RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 TRAPPC3O43617 180 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 SMNDC1O75940 238 aaKnown RBP eCLIP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 RTN3O95197 1032 aaPredicted RBP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 POLR3DP05423 398 aaPredicted RBP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 MYL1P05976 194 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 IDEP14735 1019 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 MAGEA8P43361 318 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 CCNHP51946 323 aaPredicted RBP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 CCT2P78371 535 aaKnown RBP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 LBRQ14739 615 aaKnown RBP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 MTF1Q14872 753 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 LONRF3Q496Y0 759 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 CFAP221Q4G0U5 840 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 TTMPQ5BVD1 217 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 MIS18BP1Q6P0N0 1132 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 APTXQ7Z2E3 356 aaKnown RBP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 RALYLQ86SE5 291 aaKnown RBP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 NBPF15Q8N660 670 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 ACRBPQ8NEB7 543 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 FERMT2Q96AC1 680 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 ACSBG1Q96GR2 724 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 CALR3Q96L12 384 aaKnown RBP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 FOXP1Q9H334 677 aaPredicted RBP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 GDF3Q9NR23 364 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 ANKIB1Q9P2G1 1089 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 CAPN11Q9UMQ6 739 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 GUCA1BQ9UMX6 200 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 SH3BP1Q9Y3L3 701 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 RIPOR2Q9Y4F9 1068 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 SRPRBQ9Y5M8 271 aaKnown RBP10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 BCL9LQ86UU0 1499 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 NEO1Q92859 1461 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 PIK3C2AO00443 1686 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 MAP3K19Q56UN5 1328 aa10.02□□□□□ -0.81
CAPRIN1-206ENST00000528948 A0A087WWV3 80 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 LRRD1A4D1F6 860 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 PI4KAP2A4QPH2 592 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 GOLGA8BA8MQT2 603 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 SH2B2O14492 632 aaPredicted RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 ZBTB24O43167 697 aaPredicted RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 ALADP13716 330 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 HSPA9P38646 679 aaKnown RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 DNM2P50570 870 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 ERVK-24P63145 666 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 TNNC1P63316 161 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 NEXNQ0ZGT2 675 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 MAP3K12Q12852 859 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 ITGB3BPQ13352 177 aaPredicted RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 CUL4BQ13620 913 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 BLMHQ13867 455 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 ZNF268Q14587 947 aaPredicted RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 SETDB1Q15047 1291 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 PPP2R5BQ15173 497 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 TTF1Q15361 905 aaPredicted RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 ZRSR2Q15696 482 aaKnown RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 ZMYM1Q5SVZ6 1142 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 CWF19L1Q69YN2 538 aaKnown RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 TMED8Q6PL24 325 aaPredicted RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 BZW1Q7L1Q6 419 aaKnown RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 PI4KAP1Q8N8J0 262 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 CCDC63Q8NA47 563 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 CCDC197Q8NCU1 140 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 SPATA4Q8NEY3 305 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 PRR7Q8TB68 274 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 DDX54Q8TDD1 881 aaKnown RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 HVCN1Q96D96 273 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 TMEM87BQ96K49 555 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 RNPC3Q96LT9 517 aaKnown RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 NEUROD6Q96NK8 337 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 ZIM3Q96PE6 472 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 ALG1Q9BT22 464 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 CCDC28BQ9BUN5 200 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 STMN4Q9H169 189 aaPredicted RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 TAF1DQ9H5J8 278 aaPredicted RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 TMBIM4Q9HC24 238 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 JADE2Q9NQC1 790 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 AATFQ9NY61 560 aaKnown RBP eCLIP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 RGL1Q9NZL6 768 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 RPL26L1Q9UNX3 145 aaKnown RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 CCDC9Q9Y3X0 531 aaKnown RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 USP54Q70EL1 1684 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 DDX60Q8IY21 1712 aaKnown RBP10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 PEAK1Q9H792 1746 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 NID2Q14112 1375 aa10.01□□□□□ -0.81
CAPRIN1-206ENST00000528948 USP6P35125 1406 aa10□□□□□ -0.81
CAPRIN1-206ENST00000528948 ARHGAP23Q9P227 1491 aa10□□□□□ -0.81
CAPRIN1-206ENST00000528948 RASSF10A6NK89 507 aa10□□□□□ -0.81
CAPRIN1-206ENST00000528948 NUTM2BA6NNL0 878 aaPredicted RBP10□□□□□ -0.81
CAPRIN1-206ENST00000528948 ENO4A6NNW6 628 aa10□□□□□ -0.81
CAPRIN1-206ENST00000528948 NUTM2EB1AL46 878 aaPredicted RBP10□□□□□ -0.81
CAPRIN1-206ENST00000528948 PPFIA2O75334 1257 aa10□□□□□ -0.81
CAPRIN1-206ENST00000528948 NPTXRO95502 500 aa10□□□□□ -0.81
CAPRIN1-206ENST00000528948 ATP1A1P05023 1023 aaKnown RBP10□□□□□ -0.81
CAPRIN1-206ENST00000528948 IMPDH2P12268 514 aa10□□□□□ -0.81
CAPRIN1-206ENST00000528948 XBP1P17861 261 aa10□□□□□ -0.81
CAPRIN1-206ENST00000528948 PAPOLAP51003 745 aaKnown RBP10□□□□□ -0.81
CAPRIN1-206ENST00000528948 COPB1P53618 953 aaKnown RBP10□□□□□ -0.81
CAPRIN1-206ENST00000528948 NLRP5P59047 1200 aa10□□□□□ -0.81
CAPRIN1-206ENST00000528948 ELF3P78545 371 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms