RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	GAS2L1	Q99501	681 aa	Predicted RBP	18.33	■□□□□ 0.52
TM9SF1-209	ENST00000530468	MPHOSPH6	Q99547	160 aa	Known RBP	18.33	■□□□□ 0.52
TM9SF1-209	ENST00000530468	NOC4L	Q9BVI4	516 aa	Known RBP	18.33	■□□□□ 0.52
TM9SF1-209	ENST00000530468	RNF41	Q9H4P4	317 aa	Predicted RBP	18.33	■□□□□ 0.52
TM9SF1-209	ENST00000530468	POLR3E	Q9NVU0	708 aa		18.33	■□□□□ 0.52
TM9SF1-209	ENST00000530468	MSRA	Q9UJ68	235 aa		18.33	■□□□□ 0.52
TM9SF1-209	ENST00000530468	WDR19	Q8NEZ3	1342 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	GRXCR1	A8MXD5	290 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	B4GALT4	O60513	344 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	SNHG28	P0DPA3	235 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	PTGS1	P23219	599 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	PBX2	P40425	430 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	NT5C2	P49902	561 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	CPT1A	P50416	773 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	ZNF543	Q08ER8	600 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	NMI	Q13287	307 aa	Predicted RBP	18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	AKNAD1	Q5T1N1	836 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	TMEM63B	Q5T3F8	832 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	MFSD6	Q6ZSS7	791 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	WDR11	Q9BZH6	1224 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	TRPV6	Q9H1D0	765 aa		18.32	■□□□□ 0.52
TM9SF1-209	ENST00000530468	LCT	P09848	1927 aa		18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	UMODL1	Q5DID0	1318 aa		18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	RBM47	A0AV96	593 aa	Known RBP	18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	TRIM6-TRIM34	B2RNG4	842 aa		18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	NKRF	O15226	690 aa	Known RBP eCLIP	18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	SUPT20HL2	P0C7V6	817 aa		18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	HAND2	P61296	217 aa		18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	PSMC6	P62333	389 aa		18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	AAMP	Q13685	434 aa		18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	RNF207	Q6ZRF8	634 aa		18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	RPUSD2	Q8IZ73	545 aa	Known RBP	18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	DNER	Q8NFT8	737 aa		18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	CLEC4D	Q8WXI8	215 aa		18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.31	■□□□□ 0.52
TM9SF1-209	ENST00000530468	CDH23	Q9H251	3354 aa		18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	RAD50	Q92878	1312 aa		18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468		B4DLN1	442 aa		18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	CALML3	P27482	149 aa		18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	MRPL12	P52815	198 aa	Known RBP	18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	CCL23	P55773	120 aa		18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	PURA	Q00577	322 aa	Known RBP	18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	PDE4D	Q08499	809 aa		18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	BRDT	Q58F21	947 aa	Predicted RBP	18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	GPATCH4	Q5T3I0	446 aa	Known RBP	18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	SLC30A10	Q6XR72	485 aa		18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	ESR2	Q92731	530 aa		18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	RILPL2	Q969X0	211 aa		18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	GPHN	Q9NQX3	736 aa	Predicted RBP	18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	CXXC1	Q9P0U4	656 aa	Predicted RBP	18.3	■□□□□ 0.52
TM9SF1-209	ENST00000530468	PFKM	P08237	780 aa		18.29	■□□□□ 0.52
TM9SF1-209	ENST00000530468	EDNRB	P24530	442 aa		18.29	■□□□□ 0.52
TM9SF1-209	ENST00000530468	RPS6	P62753	249 aa	Known RBP	18.29	■□□□□ 0.52
TM9SF1-209	ENST00000530468	PPP2R5B	Q15173	497 aa		18.29	■□□□□ 0.52
TM9SF1-209	ENST00000530468	TBC1D10C	Q8IV04	446 aa		18.29	■□□□□ 0.52
TM9SF1-209	ENST00000530468	OR6J1	Q8NGC5	347 aa		18.29	■□□□□ 0.52
TM9SF1-209	ENST00000530468	MTG1	Q9BT17	334 aa	Predicted RBP	18.29	■□□□□ 0.52
TM9SF1-209	ENST00000530468	LNPK	Q9C0E8	428 aa		18.29	■□□□□ 0.52
TM9SF1-209	ENST00000530468	MAF1	Q9H063	256 aa		18.29	■□□□□ 0.52
TM9SF1-209	ENST00000530468	WNT8A	Q9H1J5	351 aa		18.29	■□□□□ 0.52
TM9SF1-209	ENST00000530468	EYS	Q5T1H1	3165 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	KPNA6	O60684	536 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	MYL3	P08590	195 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	CCDC178	Q5BJE1	867 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	OTOP2	Q7RTS6	562 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	DGKH	Q86XP1	1220 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	USP38	Q8NB14	1042 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	RGS22	Q8NE09	1264 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	SCFD2	Q8WU76	684 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	PRDM12	Q9H4Q4	367 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	SLC28A3	Q9HAS3	691 aa		18.28	■□□□□ 0.52
TM9SF1-209	ENST00000530468	TNKS	O95271	1327 aa		18.27	■□□□□ 0.52
TM9SF1-209	ENST00000530468	ZNF213	O14771	459 aa		18.27	■□□□□ 0.52
TM9SF1-209	ENST00000530468	SDS	P20132	328 aa		18.27	■□□□□ 0.52
TM9SF1-209	ENST00000530468	TJAP1	Q5JTD0	557 aa		18.27	■□□□□ 0.52
TM9SF1-209	ENST00000530468	IQCA1	Q86XH1	822 aa		18.27	■□□□□ 0.52
TM9SF1-209	ENST00000530468	SMC5	Q8IY18	1101 aa		18.27	■□□□□ 0.52
TM9SF1-209	ENST00000530468	NKX2-4	Q9H2Z4	354 aa		18.27	■□□□□ 0.52
TM9SF1-209	ENST00000530468	SLC4A7	Q9Y6M7	1214 aa		18.27	■□□□□ 0.52
TM9SF1-209	ENST00000530468	NEDD4	P46934	1319 aa		18.26	■□□□□ 0.51
TM9SF1-209	ENST00000530468		A6NJR5	290 aa		18.26	■□□□□ 0.51
TM9SF1-209	ENST00000530468	SCLY	Q96I15	445 aa		18.26	■□□□□ 0.51
TM9SF1-209	ENST00000530468	RWDD1	Q9H446	243 aa	Predicted RBP	18.26	■□□□□ 0.51
TM9SF1-209	ENST00000530468	OSBPL3	Q9H4L5	887 aa		18.26	■□□□□ 0.51
TM9SF1-209	ENST00000530468	TRMT13	Q9NUP7	481 aa	Known RBP	18.26	■□□□□ 0.51
TM9SF1-209	ENST00000530468	CYP2C9	P11712	490 aa		18.25	■□□□□ 0.51
TM9SF1-209	ENST00000530468	PTPN11	Q06124	597 aa	Predicted RBP	18.25	■□□□□ 0.51
TM9SF1-209	ENST00000530468	TTLL4	Q14679	1199 aa		18.25	■□□□□ 0.51
TM9SF1-209	ENST00000530468	USH1G	Q495M9	461 aa		18.25	■□□□□ 0.51
TM9SF1-209	ENST00000530468	NFRKB	Q6P4R8	1299 aa		18.25	■□□□□ 0.51
TM9SF1-209	ENST00000530468	PNMA1	Q8ND90	353 aa		18.25	■□□□□ 0.51
TM9SF1-209	ENST00000530468	YBX2	Q9Y2T7	364 aa	Known RBP	18.25	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ZBBX	A8MT70	800 aa		18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	HIP1	O00291	1037 aa		18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	GOLGA8H	P0CJ92	632 aa		18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	TXN	P10599	105 aa	Known RBP	18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	RFC2	P35250	354 aa		18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	CDC37	Q16543	378 aa	Predicted RBP	18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	NBPF20	Q3BBV1	942 aa		18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	FAM47C	Q5HY64	1035 aa		18.24	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms