RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PPP1R11O60927 126 aaPredicted RBP16.45■□□□□ 0.22
TTC39A-216ENST00000530004 CNMDO75829 334 aa16.45■□□□□ 0.22
TTC39A-216ENST00000530004 ATP2B1P20020 1258 aa16.45■□□□□ 0.22
TTC39A-216ENST00000530004 OAZ1P54368 228 aa16.45■□□□□ 0.22
TTC39A-216ENST00000530004 PIK3AP1Q6ZUJ8 805 aa16.45■□□□□ 0.22
TTC39A-216ENST00000530004 CCAR1Q8IX12 1150 aaKnown RBP16.45■□□□□ 0.22
TTC39A-216ENST00000530004 CPXCR1Q8N123 301 aa16.45■□□□□ 0.22
TTC39A-216ENST00000530004 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
TTC39A-216ENST00000530004 ZMYND12Q9H0C1 365 aa16.45■□□□□ 0.22
TTC39A-216ENST00000530004 RAVER2Q9HCJ3 691 aaKnown RBP16.45■□□□□ 0.22
TTC39A-216ENST00000530004 PCDHB6Q9Y5E3 794 aa16.45■□□□□ 0.22
TTC39A-216ENST00000530004 PARP14Q460N5 1801 aa16.45■□□□□ 0.22
TTC39A-216ENST00000530004 SMCO2A6NFE2 343 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 M0R2N6 131 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 TLR2O60603 784 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 PEX10O60683 326 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 PPP6R2O75170 966 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 ICAM1P05362 532 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 MARCKSP29966 332 aaPredicted RBP16.44■□□□□ 0.22
TTC39A-216ENST00000530004 CRHR2Q13324 411 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 ADALQ6DHV7 355 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 FBXO11Q86XK2 927 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 JMYQ8N9B5 988 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 RASGRP4Q8TDF6 673 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 COA7Q96BR5 231 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 AMNQ9BXJ7 453 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 C6orf50Q9HD87 102 aa16.44■□□□□ 0.22
TTC39A-216ENST00000530004 GNA11P29992 359 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 STAT3P40763 770 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 ZNF445P59923 1031 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 ANKRD13CQ8N6S4 541 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 AGBL1Q96MI9 1066 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 TEX13BQ9BXU2 312 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 RNF186Q9NXI6 227 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 DACT1Q9NYF0 836 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 PCDHA6Q9UN73 950 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 CEP131Q9UPN4 1083 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 PCDHA8Q9Y5H6 950 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 A0A1W2PQ27 194 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 A0A1W2PQ64 194 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 A0A1W2PQD8 194 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 ESYT2A0FGR8 921 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 SYCE3A1L190 88 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 Q3C1V9 767 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 PPP1R18Q6NYC8 613 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 FSIP1Q8NA03 581 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 CFHR5Q9BXR6 569 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 SPATC1LQ9H0A9 340 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 GOLPH3LQ9H4A5 285 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.43■□□□□ 0.22
TTC39A-216ENST00000530004 MORF4L1Q9UBU8 362 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 CPA4Q9UI42 421 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 PNMA2Q9UL42 364 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 CCPG1Q9ULG6 757 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 A0A0G2JMZ2 1700 aa16.43■□□□□ 0.22
TTC39A-216ENST00000530004 CCDC194A0A1B0GVG4 234 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 NR1I2O75469 434 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 BCRP11274 1271 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 TAL1P17542 331 aaPredicted RBP16.42■□□□□ 0.22
TTC39A-216ENST00000530004 TRAPPC10P48553 1259 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 ERVK-9P63128 1117 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 ERVK-24P63145 666 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 PLS1Q14651 629 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 FAM110CQ1W6H9 321 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 USH1GQ495M9 461 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 TTC38Q5R3I4 469 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 AXDND1Q5T1B0 1012 aaPredicted RBP16.42■□□□□ 0.22
TTC39A-216ENST00000530004 SNRNP48Q6IEG0 339 aaKnown RBP16.42■□□□□ 0.22
TTC39A-216ENST00000530004 C17orf99Q6UX52 265 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 GPRC5AQ8NFJ5 357 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 MRPS27Q92552 414 aaKnown RBP16.42■□□□□ 0.22
TTC39A-216ENST00000530004 PCDHA1Q9Y5I3 950 aa16.42■□□□□ 0.22
TTC39A-216ENST00000530004 WNT7AO00755 349 aa16.41■□□□□ 0.22
TTC39A-216ENST00000530004 TRPA1O75762 1119 aa16.41■□□□□ 0.22
TTC39A-216ENST00000530004 MAP2K1Q02750 393 aaPredicted RBP16.41■□□□□ 0.22
TTC39A-216ENST00000530004 TRAF1Q13077 416 aa16.41■□□□□ 0.22
TTC39A-216ENST00000530004 RIOX2Q8IUF8 465 aa16.41■□□□□ 0.22
TTC39A-216ENST00000530004 MOV10L1Q9BXT6 1211 aaKnown RBP16.41■□□□□ 0.22
TTC39A-216ENST00000530004 R3HDMLQ9H3Y0 253 aa16.41■□□□□ 0.22
TTC39A-216ENST00000530004 DDX19AQ9NUU7 478 aaKnown RBP16.41■□□□□ 0.22
TTC39A-216ENST00000530004 RIPK3Q9Y572 518 aa16.41■□□□□ 0.22
TTC39A-216ENST00000530004 TBC1D8O95759 1140 aa16.41■□□□□ 0.22
TTC39A-216ENST00000530004 ADCY7P51828 1080 aa16.41■□□□□ 0.22
TTC39A-216ENST00000530004 NUP62CLQ9H1M0 184 aa16.41■□□□□ 0.22
TTC39A-216ENST00000530004 GOLGA6L3A6NEY3 463 aa16.4■□□□□ 0.22
TTC39A-216ENST00000530004 LETM1O95202 739 aaPredicted RBP16.4■□□□□ 0.22
TTC39A-216ENST00000530004 ALAS1P13196 640 aa16.4■□□□□ 0.22
TTC39A-216ENST00000530004 DEKP35659 375 aaKnown RBP16.4■□□□□ 0.22
TTC39A-216ENST00000530004 ZNF174Q15697 407 aa16.4■□□□□ 0.22
TTC39A-216ENST00000530004 GAS2L3Q86XJ1 694 aa16.4■□□□□ 0.22
TTC39A-216ENST00000530004 REXO1Q8N1G1 1221 aaKnown RBP16.4■□□□□ 0.22
TTC39A-216ENST00000530004 KRI1Q8N9T8 703 aaKnown RBP16.4■□□□□ 0.22
TTC39A-216ENST00000530004 ABCB11O95342 1321 aa16.4■□□□□ 0.22
TTC39A-216ENST00000530004 A0A1B0GVL5 298 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 FSD2A1L4K1 749 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 CUTAO60888 179 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 SLC25A27O95847 323 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 BMP15O95972 392 aa16.39■□□□□ 0.21
TTC39A-216ENST00000530004 CMA1P23946 247 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms