RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 IL23AQ9NPF7 189 aa26.35■■□□□ 1.81
PACSIN3-207ENST00000530513 TANC1Q9C0D5 1861 aa26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 B4GALT4O60513 344 aa26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 PDHBP11177 359 aa26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 KIAA1211Q6ZU35 1233 aa26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 TBC1D10CQ8IV04 446 aa26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 TCP11L1Q9NUJ3 509 aa26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 CXXC1Q9P0U4 656 aaPredicted RBP26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 Q9Y3F1 56 aa26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 SCN5AQ14524 2016 aa26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 CCDC171Q6TFL3 1326 aa26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 REV3LO60673 3130 aa26.34■■□□□ 1.81
PACSIN3-207ENST00000530513 SCN10AQ9Y5Y9 1956 aa26.33■■□□□ 1.81
PACSIN3-207ENST00000530513 PTPDC1A2A3K4 754 aa26.33■■□□□ 1.81
PACSIN3-207ENST00000530513 ZEB2O60315 1214 aa26.33■■□□□ 1.81
PACSIN3-207ENST00000530513 CLEC4DQ8WXI8 215 aa26.33■■□□□ 1.81
PACSIN3-207ENST00000530513 NOC4LQ9BVI4 516 aaKnown RBP26.33■■□□□ 1.81
PACSIN3-207ENST00000530513 WNT8AQ9H1J5 351 aa26.33■■□□□ 1.81
PACSIN3-207ENST00000530513 ADD3Q9UEY8 706 aaKnown RBP26.33■■□□□ 1.81
PACSIN3-207ENST00000530513 MYH6P13533 1939 aa26.33■■□□□ 1.81
PACSIN3-207ENST00000530513 DUSP28Q4G0W2 176 aa26.32■■□□□ 1.8
PACSIN3-207ENST00000530513 LNPKQ9C0E8 428 aa26.32■■□□□ 1.8
PACSIN3-207ENST00000530513 CALML3P27482 149 aa26.31■■□□□ 1.8
PACSIN3-207ENST00000530513 CCL23P55773 120 aa26.31■■□□□ 1.8
PACSIN3-207ENST00000530513 ZNF543Q08ER8 600 aa26.31■■□□□ 1.8
PACSIN3-207ENST00000530513 HERVK_113Q902F9 699 aa26.31■■□□□ 1.8
PACSIN3-207ENST00000530513 NEDD4P46934 1319 aa26.31■■□□□ 1.8
PACSIN3-207ENST00000530513 MYO9BQ13459 2157 aa26.3■■□□□ 1.8
PACSIN3-207ENST00000530513 TRIM6-TRIM34B2RNG4 842 aa26.3■■□□□ 1.8
PACSIN3-207ENST00000530513 AKNAD1Q5T1N1 836 aa26.3■■□□□ 1.8
PACSIN3-207ENST00000530513 WDR11Q9BZH6 1224 aa26.3■■□□□ 1.8
PACSIN3-207ENST00000530513 SNHG28P0DPA3 235 aa26.29■■□□□ 1.8
PACSIN3-207ENST00000530513 RNF207Q6ZRF8 634 aa26.29■■□□□ 1.8
PACSIN3-207ENST00000530513 TICAM2Q86XR7 235 aa26.29■■□□□ 1.8
PACSIN3-207ENST00000530513 SEZ6LQ9BYH1 1024 aa26.29■■□□□ 1.8
PACSIN3-207ENST00000530513 ALDH8A1Q9H2A2 487 aaPredicted RBP26.29■■□□□ 1.8
PACSIN3-207ENST00000530513 LOC102724159A0A0B4J2E5 919 aa26.28■■□□□ 1.8
PACSIN3-207ENST00000530513 RBM47A0AV96 593 aaKnown RBP26.28■■□□□ 1.8
PACSIN3-207ENST00000530513 PWP2Q15269 919 aaKnown RBP26.28■■□□□ 1.8
PACSIN3-207ENST00000530513 MFSD6Q6ZSS7 791 aa26.28■■□□□ 1.8
PACSIN3-207ENST00000530513 OTOP2Q7RTS6 562 aa26.28■■□□□ 1.8
PACSIN3-207ENST00000530513 RILPL2Q969X0 211 aa26.28■■□□□ 1.8
PACSIN3-207ENST00000530513 PRDM12Q9H4Q4 367 aa26.28■■□□□ 1.8
PACSIN3-207ENST00000530513 WDR19Q8NEZ3 1342 aa26.28■■□□□ 1.8
PACSIN3-207ENST00000530513 TTC28Q96AY4 2481 aa26.27■■□□□ 1.8
PACSIN3-207ENST00000530513 FGBP02675 491 aa26.27■■□□□ 1.8
PACSIN3-207ENST00000530513 RPS6P62753 249 aaKnown RBP26.27■■□□□ 1.8
PACSIN3-207ENST00000530513 PURAQ00577 322 aaKnown RBP26.27■■□□□ 1.8
PACSIN3-207ENST00000530513 OR6J1Q8NGC5 347 aa26.27■■□□□ 1.8
PACSIN3-207ENST00000530513 VWCEQ96DN2 955 aa26.27■■□□□ 1.8
PACSIN3-207ENST00000530513 SCLYQ96I15 445 aa26.27■■□□□ 1.8
PACSIN3-207ENST00000530513 ZKSCAN3Q9BRR0 538 aa26.27■■□□□ 1.8
PACSIN3-207ENST00000530513 TRMT13Q9NUP7 481 aaKnown RBP26.27■■□□□ 1.8
PACSIN3-207ENST00000530513 KIAA1217Q5T5P2 1943 aa26.27■■□□□ 1.8
PACSIN3-207ENST00000530513 GOLGA8HP0CJ92 632 aa26.26■■□□□ 1.79
PACSIN3-207ENST00000530513 PCP11498 1178 aaKnown RBP26.26■■□□□ 1.79
PACSIN3-207ENST00000530513 RAB30Q15771 203 aa26.26■■□□□ 1.79
PACSIN3-207ENST00000530513 TTC14Q96N46 770 aa26.26■■□□□ 1.79
PACSIN3-207ENST00000530513 MTIF3Q9H2K0 278 aaKnown RBP26.26■■□□□ 1.79
PACSIN3-207ENST00000530513 NKX2-4Q9H2Z4 354 aa26.26■■□□□ 1.79
PACSIN3-207ENST00000530513 CPVLQ9H3G5 476 aa26.26■■□□□ 1.79
PACSIN3-207ENST00000530513 POLR3EQ9NVU0 708 aa26.26■■□□□ 1.79
PACSIN3-207ENST00000530513 YBX2Q9Y2T7 364 aaKnown RBP26.26■■□□□ 1.79
PACSIN3-207ENST00000530513 TRANK1O15050 2925 aa26.25■■□□□ 1.79
PACSIN3-207ENST00000530513 TNKSO95271 1327 aa26.25■■□□□ 1.79
PACSIN3-207ENST00000530513 MYL3P08590 195 aa26.25■■□□□ 1.79
PACSIN3-207ENST00000530513 EDNRBP24530 442 aa26.25■■□□□ 1.79
PACSIN3-207ENST00000530513 CPT1AP50416 773 aa26.25■■□□□ 1.79
PACSIN3-207ENST00000530513 PDE4DQ08499 809 aa26.25■■□□□ 1.79
PACSIN3-207ENST00000530513 GAS2L1Q99501 681 aaPredicted RBP26.25■■□□□ 1.79
PACSIN3-207ENST00000530513 PRDM6Q9NQX0 595 aa26.25■■□□□ 1.79
PACSIN3-207ENST00000530513 XIRP2A4UGR9 3374 aa26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 CYP2C9P11712 490 aa26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 SDSP20132 328 aa26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 PPP2R5BQ15173 497 aa26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 USH1GQ495M9 461 aa26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 B4GALNT3Q6L9W6 998 aa26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 PPP1R13LQ8WUF5 828 aa26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 COPS5Q92905 334 aa26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 RNF41Q9H4P4 317 aaPredicted RBP26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 MSRAQ9UJ68 235 aa26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 PNMA2Q9UL42 364 aa26.24■■□□□ 1.79
PACSIN3-207ENST00000530513 ADGRE1Q14246 886 aa26.23■■□□□ 1.79
PACSIN3-207ENST00000530513 SMC5Q8IY18 1101 aa26.23■■□□□ 1.79
PACSIN3-207ENST00000530513 ESR2Q92731 530 aa26.23■■□□□ 1.79
PACSIN3-207ENST00000530513 MTG1Q9BT17 334 aaPredicted RBP26.23■■□□□ 1.79
PACSIN3-207ENST00000530513 RABGGTBP53611 331 aa26.22■■□□□ 1.79
PACSIN3-207ENST00000530513 GPATCH4Q5T3I0 446 aaKnown RBP26.22■■□□□ 1.79
PACSIN3-207ENST00000530513 DNERQ8NFT8 737 aa26.22■■□□□ 1.79
PACSIN3-207ENST00000530513 SCFD2Q8WU76 684 aa26.22■■□□□ 1.79
PACSIN3-207ENST00000530513 PPM1EQ8WY54 764 aa26.22■■□□□ 1.79
PACSIN3-207ENST00000530513 UBA5Q9GZZ9 404 aa26.22■■□□□ 1.79
PACSIN3-207ENST00000530513 PTPRSQ13332 1948 aa26.22■■□□□ 1.79
PACSIN3-207ENST00000530513 MFAP1P55081 439 aaKnown RBP26.21■■□□□ 1.79
PACSIN3-207ENST00000530513 PLEKHM2Q8IWE5 1019 aa26.21■■□□□ 1.79
PACSIN3-207ENST00000530513 RAD50Q92878 1312 aa26.2■■□□□ 1.79
PACSIN3-207ENST00000530513 ZBBXA8MT70 800 aa26.2■■□□□ 1.78
PACSIN3-207ENST00000530513 ZNF213O14771 459 aa26.2■■□□□ 1.78
PACSIN3-207ENST00000530513 NKRFO15226 690 aaKnown RBP eCLIP26.2■■□□□ 1.78
PACSIN3-207ENST00000530513 ARIH2O95376 493 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms