RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 HP1BP3Q5SSJ5 553 aaPredicted RBP9.21□□□□□ -0.94
SVIP-204ENST00000530199 LYPD4Q6UWN0 246 aa9.21□□□□□ -0.94
SVIP-204ENST00000530199 PSMD1Q99460 953 aa9.21□□□□□ -0.94
SVIP-204ENST00000530199 ACTR10Q9NZ32 417 aa9.21□□□□□ -0.94
SVIP-204ENST00000530199 TACC3Q9Y6A5 838 aa9.21□□□□□ -0.94
SVIP-204ENST00000530199 SNED1Q8TER0 1413 aa9.21□□□□□ -0.94
SVIP-204ENST00000530199 SPTBN5Q9NRC6 3674 aaKnown RBP9.2□□□□□ -0.94
SVIP-204ENST00000530199 HTR3BO95264 441 aa9.2□□□□□ -0.94
SVIP-204ENST00000530199 DLGAP3O95886 979 aa9.2□□□□□ -0.94
SVIP-204ENST00000530199 DGKGP49619 791 aa9.2□□□□□ -0.94
SVIP-204ENST00000530199 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
SVIP-204ENST00000530199 FOXD4L6Q3SYB3 417 aaPredicted RBP9.2□□□□□ -0.94
SVIP-204ENST00000530199 FOXD4L3Q6VB84 417 aaPredicted RBP9.2□□□□□ -0.94
SVIP-204ENST00000530199 CYFIP1Q7L576 1253 aa9.2□□□□□ -0.94
SVIP-204ENST00000530199 DTWD1Q8N5C7 304 aa9.2□□□□□ -0.94
SVIP-204ENST00000530199 CELF2-AS1Q8N7Q2 184 aa9.2□□□□□ -0.94
SVIP-204ENST00000530199 ELMO3Q96BJ8 720 aa9.2□□□□□ -0.94
SVIP-204ENST00000530199 PUS7Q96PZ0 661 aaKnown RBP9.2□□□□□ -0.94
SVIP-204ENST00000530199 SRPK1Q96SB4 655 aaKnown RBP9.2□□□□□ -0.94
SVIP-204ENST00000530199 KCNK4Q9NYG8 393 aa9.2□□□□□ -0.94
SVIP-204ENST00000530199 GPRC5DQ9NZD1 345 aa9.2□□□□□ -0.94
SVIP-204ENST00000530199 CORINQ9Y5Q5 1042 aa9.2□□□□□ -0.94
SVIP-204ENST00000530199 H0YGN5 161 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 CYP19A1P11511 503 aaPredicted RBP9.19□□□□□ -0.94
SVIP-204ENST00000530199 CASP7P55210 303 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 RASA3Q14644 834 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 ZC3H12AQ5D1E8 599 aaKnown RBP9.19□□□□□ -0.94
SVIP-204ENST00000530199 SDE2Q6IQ49 451 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 LRP10Q7Z4F1 713 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 TNKS2Q9H2K2 1166 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 PRO3102Q9H379 93 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 ANTXR1Q9H6X2 564 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 SNTG2Q9NY99 539 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 COL4A5P29400 1685 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 PAPPA2Q9BXP8 1791 aa9.19□□□□□ -0.94
SVIP-204ENST00000530199 KLRG2A4D1S0 409 aaPredicted RBP9.18□□□□□ -0.94
SVIP-204ENST00000530199 MEIS3P2A8K0S8 358 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 DCDC2CA8MYV0 355 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 HOXB4P17483 251 aaPredicted RBP9.18□□□□□ -0.94
SVIP-204ENST00000530199 KIAA0100Q14667 2235 aaKnown RBP9.18□□□□□ -0.94
SVIP-204ENST00000530199 TBC1D9BQ66K14 1250 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 RUFY4Q6ZNE9 571 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 JAZF1Q86VZ6 243 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 DNAJC10Q8IXB1 793 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 DEPDC7Q96QD5 511 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 WDR18Q9BV38 432 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 REV1Q9UBZ9 1251 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 MSRB2Q9Y3D2 182 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 PCDHGC5Q9Y5F6 944 aa9.18□□□□□ -0.94
SVIP-204ENST00000530199 SYNGAP1Q96PV0 1343 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 CDHR2Q9BYE9 1310 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 FAM221BA6H8Z2 402 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 SLFN14P0C7P3 912 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 NPR1P16066 1061 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 GMPRP36959 345 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 DDR2Q16832 855 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 LCE2CQ5TA81 110 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 C12orf40Q86WS4 652 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 C19orf47Q8N9M1 422 aaKnown RBP9.17□□□□□ -0.94
SVIP-204ENST00000530199 WHAMMQ8TF30 809 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 TMEM40Q8WWA1 233 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 TM9SF2Q99805 663 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 GBA2Q9HCG7 927 aaPredicted RBP9.17□□□□□ -0.94
SVIP-204ENST00000530199 ZBTB1Q9Y2K1 713 aa9.17□□□□□ -0.94
SVIP-204ENST00000530199 PLCG1P19174 1290 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 EN2P19622 333 aaPredicted RBP9.16□□□□□ -0.94
SVIP-204ENST00000530199 ST5P78524 1137 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 RING1Q06587 406 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 PDE4BQ07343 736 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 PPP2R5EQ16537 467 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 FXNQ16595 210 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 EXOSC6Q5RKV6 272 aaKnown RBP9.16□□□□□ -0.94
SVIP-204ENST00000530199 FBXO11Q86XK2 927 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 C2orf69Q8N8R5 385 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 CNBD1Q8NA66 436 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 CCDC113Q9H0I3 377 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 ST7Q9NRC1 585 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 GMIPQ9P107 970 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 CSADQ9Y600 493 aa9.16□□□□□ -0.94
SVIP-204ENST00000530199 MRPL42Q9Y6G3 142 aaKnown RBP9.16□□□□□ -0.94
SVIP-204ENST00000530199 A0A087WZG4 1122 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 A0A1W2PPC1 479 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 PRAMEF27A3QJZ7 478 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 FYB1O15117 783 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 GUCY2CP25092 1073 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 EIF5P55010 431 aaKnown RBP9.15□□□□□ -0.94
SVIP-204ENST00000530199 TMEM201Q5SNT2 666 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 LARP1BQ659C4 914 aaKnown RBP9.15□□□□□ -0.94
SVIP-204ENST00000530199 OLFM4Q6UX06 510 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 UBASH3BQ8TF42 649 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 RAD18Q9NS91 495 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 STXBP5LQ9Y2K9 1186 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 HIF3AQ9Y2N7 669 aa9.15□□□□□ -0.94
SVIP-204ENST00000530199 SCN7AQ01118 1682 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 WASHC2AQ641Q2 1341 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 A0A1W2PQH9 124 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 SLC22A31A6NKX4 558 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 DNAJA2O60884 412 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 TBC1D8O95759 1140 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 GRK4P32298 578 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms