RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CHP1Q99653 195 aa8.99□□□□□ -0.97
CSDE1-214ENST00000530886 DNAAF2Q9NVR5 837 aaKnown RBP8.99□□□□□ -0.97
CSDE1-214ENST00000530886 BHMG1C9JSJ3 638 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-214ENST00000530886 IGKV5-2P06315 115 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 CD44P16070 742 aaKnown RBP8.98□□□□□ -0.97
CSDE1-214ENST00000530886 NID2Q14112 1375 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 MYBPC3Q14896 1274 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 LRP10Q7Z4F1 713 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 NUP88Q99567 741 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-214ENST00000530886 TRIM4Q9C037 500 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 MMADHCQ9H3L0 296 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-214ENST00000530886 CAPN11Q9UMQ6 739 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 CPDO75976 1380 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 GCOM1H8Y6P7 765 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-214ENST00000530886 MYZAPP0CAP1 466 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 MYBP10242 640 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 GNAZP19086 355 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 GALNTL6Q49A17 601 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 ERMARDQ5T6L9 678 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 C8orf74Q6P047 294 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 WDR59Q6PJI9 974 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 SH3RF1Q7Z6J0 888 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 MYLK4Q86YV6 388 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-214ENST00000530886 MB21D2Q8IYB1 491 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-214ENST00000530886 CHMP6Q96FZ7 201 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 CCDC134Q9H6E4 229 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 PCMTD2Q9NV79 361 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 TMCO1Q9UM00 188 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 HYOU1Q9Y4L1 999 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 NDUFB9Q9Y6M9 179 aa8.98□□□□□ -0.97
CSDE1-214ENST00000530886 ATP6V1C1P21283 382 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 CYLC1P35663 651 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-214ENST00000530886 PIP4K2AP48426 406 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-214ENST00000530886 MXRA7P84157 204 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 ADAM9Q13443 819 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 KRT31Q15323 416 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 CWF19L2Q2TBE0 894 aaKnown RBP8.97□□□□□ -0.97
CSDE1-214ENST00000530886 LMNTD2Q8IXW0 634 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 CNBD1Q8NA66 436 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 ZNF317Q96PQ6 595 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-214ENST00000530886 DMAP1Q9NPF5 467 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-214ENST00000530886 ZNF510Q9Y2H8 683 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 DISP2A7MBM2 1401 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 PPP1R3GB7ZBB8 358 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 CYP27B1O15528 508 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 GSTA2P09210 222 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 CLTAP09496 248 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 HSPD1P10809 573 aaKnown RBP8.97□□□□□ -0.97
CSDE1-214ENST00000530886 RXRBP28702 533 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 TOB1P50616 345 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-214ENST00000530886 COPB1P53618 953 aaKnown RBP8.97□□□□□ -0.97
CSDE1-214ENST00000530886 RASA3Q14644 834 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 TSHZ1Q6ZSZ6 1077 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 LCA5Q86VQ0 697 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 TRIM42Q8IWZ5 723 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 NCSTNQ92542 709 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 LZTS2Q9BRK4 669 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 FAM129AQ9BZQ8 928 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 COPRSQ9NQ92 184 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 ARHGEF3Q9NR81 526 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 HELLSQ9NRZ9 838 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 ATXN10Q9UBB4 475 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 PLAAQ9Y263 795 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 ARAP2Q8WZ64 1704 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 ECEL1O95672 775 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 FAM153BP0C7A2 387 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 ACADSP16219 412 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 PTPREP23469 700 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 ZBED6P86452 979 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 GRIN1Q05586 938 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 KIF5AQ12840 1032 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 PABPC4Q13310 644 aaKnown RBP eCLIP8.97□□□□□ -0.973e-14■■□□□ 13.1
CSDE1-214ENST00000530886 FAM153CQ494X1 144 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 TSPAN18Q96SJ8 248 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 IQCGQ9H095 443 aaKnown RBP8.97□□□□□ -0.97
CSDE1-214ENST00000530886 GOPCQ9HD26 462 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 JADE2Q9NQC1 790 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 FAM153AQ9UHL3 310 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 TSKSQ9UJT2 592 aa8.97□□□□□ -0.97
CSDE1-214ENST00000530886 GRID2IPA4D2P6 1211 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 PRPF3O43395 683 aaKnown RBP8.96□□□□□ -0.97
CSDE1-214ENST00000530886 PTPN12Q05209 780 aaKnown RBP8.96□□□□□ -0.97
CSDE1-214ENST00000530886 DPYDQ12882 1025 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 TAF11Q15544 211 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 NTRK3Q16288 839 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 RABL6Q3YEC7 729 aaPredicted RBP8.96□□□□□ -0.97
CSDE1-214ENST00000530886 SPDYCQ5MJ68 293 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 CC2D2BQ6DHV5 1058 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 KSR2Q6VAB6 950 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 VPS37DQ86XT2 251 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 GBP7Q8N8V2 638 aaPredicted RBP8.96□□□□□ -0.97
CSDE1-214ENST00000530886 KLHDC4Q8TBB5 520 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 MAIP1Q8WWC4 291 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 AZIN2Q96A70 460 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 GSDMAQ96QA5 445 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 FBXO2Q9UK22 296 aaPredicted RBP8.96□□□□□ -0.97
CSDE1-214ENST00000530886 MAP3K2Q9Y2U5 619 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 SLC4A7Q9Y6M7 1214 aa8.96□□□□□ -0.97
CSDE1-214ENST00000530886 SPDYE5A6NIY4 337 aa8.96□□□□□ -0.98
CSDE1-214ENST00000530886 ALDH5A1P51649 535 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms