RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 MRPL12P52815 198 aaKnown RBP18.36■□□□□ 0.53
CTSB-215ENST00000528965 DUSP28Q4G0W2 176 aa18.36■□□□□ 0.53
CTSB-215ENST00000528965 CCDC178Q5BJE1 867 aa18.36■□□□□ 0.53
CTSB-215ENST00000528965 GPATCH4Q5T3I0 446 aaKnown RBP18.36■□□□□ 0.53
CTSB-215ENST00000528965 RNF207Q6ZRF8 634 aa18.36■□□□□ 0.53
CTSB-215ENST00000528965 IL23AQ9NPF7 189 aa18.36■□□□□ 0.53
CTSB-215ENST00000528965 POLR3EQ9NVU0 708 aa18.36■□□□□ 0.53
CTSB-215ENST00000528965 CALML3P27482 149 aa18.35■□□□□ 0.53
CTSB-215ENST00000528965 PDE4DQ08499 809 aa18.35■□□□□ 0.53
CTSB-215ENST00000528965 ZNF543Q08ER8 600 aa18.35■□□□□ 0.53
CTSB-215ENST00000528965 RAB30Q15771 203 aa18.35■□□□□ 0.53
CTSB-215ENST00000528965 COL25A1Q9BXS0 654 aaPredicted RBP18.35■□□□□ 0.53
CTSB-215ENST00000528965 WDR11Q9BZH6 1224 aa18.35■□□□□ 0.53
CTSB-215ENST00000528965 ZNF576Q9H609 170 aa18.35■□□□□ 0.53
CTSB-215ENST00000528965 DIAPH3Q9NSV4 1193 aa18.35■□□□□ 0.53
CTSB-215ENST00000528965 HIP1O00291 1037 aa18.34■□□□□ 0.53
CTSB-215ENST00000528965 NKRFO15226 690 aaKnown RBP eCLIP18.34■□□□□ 0.532e-7■■□□□ 14
CTSB-215ENST00000528965 SNHG28P0DPA3 235 aa18.34■□□□□ 0.53
CTSB-215ENST00000528965 CYP2C18P33260 490 aa18.34■□□□□ 0.53
CTSB-215ENST00000528965 PPP2R5BQ15173 497 aa18.34■□□□□ 0.53
CTSB-215ENST00000528965 RASIP1Q5U651 963 aa18.34■□□□□ 0.53
CTSB-215ENST00000528965 SLC30A10Q6XR72 485 aa18.34■□□□□ 0.53
CTSB-215ENST00000528965 ZNF365Q70YC5 407 aa18.34■□□□□ 0.53
CTSB-215ENST00000528965 IQCA1Q86XH1 822 aa18.34■□□□□ 0.53
CTSB-215ENST00000528965 TBC1D10CQ8IV04 446 aa18.34■□□□□ 0.53
CTSB-215ENST00000528965 DNERQ8NFT8 737 aa18.34■□□□□ 0.53
CTSB-215ENST00000528965 GPHNQ9NQX3 736 aaPredicted RBP18.34■□□□□ 0.53
CTSB-215ENST00000528965 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
CTSB-215ENST00000528965 LCTP09848 1927 aa18.33■□□□□ 0.53
CTSB-215ENST00000528965 ZNF213O14771 459 aa18.33■□□□□ 0.52
CTSB-215ENST00000528965 SUPT20HL2P0C7V6 817 aa18.33■□□□□ 0.52
CTSB-215ENST00000528965 ACRP10323 421 aa18.33■□□□□ 0.52
CTSB-215ENST00000528965 SDSP20132 328 aa18.33■□□□□ 0.52
CTSB-215ENST00000528965 C16orf59Q7L2K0 433 aa18.33■□□□□ 0.52
CTSB-215ENST00000528965 DGKHQ86XP1 1220 aa18.33■□□□□ 0.52
CTSB-215ENST00000528965 SMC5Q8IY18 1101 aa18.33■□□□□ 0.52
CTSB-215ENST00000528965 SCFD2Q8WU76 684 aa18.33■□□□□ 0.52
CTSB-215ENST00000528965 HERVK_113Q902F9 699 aa18.33■□□□□ 0.52
CTSB-215ENST00000528965 PURBQ96QR8 312 aaKnown RBP18.33■□□□□ 0.52
CTSB-215ENST00000528965 GAS2L1Q99501 681 aaPredicted RBP18.33■□□□□ 0.52
CTSB-215ENST00000528965 MSRAQ9UJ68 235 aa18.33■□□□□ 0.52
CTSB-215ENST00000528965 NEDD4P46934 1319 aa18.32■□□□□ 0.52
CTSB-215ENST00000528965 B4GALT4O60513 344 aa18.32■□□□□ 0.52
CTSB-215ENST00000528965 FGBP02675 491 aa18.32■□□□□ 0.52
CTSB-215ENST00000528965 GRIN2CQ14957 1233 aa18.32■□□□□ 0.52
CTSB-215ENST00000528965 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
CTSB-215ENST00000528965 RPUSD2Q8IZ73 545 aaKnown RBP18.32■□□□□ 0.52
CTSB-215ENST00000528965 OR6J1Q8NGC5 347 aa18.32■□□□□ 0.52
CTSB-215ENST00000528965 CLEC4DQ8WXI8 215 aa18.32■□□□□ 0.52
CTSB-215ENST00000528965 NOC4LQ9BVI4 516 aaKnown RBP18.32■□□□□ 0.52
CTSB-215ENST00000528965 PBX4Q9BYU1 374 aa18.32■□□□□ 0.52
CTSB-215ENST00000528965 MAF1Q9H063 256 aa18.32■□□□□ 0.52
CTSB-215ENST00000528965 RBM47A0AV96 593 aaKnown RBP18.31■□□□□ 0.52
CTSB-215ENST00000528965 MYL3P08590 195 aa18.31■□□□□ 0.52
CTSB-215ENST00000528965 PSMC6P62333 389 aa18.31■□□□□ 0.52
CTSB-215ENST00000528965 RPS6P62753 249 aaKnown RBP18.31■□□□□ 0.52
CTSB-215ENST00000528965 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
CTSB-215ENST00000528965 MTG1Q9BT17 334 aaPredicted RBP18.31■□□□□ 0.52
CTSB-215ENST00000528965 TRPV6Q9H1D0 765 aa18.31■□□□□ 0.52
CTSB-215ENST00000528965 ALDH8A1Q9H2A2 487 aaPredicted RBP18.31■□□□□ 0.52
CTSB-215ENST00000528965 OSBPL3Q9H4L5 887 aa18.31■□□□□ 0.52
CTSB-215ENST00000528965 KAT14Q9H8E8 782 aa18.31■□□□□ 0.52
CTSB-215ENST00000528965 UNC80Q8N2C7 3258 aa18.31■□□□□ 0.52
CTSB-215ENST00000528965 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
CTSB-215ENST00000528965 GRIN2DO15399 1336 aa18.3■□□□□ 0.52
CTSB-215ENST00000528965 KPNA6O60684 536 aa18.3■□□□□ 0.52
CTSB-215ENST00000528965 PFKMP08237 780 aa18.3■□□□□ 0.52
CTSB-215ENST00000528965 PTGS1P23219 599 aa18.3■□□□□ 0.52
CTSB-215ENST00000528965 EDNRBP24530 442 aa18.3■□□□□ 0.52
CTSB-215ENST00000528965 CCL23P55773 120 aa18.3■□□□□ 0.52
CTSB-215ENST00000528965 PURAQ00577 322 aaKnown RBP18.3■□□□□ 0.52
CTSB-215ENST00000528965 USH1GQ495M9 461 aa18.3■□□□□ 0.52
CTSB-215ENST00000528965 PNMA1Q8ND90 353 aa18.3■□□□□ 0.52
CTSB-215ENST00000528965 RGS22Q8NE09 1264 aa18.3■□□□□ 0.52
CTSB-215ENST00000528965 TNKSO95271 1327 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 ABCB11O95342 1321 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 UMODL1Q5DID0 1318 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 GRXCR1A8MXD5 290 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 KDM4AO75164 1064 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 NUCB1Q02818 461 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 TTLL4Q14679 1199 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 CDC37Q16543 378 aaPredicted RBP18.29■□□□□ 0.52
CTSB-215ENST00000528965 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
CTSB-215ENST00000528965 ASPRV1Q53RT3 343 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 CWC27Q6UX04 472 aaKnown RBP18.29■□□□□ 0.52
CTSB-215ENST00000528965 PLEKHM2Q8IWE5 1019 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 SYMPKQ92797 1274 aaKnown RBP18.29■□□□□ 0.52
CTSB-215ENST00000528965 ZKSCAN3Q9BRR0 538 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 WNT8AQ9H1J5 351 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 CTNNA3Q9UI47 895 aa18.29■□□□□ 0.52
CTSB-215ENST00000528965 GOLGA8HP0CJ92 632 aa18.28■□□□□ 0.52
CTSB-215ENST00000528965 PBX2P40425 430 aa18.28■□□□□ 0.52
CTSB-215ENST00000528965 FAM47CQ5HY64 1035 aa18.28■□□□□ 0.52
CTSB-215ENST00000528965 TMEM63BQ5T3F8 832 aa18.28■□□□□ 0.52
CTSB-215ENST00000528965 OTOP2Q7RTS6 562 aa18.28■□□□□ 0.52
CTSB-215ENST00000528965 MCF2L2Q86YR7 1114 aa18.28■□□□□ 0.52
CTSB-215ENST00000528965 DSCC1Q9BVC3 393 aa18.28■□□□□ 0.52
CTSB-215ENST00000528965 KRT23Q9C075 422 aa18.28■□□□□ 0.52
CTSB-215ENST00000528965 SLC28A3Q9HAS3 691 aa18.28■□□□□ 0.52
CTSB-215ENST00000528965 CDH23Q9H251 3354 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms