RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 PAXIP1Q6ZW49 1069 aaPredicted RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 DIS3L2Q8IYB7 885 aaKnown RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 CPXCR1Q8N123 301 aa11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 ZNF454Q8N9F8 522 aa11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 CCDC12Q8WUD4 166 aaPredicted RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 TNPO1Q92973 898 aaKnown RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 CHAMP1Q96JM3 812 aa11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 SLC38A10Q9HBR0 1119 aa11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 RAVER2Q9HCJ3 691 aaKnown RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 ZNF536O15090 1300 aa11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 SMCO2A6NFE2 343 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 BTBD18B2RXH4 712 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 BTBD19C9JJ37 291 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 SLC10A3P09131 477 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 OSBPP22059 807 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 CALML3P27482 149 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 KRT2P35908 639 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 GRM1Q13255 1194 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 NR5A1Q13285 461 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 PABPC4Q13310 644 aaKnown RBP eCLIP11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 NPY5RQ15761 445 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 PPP1R18Q6NYC8 613 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 Q6ZNB5 142 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 P2RX7Q99572 595 aaKnown RBP11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 ASCC2Q9H1I8 757 aaPredicted RBP11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 BRMS1Q9HCU9 246 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 CCPG1Q9ULG6 757 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 PCDHA4Q9UN74 947 aa11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 RBBP6Q7Z6E9 1792 aaKnown RBP11.47□□□□□ -0.57
RPUSD4-205ENST00000530903 FAM155AB1AL88 458 aaPredicted RBP11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 ICAM1P05362 532 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 ADCY7P51828 1080 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 GLIPR1L2Q4G1C9 344 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 FAM173BQ6P4H8 233 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 BLIDQ8IZY5 108 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 RGS22Q8NE09 1264 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 REPS2Q8NFH8 660 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 RASGRP4Q8TDF6 673 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 ZMYND12Q9H0C1 365 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 C6orf50Q9HD87 102 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 ADAMTS5Q9UNA0 930 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 TCHHQ07283 1943 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 MYPNQ86TC9 1320 aa11.46□□□□□ -0.57
RPUSD4-205ENST00000530903 ESYT2A0FGR8 921 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 PDHXO00330 501 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 PEX10O60683 326 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 FDX1P10109 184 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 ALAS1P13196 640 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 APLP1P51693 650 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 HERVK_113P62684 666 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 PLS1Q14651 629 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 TMEM132BQ14DG7 1078 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 NFKBIBQ15653 356 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 UBE2SQ16763 222 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 NOM1Q5C9Z4 860 aaKnown RBP11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 CYP4F22Q6NT55 531 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 ANKRD23Q86SG2 305 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 FAM177A1Q8N128 213 aaPredicted RBP11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 DAGLBQ8NCG7 672 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 CUL5Q93034 780 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 PAGR1Q9BTK6 254 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 ZBED2Q9BTP6 218 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 FOXP1Q9H334 677 aaPredicted RBP11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 ZSCAN16Q9H4T2 348 aaPredicted RBP11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 PSTPIP2Q9H939 334 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 HOMER2Q9NSB8 354 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 ABCB11O95342 1321 aa11.45□□□□□ -0.58
RPUSD4-205ENST00000530903 MANSC4A6NHS7 340 aaPredicted RBP11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 CYP2C8P10632 490 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 U2AF2P26368 475 aaKnown RBP eCLIP11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 GNA11P29992 359 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 TRAF1Q13077 416 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 EARS2Q5JPH6 523 aaKnown RBP11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 SNRNP48Q6IEG0 339 aaKnown RBP11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 GALNT17Q6IS24 598 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 THSD4Q6ZMP0 1018 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 NOSTRINQ8IVI9 506 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 CCDC102AQ96A19 550 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 PTPN18Q99952 460 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 RIC8AQ9NPQ8 531 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 TMEM260Q9NX78 707 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 BTBD7Q9P203 1132 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 BIN2Q9UBW5 565 aaPredicted RBP11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 PNMA3Q9UL41 463 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 ZNF214Q9UL59 606 aaPredicted RBP11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 PCDHA6Q9UN73 950 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 PCDHA8Q9Y5H6 950 aa11.44□□□□□ -0.58
RPUSD4-205ENST00000530903 TESPA1A2RU30 521 aaPredicted RBP11.43□□□□□ -0.58
RPUSD4-205ENST00000530903 OPLAHO14841 1288 aa11.43□□□□□ -0.58
RPUSD4-205ENST00000530903 PTPREP23469 700 aa11.43□□□□□ -0.58
RPUSD4-205ENST00000530903 MRPL12P52815 198 aaKnown RBP11.43□□□□□ -0.58
RPUSD4-205ENST00000530903 PTPN5P54829 565 aa11.43□□□□□ -0.58
RPUSD4-205ENST00000530903 DNM1Q05193 864 aaKnown RBP11.43□□□□□ -0.58
RPUSD4-205ENST00000530903 JAKMIP3Q5VZ66 844 aa11.43□□□□□ -0.58
RPUSD4-205ENST00000530903 USP17L6PQ6QN14 398 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms