RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 SLC5A4Q9NY91 659 aa13.51□□□□□ -0.25
ACER3-210ENST00000531352 V9GY48 417 aaPredicted RBP13.51□□□□□ -0.25
ACER3-210ENST00000531352 ABCB11O95342 1321 aa13.51□□□□□ -0.25
ACER3-210ENST00000531352 NID2Q14112 1375 aa13.51□□□□□ -0.25
ACER3-210ENST00000531352 UBXN2AP68543 259 aa13.51□□□□□ -0.25
ACER3-210ENST00000531352 ME3Q16798 604 aa13.51□□□□□ -0.25
ACER3-210ENST00000531352 RNF207Q6ZRF8 634 aa13.51□□□□□ -0.25
ACER3-210ENST00000531352 TRMT44Q8IYL2 757 aaKnown RBP13.51□□□□□ -0.25
ACER3-210ENST00000531352 PHKBQ93100 1093 aa13.51□□□□□ -0.25
ACER3-210ENST00000531352 ZNF274Q96GC6 653 aaPredicted RBP13.51□□□□□ -0.25
ACER3-210ENST00000531352 PFASO15067 1338 aa13.5□□□□□ -0.25
ACER3-210ENST00000531352 RBBP6Q7Z6E9 1792 aaKnown RBP13.5□□□□□ -0.25
ACER3-210ENST00000531352 ADAMTS3O15072 1205 aa13.5□□□□□ -0.25
ACER3-210ENST00000531352 SNAI1O95863 264 aaPredicted RBP13.5□□□□□ -0.25
ACER3-210ENST00000531352 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
ACER3-210ENST00000531352 MAMDC4Q6UXC1 1216 aa13.5□□□□□ -0.25
ACER3-210ENST00000531352 GPKOWQ92917 476 aaPredicted RBP eCLIP13.5□□□□□ -0.25
ACER3-210ENST00000531352 SHISA4Q96DD7 197 aa13.5□□□□□ -0.25
ACER3-210ENST00000531352 PAK6Q9NQU5 681 aaPredicted RBP13.5□□□□□ -0.25
ACER3-210ENST00000531352 PNMA2Q9UL42 364 aa13.5□□□□□ -0.25
ACER3-210ENST00000531352 MRPL11Q9Y3B7 192 aaKnown RBP13.5□□□□□ -0.25
ACER3-210ENST00000531352 RPTORQ8N122 1335 aa13.5□□□□□ -0.25
ACER3-210ENST00000531352 CFBP00751 764 aa13.49□□□□□ -0.25
ACER3-210ENST00000531352 CYBAP13498 195 aa13.49□□□□□ -0.25
ACER3-210ENST00000531352 HOXA13P31271 388 aaPredicted RBP13.49□□□□□ -0.25
ACER3-210ENST00000531352 SCRN1Q12765 414 aa13.49□□□□□ -0.25
ACER3-210ENST00000531352 PPP2R5BQ15173 497 aa13.49□□□□□ -0.25
ACER3-210ENST00000531352 MFSD14CQ5VZR4 134 aa13.49□□□□□ -0.25
ACER3-210ENST00000531352 RGS22Q8NE09 1264 aa13.49□□□□□ -0.25
ACER3-210ENST00000531352 SYTL5Q8TDW5 730 aaPredicted RBP13.49□□□□□ -0.25
ACER3-210ENST00000531352 DEFB118Q96PH6 123 aa13.49□□□□□ -0.25
ACER3-210ENST00000531352 HMX1Q9NP08 348 aaPredicted RBP13.49□□□□□ -0.25
ACER3-210ENST00000531352 EN2P19622 333 aaPredicted RBP13.49□□□□□ -0.25
ACER3-210ENST00000531352 ZNF467Q7Z7K2 595 aaPredicted RBP13.49□□□□□ -0.25
ACER3-210ENST00000531352 TAAR1Q96RJ0 339 aa13.49□□□□□ -0.25
ACER3-210ENST00000531352 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.49□□□□□ -0.25
ACER3-210ENST00000531352 SEC63Q9UGP8 760 aaKnown RBP13.49□□□□□ -0.25
ACER3-210ENST00000531352 CCDC196A0A1B0GTZ2 297 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 CTDNEP1O95476 244 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 PKN1Q16512 942 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 ANO1Q5XXA6 986 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 WWC2Q6AWC2 1192 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 ARMCX2Q7L311 632 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 AIFM3Q96NN9 605 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 KATNBL1Q9H079 304 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 GJB1P08034 283 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 ZNF865P0CJ78 1059 aaPredicted RBP13.48□□□□□ -0.25
ACER3-210ENST00000531352 IFNAR1P17181 557 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 ALDH5A1P51649 535 aaPredicted RBP13.48□□□□□ -0.25
ACER3-210ENST00000531352 HSD17B4P51659 736 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 GHRHRQ02643 423 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 LHX8Q68G74 356 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
ACER3-210ENST00000531352 UPF2Q9HAU5 1272 aaKnown RBP13.48□□□□□ -0.25
ACER3-210ENST00000531352 SYNGAP1Q96PV0 1343 aa13.47□□□□□ -0.25
ACER3-210ENST00000531352 MEIS2O14770 477 aa13.47□□□□□ -0.25
ACER3-210ENST00000531352 PFKFB2O60825 505 aa13.47□□□□□ -0.25
ACER3-210ENST00000531352 CNGA1P29973 690 aa13.47□□□□□ -0.25
ACER3-210ENST00000531352 USP17L6PQ6QN14 398 aa13.47□□□□□ -0.25
ACER3-210ENST00000531352 EEPD1Q7L9B9 569 aa13.47□□□□□ -0.25
ACER3-210ENST00000531352 HEATR3Q7Z4Q2 680 aa13.47□□□□□ -0.25
ACER3-210ENST00000531352 MCF2L2Q86YR7 1114 aa13.47□□□□□ -0.25
ACER3-210ENST00000531352 U2AF1L4Q8WU68 220 aaKnown RBP13.47□□□□□ -0.25
ACER3-210ENST00000531352 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.47□□□□□ -0.25
ACER3-210ENST00000531352 FRMPD3Q5JV73 1810 aa13.47□□□□□ -0.25
ACER3-210ENST00000531352 ADCY6O43306 1168 aa13.46□□□□□ -0.25
ACER3-210ENST00000531352 ANKRD1Q15327 319 aa13.46□□□□□ -0.25
ACER3-210ENST00000531352 TMEM63BQ5T3F8 832 aa13.46□□□□□ -0.25
ACER3-210ENST00000531352 LENG1Q96BZ8 264 aaPredicted RBP13.46□□□□□ -0.25
ACER3-210ENST00000531352 SLC26A6Q9BXS9 759 aa13.46□□□□□ -0.25
ACER3-210ENST00000531352 GJB4Q9NTQ9 266 aa13.46□□□□□ -0.25
ACER3-210ENST00000531352 STXBP3O00186 592 aa13.46□□□□□ -0.26
ACER3-210ENST00000531352 PRPF3O43395 683 aaKnown RBP13.46□□□□□ -0.26
ACER3-210ENST00000531352 JAK2O60674 1132 aa13.46□□□□□ -0.26
ACER3-210ENST00000531352 SGPL1O95470 568 aa13.46□□□□□ -0.26
ACER3-210ENST00000531352 PTGS1P23219 599 aa13.46□□□□□ -0.26
ACER3-210ENST00000531352 GJA8P48165 433 aa13.46□□□□□ -0.26
ACER3-210ENST00000531352 ACVR2BQ13705 512 aa13.46□□□□□ -0.26
ACER3-210ENST00000531352 PFKFB3Q16875 520 aaPredicted RBP13.46□□□□□ -0.26
ACER3-210ENST00000531352 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.26
ACER3-210ENST00000531352 MSL3Q8N5Y2 521 aaKnown RBP13.46□□□□□ -0.26
ACER3-210ENST00000531352 MORC4Q8TE76 937 aa13.46□□□□□ -0.26
ACER3-210ENST00000531352 RMDN3Q96TC7 470 aa13.46□□□□□ -0.26
ACER3-210ENST00000531352 SLKQ9H2G2 1235 aaPredicted RBP13.46□□□□□ -0.26
ACER3-210ENST00000531352 LRRC37A2A6NM11 1700 aa13.45□□□□□ -0.26
ACER3-210ENST00000531352 GCOM1H8Y6P7 765 aaPredicted RBP13.45□□□□□ -0.26
ACER3-210ENST00000531352 POLR2MP0CAP2 368 aa13.45□□□□□ -0.26
ACER3-210ENST00000531352 EDNRBP24530 442 aa13.45□□□□□ -0.26
ACER3-210ENST00000531352 DNERQ8NFT8 737 aa13.45□□□□□ -0.26
ACER3-210ENST00000531352 RNF26Q9BY78 433 aaPredicted RBP13.45□□□□□ -0.26
ACER3-210ENST00000531352 ABHD16BQ9H3Z7 469 aa13.45□□□□□ -0.26
ACER3-210ENST00000531352 PDGFCQ9NRA1 345 aa13.45□□□□□ -0.26
ACER3-210ENST00000531352 BARHL2Q9NY43 387 aa13.45□□□□□ -0.26
ACER3-210ENST00000531352 ADD3Q9UEY8 706 aaKnown RBP13.45□□□□□ -0.26
ACER3-210ENST00000531352 ZHX1Q9UKY1 873 aaPredicted RBP13.45□□□□□ -0.26
ACER3-210ENST00000531352 CNPY2Q9Y2B0 182 aa13.45□□□□□ -0.26
ACER3-210ENST00000531352 PDE4DIPQ5VU43 2346 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 ASB14A6NK59 587 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 SEPT4O43236 478 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 SCG2P13521 617 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms