RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 NUP133Q8WUM0 1156 aa15.24■□□□□ 0.03
SSH3-206ENST00000529224 PURBQ96QR8 312 aaKnown RBP15.24■□□□□ 0.03
SSH3-206ENST00000529224 MPHOSPH6Q99547 160 aaKnown RBP15.24■□□□□ 0.03
SSH3-206ENST00000529224 LBHD1Q9BQE6 289 aaPredicted RBP15.24■□□□□ 0.03
SSH3-206ENST00000529224 JMJD4Q9H9V9 463 aa15.24■□□□□ 0.03
SSH3-206ENST00000529224 VAT1LQ9HCJ6 419 aa15.24■□□□□ 0.03
SSH3-206ENST00000529224 PRKAG2Q9UGJ0 569 aa15.24■□□□□ 0.03
SSH3-206ENST00000529224 MAD2L2Q9UI95 211 aa15.24■□□□□ 0.03
SSH3-206ENST00000529224 A0A1W2PQ45 241 aaPredicted RBP15.23■□□□□ 0.03
SSH3-206ENST00000529224 A0A1W2PQY0 241 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 PALM3A6NDB9 673 aaPredicted RBP15.23■□□□□ 0.03
SSH3-206ENST00000529224 B4DLN1 442 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 ADCY6O43306 1168 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 MRPL12P52815 198 aaKnown RBP15.23■□□□□ 0.03
SSH3-206ENST00000529224 ACLYP53396 1101 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 GRM4Q14833 912 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 CHST3Q7LGC8 479 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 SH3RF1Q7Z6J0 888 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 CATIPQ7Z7H3 387 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 FBXO16Q8IX29 292 aaPredicted RBP15.23■□□□□ 0.03
SSH3-206ENST00000529224 DNERQ8NFT8 737 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 MTA3Q9BTC8 594 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 PRDM5Q9NQX1 630 aaPredicted RBP15.23■□□□□ 0.03
SSH3-206ENST00000529224 PDLIM7Q9NR12 457 aa15.23■□□□□ 0.03
SSH3-206ENST00000529224 MRPL11Q9Y3B7 192 aaKnown RBP15.23■□□□□ 0.03
SSH3-206ENST00000529224 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.22■□□□□ 0.03
SSH3-206ENST00000529224 TRIM43BA6NCK2 446 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 MYADML2A6NDP7 307 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 SLC27A2O14975 620 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 CDC45O75419 566 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 MCM5P33992 734 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 ANTXR2P58335 489 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 NKX3-2P78367 333 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 IRX5P78411 483 aaPredicted RBP15.22■□□□□ 0.03
SSH3-206ENST00000529224 TLE2Q04725 743 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 NECTIN1Q15223 517 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 GNASQ5JWF2 1037 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 CREB3L3Q68CJ9 461 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 CCSAPQ6IQ19 270 aaPredicted RBP15.22■□□□□ 0.03
SSH3-206ENST00000529224 TAPT1Q6NXT6 567 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 EEPD1Q7L9B9 569 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 TLK2Q86UE8 772 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 MCF2L2Q86YR7 1114 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 TRIM43Q96BQ3 446 aaPredicted RBP15.22■□□□□ 0.03
SSH3-206ENST00000529224 MTMR8Q96EF0 704 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 AMNQ9BXJ7 453 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 AP5M1Q9H0R1 490 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 SENP2Q9HC62 589 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 STARD7Q9NQZ5 370 aa15.22■□□□□ 0.03
SSH3-206ENST00000529224 GNEQ9Y223 722 aaKnown RBP15.22■□□□□ 0.03
SSH3-206ENST00000529224 DDX49Q9Y6V7 483 aaKnown RBP15.22■□□□□ 0.03
SSH3-206ENST00000529224 PDE4DQ08499 809 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 TROAPQ12815 778 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 TRAF1Q13077 416 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 RNF20Q5VTR2 975 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 TMTC2Q8N394 836 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 BADQ92934 168 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 TMEM87BQ96K49 555 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 GLT1D1Q96MS3 346 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 PDGFCQ9NRA1 345 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 MTMR10Q9NXD2 777 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 Q9Y3F1 56 aa15.21■□□□□ 0.03
SSH3-206ENST00000529224 ELP1O95163 1332 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 ZBTB5O15062 677 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 PRC1O43663 620 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 ZEB2O60315 1214 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 ASGR1P07306 291 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 SMPD1P17405 629 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 EDNRBP24530 442 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 ITGB8P26012 769 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 C9orf50Q5SZB4 431 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 MAP3K14Q99558 947 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 SCN10AQ9Y5Y9 1956 aa15.2■□□□□ 0.02
SSH3-206ENST00000529224 RBM47A0AV96 593 aaKnown RBP15.19■□□□□ 0.02
SSH3-206ENST00000529224 CTAGE5O15320 804 aa15.19■□□□□ 0.02
SSH3-206ENST00000529224 DYNC1LI2O43237 492 aaPredicted RBP15.19■□□□□ 0.02
SSH3-206ENST00000529224 DDAH1O94760 285 aa15.19■□□□□ 0.02
SSH3-206ENST00000529224 CENPBP07199 599 aaPredicted RBP15.19■□□□□ 0.02
SSH3-206ENST00000529224 KIF5BP33176 963 aa15.19■□□□□ 0.02
SSH3-206ENST00000529224 SHHQ15465 462 aa15.19■□□□□ 0.02
SSH3-206ENST00000529224 FSCN1Q16658 493 aaKnown RBP15.19■□□□□ 0.02
SSH3-206ENST00000529224 DUSP28Q4G0W2 176 aa15.19■□□□□ 0.02
SSH3-206ENST00000529224 ZNF654Q8IZM8 581 aa15.19■□□□□ 0.02
SSH3-206ENST00000529224 SAMD3Q8N6K7 520 aa15.19■□□□□ 0.02
SSH3-206ENST00000529224 SYTL5Q8TDW5 730 aaPredicted RBP15.19■□□□□ 0.02
SSH3-206ENST00000529224 VTI1AQ96AJ9 217 aa15.19■□□□□ 0.02
SSH3-206ENST00000529224 WDR11Q9BZH6 1224 aa15.19■□□□□ 0.02
SSH3-206ENST00000529224 MROH7Q68CQ1 1323 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 A0A0U1RQG5 324 aaPredicted RBP15.18■□□□□ 0.02
SSH3-206ENST00000529224 DCDC2CA8MYV0 355 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 SH2B2O14492 632 aaPredicted RBP15.18■□□□□ 0.02
SSH3-206ENST00000529224 PQBP1O60828 265 aaKnown RBP15.18■□□□□ 0.02
SSH3-206ENST00000529224 CLTBP09497 229 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 LIFRP42702 1097 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 BEX3Q00994 111 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 NFXL1Q6ZNB6 911 aa15.18■□□□□ 0.02
SSH3-206ENST00000529224 ANKRD33Q7Z3H0 272 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms