VPS26B-206ENST00000531741 SEC31AO94979 1220 aaKnown RBP18.84■□□□□ 0.61
VPS26B-206ENST00000531741 TUBBP07437 444 aa18.84■□□□□ 0.61
VPS26B-206ENST00000531741 ADCY7P51828 1080 aa18.84■□□□□ 0.61
VPS26B-206ENST00000531741 CDK17Q00537 523 aa18.84■□□□□ 0.61
VPS26B-206ENST00000531741 CENPPQ6IPU0 288 aa18.84■□□□□ 0.61
VPS26B-206ENST00000531741 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
VPS26B-206ENST00000531741 GJD4Q96KN9 370 aaPredicted RBP18.84■□□□□ 0.61
VPS26B-206ENST00000531741 BIN2Q9UBW5 565 aaPredicted RBP18.84■□□□□ 0.61
VPS26B-206ENST00000531741 PSMD14O00487 310 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 ABL1P00519 1130 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 KRT83P78385 493 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 ZBED6P86452 979 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 CALCRLQ16602 461 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 FOXR2Q6PJQ5 311 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 SV2BQ7L1I2 683 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 ZNF771Q7L3S4 317 aaPredicted RBP18.83■□□□□ 0.61
VPS26B-206ENST00000531741 CCDC170Q8IYT3 715 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 CNOT6LQ96LI5 555 aaKnown RBP18.83■□□□□ 0.61
VPS26B-206ENST00000531741 RAB34Q9BZG1 259 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 ANKZF1Q9H8Y5 726 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 VAT1LQ9HCJ6 419 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 ABCB11O95342 1321 aa18.83■□□□□ 0.61
VPS26B-206ENST00000531741 SASH3O75995 380 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 GRB10Q13322 594 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 TMEM266Q2M3C6 531 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 MIIPQ5JXC2 388 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 UNC13DQ70J99 1090 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 SP8Q8IXZ3 490 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 MSL3Q8N5Y2 521 aaKnown RBP18.83■□□□□ 0.6
VPS26B-206ENST00000531741 FUT8Q9BYC5 575 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 COA1Q9GZY4 146 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 UBA5Q9GZZ9 404 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 BLOC1S4Q9NUP1 217 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 SWAP70Q9UH65 585 aa18.83■□□□□ 0.6
VPS26B-206ENST00000531741 RASSF10A6NK89 507 aa18.82■□□□□ 0.6
VPS26B-206ENST00000531741 TBC1D8BQ0IIM8 1120 aa18.82■□□□□ 0.6
VPS26B-206ENST00000531741 KIAA0895Q8NCT3 520 aa18.82■□□□□ 0.6
VPS26B-206ENST00000531741 EHBP1Q8NDI1 1231 aa18.82■□□□□ 0.6
VPS26B-206ENST00000531741 ST7Q9NRC1 585 aa18.82■□□□□ 0.6
VPS26B-206ENST00000531741 LRWD1Q9UFC0 647 aa18.82■□□□□ 0.6
VPS26B-206ENST00000531741 PES1O00541 588 aaKnown RBP18.81■□□□□ 0.6
VPS26B-206ENST00000531741 FCER1AP12319 257 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 TRIM21P19474 475 aaKnown RBP18.81■□□□□ 0.6
VPS26B-206ENST00000531741 CYLC1P35663 651 aaPredicted RBP18.81■□□□□ 0.6
VPS26B-206ENST00000531741 SLC27A3Q5K4L6 730 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 PPP4R3AQ6IN85 833 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 LRRC27Q9C0I9 530 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 RIC8AQ9NPQ8 531 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 ZNHIT6Q9NWK9 470 aaKnown RBP18.81■□□□□ 0.6
VPS26B-206ENST00000531741 TMEM260Q9NX78 707 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 PUF60Q9UHX1 559 aaKnown RBP18.81■□□□□ 0.6
VPS26B-206ENST00000531741 ZHX1Q9UKY1 873 aaPredicted RBP18.81■□□□□ 0.6
VPS26B-206ENST00000531741 MYO6Q9UM54 1294 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 GREB1LQ9C091 1923 aaPredicted RBP18.81■□□□□ 0.6
VPS26B-206ENST00000531741 PNMA6FA0A0J9YX94 578 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 CTAGE15A4D2H0 777 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 EDIL3O43854 480 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 TTLL1O95922 423 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 CTAGE8P0CG41 777 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 TXKP42681 527 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 HERVK_113P62684 666 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 ZNF543Q08ER8 600 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 LONRF2Q1L5Z9 754 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 CTAGE6Q86UF2 777 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 CTAGE4Q8IX94 777 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 LARP4BQ92615 738 aaKnown RBP18.81■□□□□ 0.6
VPS26B-206ENST00000531741 PNMA5Q96PV4 448 aa18.81■□□□□ 0.6
VPS26B-206ENST00000531741 EIF3CLB5ME19 914 aaKnown RBP18.8■□□□□ 0.6
VPS26B-206ENST00000531741 C6orf229H3BNL8 230 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 MAP2K7O14733 419 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 AKR1B1P15121 316 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 MTIF2P46199 727 aaKnown RBP18.8■□□□□ 0.6
VPS26B-206ENST00000531741 FRMPD2Q68DX3 1309 aaPredicted RBP18.8■□□□□ 0.6
VPS26B-206ENST00000531741 TRAPPC11Q7Z392 1133 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 GUF1Q8N442 669 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms