RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	MYL3	P08590	195 aa		13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	CALML3	P27482	149 aa		13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ADGRE1	Q14246	886 aa		13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	AKNAD1	Q5T1N1	836 aa		13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	SYDE2	Q5VT97	1194 aa		13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	EVI5L	Q96CN4	794 aa		13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	SCLY	Q96I15	445 aa		13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	TMEM47	Q9BQJ4	181 aa		13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	RANBP17	Q9H2T7	1088 aa	Known RBP	13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	YBX2	Q9Y2T7	364 aa	Known RBP	13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	SLC4A7	Q9Y6M7	1214 aa		13.42	□□□□□ -0.26
PTP4A2-211	ENST00000528840	EYS	Q5T1H1	3165 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	PTPDC1	A2A3K4	754 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	NFIB	O00712	420 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ORC4	O43929	436 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	FGA	P02671	866 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	FGR	P09769	529 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	TOP1	P11387	765 aa	Known RBP	13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	CYP2C9	P11712	490 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	MYOG	P15173	224 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	NOV	P48745	357 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ALDH5A1	P51649	535 aa	Predicted RBP	13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ALX1	Q15699	326 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	DUSP28	Q4G0W2	176 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	BTNL9	Q6UXG8	535 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	MORC4	Q8TE76	937 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	WNT8A	Q9H1J5	351 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	GPHN	Q9NQX3	736 aa	Predicted RBP	13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	HELLS	Q9NRZ9	838 aa		13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	TRMT13	Q9NUP7	481 aa	Known RBP	13.41	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ZBBX	A8MT70	800 aa		13.4	□□□□□ -0.26
PTP4A2-211	ENST00000528840	TNFRSF10A	O00220	468 aa		13.4	□□□□□ -0.26
PTP4A2-211	ENST00000528840	SUPT20HL2	P0C7V6	817 aa		13.4	□□□□□ -0.26
PTP4A2-211	ENST00000528840	OR6J1	Q8NGC5	347 aa		13.4	□□□□□ -0.26
PTP4A2-211	ENST00000528840	PPP1R13L	Q8WUF5	828 aa		13.4	□□□□□ -0.26
PTP4A2-211	ENST00000528840	FAM227B	Q96M60	508 aa		13.4	□□□□□ -0.26
PTP4A2-211	ENST00000528840	ASB2	Q96Q27	587 aa		13.4	□□□□□ -0.26
PTP4A2-211	ENST00000528840	POLR3E	Q9NVU0	708 aa		13.4	□□□□□ -0.26
PTP4A2-211	ENST00000528840	RBM47	A0AV96	593 aa	Known RBP	13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	CPT1A	P50416	773 aa		13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	PDE4D	Q08499	809 aa		13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	MCMDC2	Q4G0Z9	681 aa		13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	FAM47C	Q5HY64	1035 aa		13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	RNF207	Q6ZRF8	634 aa		13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	DEFB128	Q7Z7B8	93 aa		13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	CLEC4D	Q8WXI8	215 aa		13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	VWCE	Q96DN2	955 aa		13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	MTG1	Q9BT17	334 aa	Predicted RBP	13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	TCP11L1	Q9NUJ3	509 aa		13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	TNKS	O95271	1327 aa		13.39	□□□□□ -0.27
PTP4A2-211	ENST00000528840	CUL9	Q8IWT3	2517 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	ATP2A2	P16615	1042 aa	Known RBP	13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	PDE1A	P54750	535 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	CHMP4BP1	P59074	171 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	HAND2	P61296	217 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	MRPS5	P82675	430 aa	Known RBP	13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	PURA	Q00577	322 aa	Known RBP	13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	TTLL4	Q14679	1199 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	NBPF20	Q3BBV1	942 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	PPP2R2D	Q66LE6	453 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	SLC30A10	Q6XR72	485 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	TTC14	Q96N46	770 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	THEG	Q9P2T0	379 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	PCDHA11	Q9Y5I1	949 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	PRUNE2	Q8WUY3	3088 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	SALL3	Q9BXA9	1300 aa		13.38	□□□□□ -0.27
PTP4A2-211	ENST00000528840	HSPD1	P10809	573 aa	Known RBP	13.37	□□□□□ -0.27
PTP4A2-211	ENST00000528840	PDHB	P11177	359 aa		13.37	□□□□□ -0.27
PTP4A2-211	ENST00000528840	RPS6	P62753	249 aa	Known RBP	13.37	□□□□□ -0.27
PTP4A2-211	ENST00000528840	BRDT	Q58F21	947 aa	Predicted RBP	13.37	□□□□□ -0.27
PTP4A2-211	ENST00000528840	MFSD6	Q6ZSS7	791 aa		13.37	□□□□□ -0.27
PTP4A2-211	ENST00000528840	MICALL1	Q8N3F8	863 aa		13.37	□□□□□ -0.27
PTP4A2-211	ENST00000528840	RETREG2	Q8NC44	543 aa		13.37	□□□□□ -0.27
PTP4A2-211	ENST00000528840	COPS5	Q92905	334 aa		13.37	□□□□□ -0.27
PTP4A2-211	ENST00000528840	MPHOSPH6	Q99547	160 aa	Known RBP	13.37	□□□□□ -0.27
PTP4A2-211	ENST00000528840	CDH23	Q9H251	3354 aa		13.37	□□□□□ -0.27
PTP4A2-211	ENST00000528840	LOC102724159	A0A0B4J2E5	919 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840		A0A0D9SFI3	127 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	TRIM6-TRIM34	B2RNG4	842 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	RFXAP	O00287	272 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	KPNA6	O60684	536 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	GOLGA8H	P0CJ92	632 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	TXN	P10599	105 aa	Known RBP	13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	ZNF543	Q08ER8	600 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	NMI	Q13287	307 aa	Predicted RBP	13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	PWP2	Q15269	919 aa	Known RBP	13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	TMEM67	Q5HYA8	995 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	IL27	Q8NEV9	243 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	ADAMTS19	Q8TE59	1207 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	ZKSCAN3	Q9BRR0	538 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	UBA5	Q9GZZ9	404 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	CERS4	Q9HA82	394 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	PNMA2	Q9UL42	364 aa		13.36	□□□□□ -0.27
PTP4A2-211	ENST00000528840	MYO9B	Q13459	2157 aa		13.35	□□□□□ -0.27
PTP4A2-211	ENST00000528840		B4DLN1	442 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms