RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TNFRSF10DQ9UBN6 386 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 PPP1R1BQ9UD71 204 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-212ENST00000529046 TTBK1Q5TCY1 1321 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-212ENST00000529046 PHLDB1Q86UU1 1377 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 EEA1Q15075 1411 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 CTTNBP2Q8WZ74 1663 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 DDAH1O94760 285 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 VAV1P15498 845 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 SLC10A6Q3KNW5 377 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 NOL9Q5SY16 702 aaKnown RBP7.16□□□□□ -1.26
CSDE1-212ENST00000529046 CWF19L1Q69YN2 538 aaKnown RBP7.16□□□□□ -1.26
CSDE1-212ENST00000529046 HEATR6Q6AI08 1181 aaKnown RBP7.16□□□□□ -1.26
CSDE1-212ENST00000529046 DPH6Q7L8W6 267 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 ZNF605Q86T29 641 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 SIRT2Q8IXJ6 389 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 JMYQ8N9B5 988 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 ST7Q9NRC1 585 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 ERVK13-1Q9NX77 482 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 APEX2Q9UBZ4 518 aa7.16□□□□□ -1.26
CSDE1-212ENST00000529046 DIS3Q9Y2L1 958 aaKnown RBP7.16□□□□□ -1.26
CSDE1-212ENST00000529046 GPR55Q9Y2T6 319 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-212ENST00000529046 TSPOAP1O95153 1857 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 U2SURPO15042 1029 aaKnown RBP7.15□□□□□ -1.26
CSDE1-212ENST00000529046 KRT1P04264 644 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 C1QTNF9P0C862 333 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 NAT2P11245 290 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 RTP1P59025 263 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 TCEAL1Q15170 157 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 CCDC144BQ3MJ40 725 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 ANKLE2Q86XL3 938 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 TOX2Q96NM4 488 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 GBP3Q9H0R5 595 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 AP5S1Q9NUS5 200 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 SNTG2Q9NY99 539 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
CSDE1-212ENST00000529046 CD109Q6YHK3 1445 aa7.15□□□□□ -1.27
CSDE1-212ENST00000529046 FAM221BA6H8Z2 402 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 TCAF2A6NFQ2 919 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 FADS2P1A8MWK0 482 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 H0Y8X5 98 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 PDPK1O15530 556 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 EFEMP2O95967 443 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 MED14OSP0DP75 135 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 ITGA4P13612 1032 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 GLDCP23378 1020 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 GRB10Q13322 594 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 ADGRF1Q5T601 910 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 KCNN1Q92952 543 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 BRF1Q92994 677 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 MRGPRX3Q96LB0 322 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 DEPDC7Q96QD5 511 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 CRTAC1Q9NQ79 661 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 EMC9Q9Y3B6 208 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 TAF6LQ9Y6J9 622 aa7.14□□□□□ -1.27
CSDE1-212ENST00000529046 CFAP43Q8NDM7 1665 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 ARAP3Q8WWN8 1544 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 ATP10BO94823 1461 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 OR14I1A6ND48 311 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 ETV2O00321 342 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-212ENST00000529046 PEX10O60683 326 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 NFE2L2Q16236 605 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 HSF5Q4G112 596 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-212ENST00000529046 RTP2Q5QGT7 225 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 GALNT18Q6P9A2 607 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 ATG14Q6ZNE5 492 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 FIBCD1Q8N539 461 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 NAT16Q8N8M0 369 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 PMFBP1Q8TBY8 1022 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 SGSM3Q96HU1 749 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 APBA2Q99767 749 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 PLCD4Q9BRC7 762 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 MCOLN1Q9GZU1 580 aa7.13□□□□□ -1.27
CSDE1-212ENST00000529046 ZNF552Q9H707 407 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-212ENST00000529046 CGGBP1Q9UFW8 167 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-212ENST00000529046 CDK11AQ9UQ88 783 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-212ENST00000529046 WTIPA6NIX2 430 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-212ENST00000529046 PPM1BO75688 479 aa7.12□□□□□ -1.27
CSDE1-212ENST00000529046 GSTM1P09488 218 aa7.12□□□□□ -1.27
CSDE1-212ENST00000529046 CILP2Q8IUL8 1156 aa7.12□□□□□ -1.27
CSDE1-212ENST00000529046 ZSCAN18Q8TBC5 510 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-212ENST00000529046 FGD4Q96M96 766 aa7.12□□□□□ -1.27
CSDE1-212ENST00000529046 SLC12A9Q9BXP2 914 aa7.12□□□□□ -1.27
CSDE1-212ENST00000529046 PIF1Q9H611 641 aa7.12□□□□□ -1.27
CSDE1-212ENST00000529046 CD320Q9NPF0 282 aa7.12□□□□□ -1.27
CSDE1-212ENST00000529046 SF3B6Q9Y3B4 125 aaKnown RBP7.12□□□□□ -1.27
CSDE1-212ENST00000529046 MYOCOSA0A1B0GUC4 107 aa7.11□□□□□ -1.27
CSDE1-212ENST00000529046 A0A1W2PQ45 241 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-212ENST00000529046 A0A1W2PQY0 241 aa7.11□□□□□ -1.27
CSDE1-212ENST00000529046 NPIPB6E9PJ23 425 aa7.11□□□□□ -1.27
CSDE1-212ENST00000529046 SEMA7AO75326 666 aa7.11□□□□□ -1.27
CSDE1-212ENST00000529046 PNLIPP16233 465 aa7.11□□□□□ -1.27
CSDE1-212ENST00000529046 NOP2P46087 812 aaKnown RBP7.11□□□□□ -1.27
CSDE1-212ENST00000529046 TMEM132EQ6IEE7 984 aa7.11□□□□□ -1.27
CSDE1-212ENST00000529046 SLCO6A1Q86UG4 719 aa7.11□□□□□ -1.27
CSDE1-212ENST00000529046 LRRC56Q8IYG6 542 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-212ENST00000529046 BVESQ8NE79 360 aa7.11□□□□□ -1.27
CSDE1-212ENST00000529046 NOL6Q9H6R4 1146 aaKnown RBP7.11□□□□□ -1.27
CSDE1-212ENST00000529046 SAMD9Q5K651 1589 aa7.11□□□□□ -1.27
CSDE1-212ENST00000529046 ADGRL1O94910 1474 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms