RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PCDHA1Q9Y5I3 950 aa14.7□□□□□ -0.06
CCDC90B-216ENST00000529856 MCM3APO60318 1980 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 LCTP09848 1927 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 SEC24BO95487 1268 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 CALML3P27482 149 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 RCAN1P53805 252 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 APOBRQ0VD83 1088 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 ACVR2BQ13705 512 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 TMTC3Q6ZXV5 915 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 CMTR1Q8N1G2 835 aaKnown RBP14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 PIBF1Q8WXW3 757 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 BRF1Q92994 677 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 RRP36Q96EU6 259 aaKnown RBP14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 ABHD16BQ9H3Z7 469 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 RBM28Q9NW13 759 aaKnown RBP14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 ADD3Q9UEY8 706 aaKnown RBP14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 CYP46A1Q9Y6A2 500 aa14.69□□□□□ -0.06
CCDC90B-216ENST00000529856 LOC102724159A0A0B4J2E5 919 aa14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 OPLAHO14841 1288 aa14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 FARP2O94887 1054 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 MNX1P50219 401 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 ALDH5A1P51649 535 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 ANAPC15P60006 121 aa14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 PWP2Q15269 919 aaKnown RBP14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 RTN1Q16799 776 aa14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 MORC4Q8TE76 937 aa14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 KATNBL1Q9H079 304 aa14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 FAM217BQ9NTX9 383 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-216ENST00000529856 TNRC18O15417 2968 aaPredicted RBP14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 MKI67P46013 3256 aaKnown RBP14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 AKR1A1P14550 325 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 EVCP57679 992 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 GHRHRQ02643 423 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 PPP2R5BQ15173 497 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 C8orf34Q49A92 452 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 ANO1Q5XXA6 986 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 CCDC82Q8N4S0 544 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 SAMD3Q8N6K7 520 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 DNERQ8NFT8 737 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 SYTL5Q8TDW5 730 aaPredicted RBP14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 IL17RAQ96F46 866 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 MAP3K20Q9NYL2 800 aaKnown RBP14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 ZHX1Q9UKY1 873 aaPredicted RBP14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 FAM184BQ9ULE4 1060 aa14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 DDX49Q9Y6V7 483 aaKnown RBP14.67□□□□□ -0.06
CCDC90B-216ENST00000529856 FRMPD3Q5JV73 1810 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 GOLGA8AA7E2F4 631 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 GOLGA8BA8MQT2 603 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 CFBP00751 764 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 CDC27P30260 824 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 HSD17B4P51659 736 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 FUT2Q10981 343 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 TOB2Q14106 344 aaPredicted RBP14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 CCDC144BQ3MJ40 725 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 NECAB2Q7Z6G3 386 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 ARRDC4Q8NCT1 418 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 DIS3LQ8TF46 1054 aaKnown RBP14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 PAWRQ96IZ0 340 aaKnown RBP14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 TAAR1Q96RJ0 339 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 UPF3BQ9BZI7 483 aaKnown RBP14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 COL20A1Q9P218 1284 aa14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 SEC63Q9UGP8 760 aaKnown RBP14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 NAP1L2Q9ULW6 460 aaPredicted RBP14.66□□□□□ -0.06
CCDC90B-216ENST00000529856 CCDC196A0A1B0GTZ2 297 aa14.65□□□□□ -0.06
CCDC90B-216ENST00000529856 B4DLN1 442 aa14.65□□□□□ -0.06
CCDC90B-216ENST00000529856 RARBP10826 455 aa14.65□□□□□ -0.06
CCDC90B-216ENST00000529856 EDNRBP24530 442 aa14.65□□□□□ -0.06
CCDC90B-216ENST00000529856 ADD1P35611 737 aaKnown RBP14.65□□□□□ -0.06
CCDC90B-216ENST00000529856 METAP2P50579 478 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC90B-216ENST00000529856 MRPL12P52815 198 aaKnown RBP14.65□□□□□ -0.06
CCDC90B-216ENST00000529856 MPHOSPH6Q99547 160 aaKnown RBP14.65□□□□□ -0.06
CCDC90B-216ENST00000529856 PDRG1Q9NUG6 133 aa14.65□□□□□ -0.06
CCDC90B-216ENST00000529856 CNTNAP5Q8WYK1 1306 aa14.65□□□□□ -0.06
CCDC90B-216ENST00000529856 NID2Q14112 1375 aa14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 hCG_1642624A0A1W2PR95 340 aa14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 GCOM1H8Y6P7 765 aaPredicted RBP14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 DUSP11O75319 330 aaKnown RBP14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 POLR2MP0CAP2 368 aa14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 PDIA3P30101 505 aaKnown RBP14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 IQSEC1Q6DN90 963 aa14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 TAPT1Q6NXT6 567 aa14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 EEPD1Q7L9B9 569 aa14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 NSUN6Q8TEA1 469 aaKnown RBP14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 RMDN3Q96TC7 470 aa14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 C11orf49Q9H6J7 331 aa14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 VTA1Q9NP79 307 aa14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 XPNPEP3Q9NQH7 507 aa14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 V9GY48 417 aaPredicted RBP14.64□□□□□ -0.07
CCDC90B-216ENST00000529856 DNM1LO00429 736 aa14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 ADCY6O43306 1168 aa14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 COL6A1P12109 1028 aa14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 HOXA13P31271 388 aaPredicted RBP14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 PDE4DQ08499 809 aa14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 LRRC41Q15345 812 aa14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 GJC2Q5T442 439 aaPredicted RBP14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 FBXO16Q8IX29 292 aaPredicted RBP14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 ZNF274Q96GC6 653 aaPredicted RBP14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 IWS1Q96ST2 819 aa14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 ALDH8A1Q9H2A2 487 aaPredicted RBP14.63□□□□□ -0.07
CCDC90B-216ENST00000529856 PDGFCQ9NRA1 345 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms