RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, human

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP3-219	ENST00000530990	MSL3	Q8N5Y2	521 aa	Known RBP	13.76	□□□□□ -0.21
LTBP3-219	ENST00000530990	TBC1D5	Q92609	795 aa		13.76	□□□□□ -0.21
LTBP3-219	ENST00000530990	RRP36	Q96EU6	259 aa	Known RBP	13.76	□□□□□ -0.21
LTBP3-219	ENST00000530990	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.76	□□□□□ -0.21
LTBP3-219	ENST00000530990	PDRG1	Q9NUG6	133 aa		13.76	□□□□□ -0.21
LTBP3-219	ENST00000530990	MRPL11	Q9Y3B7	192 aa	Known RBP	13.76	□□□□□ -0.21
LTBP3-219	ENST00000530990	KIAA1217	Q5T5P2	1943 aa		13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	hCG_1642624	A0A1W2PR95	340 aa		13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	SNAI1	O95863	264 aa	Predicted RBP	13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	ALDH5A1	P51649	535 aa	Predicted RBP	13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	EVC	P57679	992 aa		13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	FUT2	Q10981	343 aa		13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	LARP6	Q9BRS8	491 aa	Known RBP	13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	CRISPLD2	Q9H0B8	497 aa		13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	SEC63	Q9UGP8	760 aa	Known RBP	13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	DDX20	Q9UHI6	824 aa	Known RBP	13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	NRBP1	Q9UHY1	535 aa		13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	CNPY2	Q9Y2B0	182 aa		13.75	□□□□□ -0.21
LTBP3-219	ENST00000530990	ALPK3	Q96L96	1907 aa		13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	MKI67	P46013	3256 aa	Known RBP	13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	ASB14	A6NK59	587 aa		13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	SEPT4	O43236	478 aa		13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	CFB	P00751	764 aa		13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	LHX8	Q68G74	356 aa		13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	MCF2L2	Q86YR7	1114 aa		13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	RGS22	Q8NE09	1264 aa		13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	COL20A1	Q9P218	1284 aa		13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.74	□□□□□ -0.21
LTBP3-219	ENST00000530990	TFRC	P02786	760 aa	Known RBP	13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	PDIA3	P30101	505 aa	Known RBP	13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	ADD1	P35611	737 aa	Known RBP	13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	HSD17B4	P51659	736 aa		13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	GHRHR	Q02643	423 aa		13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	TRAF1	Q13077	416 aa		13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	ANO1	Q5XXA6	986 aa		13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	LENG1	Q96BZ8	264 aa	Predicted RBP	13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	KATNBL1	Q9H079	304 aa		13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	ADD3	Q9UEY8	706 aa	Known RBP	13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	OGDHL	Q9ULD0	1010 aa		13.73	□□□□□ -0.21
LTBP3-219	ENST00000530990	MSC	O60682	206 aa		13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	HOXA13	P31271	388 aa	Predicted RBP	13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	AK2	P54819	239 aa		13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	CCT2	P78371	535 aa	Known RBP	13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	ACVR2B	Q13705	512 aa		13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	PPP2R5B	Q15173	497 aa		13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	FBXO16	Q8IX29	292 aa	Predicted RBP	13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	DNER	Q8NFT8	737 aa		13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	MORC4	Q8TE76	937 aa		13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	DIS3L	Q8TF46	1054 aa	Known RBP	13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	TAAR1	Q96RJ0	339 aa		13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	MAF1	Q9H063	256 aa		13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	ABHD16B	Q9H3Z7	469 aa		13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	NCOA5	Q9HCD5	579 aa	Known RBP	13.72	□□□□□ -0.21
LTBP3-219	ENST00000530990	CCDC196	A0A1B0GTZ2	297 aa		13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	ADCY6	O43306	1168 aa		13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	FARP2	O94887	1054 aa	Predicted RBP	13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	AKR1A1	P14550	325 aa		13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	EDNRB	P24530	442 aa		13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	MNX1	P50219	401 aa	Predicted RBP	13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	STK3	Q13188	491 aa		13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	WWC2	Q6AWC2	1192 aa		13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	NOL8	Q76FK4	1167 aa	Known RBP	13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	EEPD1	Q7L9B9	569 aa		13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	HEATR3	Q7Z4Q2	680 aa		13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	C22orf23	Q9BZE7	217 aa		13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990		V9GY48	417 aa	Predicted RBP	13.71	□□□□□ -0.21
LTBP3-219	ENST00000530990	LOC102724159	A0A0B4J2E5	919 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	PPFIA3	O75145	1194 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	POLR2M	P0CAP2	368 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	EIF2AK2	P19525	551 aa	Known RBP	13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	RBM25	P49756	843 aa	Known RBP	13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	NEK4	P51957	841 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	PWP2	Q15269	919 aa	Known RBP	13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	NTRK3	Q16288	839 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	CCDC144B	Q3MJ40	725 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	PRPF38B	Q5VTL8	546 aa	Known RBP	13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	TYW1B	Q6NUM6	668 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	UBE2Q1	Q7Z7E8	422 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	PHKB	Q93100	1093 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	ZNF274	Q96GC6	653 aa	Predicted RBP	13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	RMDN3	Q96TC7	470 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	KIF2C	Q99661	725 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	PXMP2	Q9NR77	195 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	MAP3K20	Q9NYL2	800 aa	Known RBP	13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	TPCN1	Q9ULQ1	816 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	PDE4DIP	Q5VU43	2346 aa		13.7	□□□□□ -0.22
LTBP3-219	ENST00000530990	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.69	□□□□□ -0.22
LTBP3-219	ENST00000530990	LARGE1	O95461	756 aa		13.69	□□□□□ -0.22
LTBP3-219	ENST00000530990	RARB	P10826	455 aa		13.69	□□□□□ -0.22
LTBP3-219	ENST00000530990	ADCYAP1R1	P41586	468 aa		13.69	□□□□□ -0.22
LTBP3-219	ENST00000530990	PDE4D	Q08499	809 aa		13.69	□□□□□ -0.22
LTBP3-219	ENST00000530990	ANKRD1	Q15327	319 aa		13.69	□□□□□ -0.22
LTBP3-219	ENST00000530990	FCHSD1	Q86WN1	690 aa		13.69	□□□□□ -0.22
LTBP3-219	ENST00000530990	SAMD3	Q8N6K7	520 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms