RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 SDCCAG8Q86SQ7 713 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-219ENST00000528621 MMS19Q96T76 1030 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 ZBTB24O43167 697 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-219ENST00000528621 XPOTO43592 962 aaKnown RBP9.3□□□□□ -0.92
CTNND1-219ENST00000528621 BUB1O43683 1085 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 TMOD1P28289 359 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 LTKP29376 864 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 POLR2FP61218 127 aaKnown RBP9.3□□□□□ -0.92
CTNND1-219ENST00000528621 LRRC8AQ8IWT6 810 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 FAM178BQ8IXR5 827 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 PPP4R1Q8TF05 950 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 CACYBPQ9HB71 228 aaKnown RBP9.3□□□□□ -0.92
CTNND1-219ENST00000528621 TMEM63CQ9P1W3 806 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 TACC3Q9Y6A5 838 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 MAP3K4Q9Y6R4 1608 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 ABCB4P21439 1286 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 CTNNA1P35221 906 aaKnown RBP9.3□□□□□ -0.92
CTNND1-219ENST00000528621 GARSP41250 739 aaKnown RBP9.3□□□□□ -0.92
CTNND1-219ENST00000528621 NDUFA8P51970 172 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 PSMD2Q13200 908 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 ADAM9Q13443 819 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 SH3GLB2Q9NR46 395 aa9.3□□□□□ -0.92
CTNND1-219ENST00000528621 ADORA1P30542 326 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ADCY8P40145 1251 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 SLC39A14Q15043 492 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 SCYL2Q6P3W7 929 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ANKRD35Q8N283 1001 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 AMNQ9BXJ7 453 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 SEPT10Q9P0V9 454 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 LARSQ9P2J5 1176 aaKnown RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 RGS16O15492 202 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ADD2P35612 726 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 COPB1P53618 953 aaKnown RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 VSIG1Q86XK7 387 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 CALR3Q96L12 384 aaKnown RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 CLIC6Q96NY7 704 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 FAM193BQ96PV7 902 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 SLC39A2Q9NP94 309 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 TTLL3Q9Y4R7 772 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ARAP3Q8WWN8 1544 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 PTCH1Q13635 1447 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 CASQ2O14958 399 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ALCAMQ13740 583 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 DPY19L2Q6NUT2 758 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ACCSQ96QU6 501 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 IPO11Q9UI26 975 aaKnown RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 PALD1Q9ULE6 856 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 A2ML1A8K2U0 1454 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 CAPN9O14815 690 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ATP8B1O43520 1251 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 BBOX1O75936 387 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 PHKA1P46020 1223 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 PRPSAP1Q14558 356 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 CDC37Q16543 378 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ZNF658Q5TYW1 1059 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ANO3Q9BYT9 981 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 DHX36Q9H2U1 1008 aaKnown RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 TMEM206Q9H813 350 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ST7Q9NRC1 585 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 HOMER3Q9NSC5 361 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 SEPT9Q9UHD8 586 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 LOC102724428A0A0B4J2F2 783 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 GOLGA8QA0A0J9YX86 632 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 A0A1B0GUA9 196 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 GOLGA8OA6NCC3 632 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 HMGB1P1B2RPK0 211 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 GOLGA8NF8WBI6 632 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 TLR3O15455 904 aaKnown RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 TMEM191BP0C7N4 346 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 SIK1P57059 783 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 PPP2R5CQ13362 524 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ERFEQ4G0M1 354 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 FAM26FQ5R3K3 315 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 KIAA0825Q8IV33 1275 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 TDRD7Q8NHU6 1098 aaKnown RBP9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ANKRD36BP1Q96IX9 119 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 SPZ1Q9BXG8 430 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 WDR11Q9BZH6 1224 aa9.29□□□□□ -0.92
CTNND1-219ENST00000528621 ATF2P15336 505 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 PSMC2P35998 433 aaKnown RBP9.28□□□□□ -0.92
CTNND1-219ENST00000528621 GUCY2FP51841 1108 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 FAM47CQ5HY64 1035 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 ARHGEF25Q86VW2 580 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 PRPF31Q8WWY3 499 aaKnown RBP9.28□□□□□ -0.92
CTNND1-219ENST00000528621 ATP6V0A1Q93050 837 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 CNOT6LQ96LI5 555 aaKnown RBP9.28□□□□□ -0.92
CTNND1-219ENST00000528621 PASKQ96RG2 1323 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 METP08581 1390 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 PLA2R1Q13018 1463 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 PRPF3O43395 683 aaKnown RBP9.28□□□□□ -0.92
CTNND1-219ENST00000528621 STX2P32856 288 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 PCK1P35558 622 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 ADD1P35611 737 aaKnown RBP9.28□□□□□ -0.92
CTNND1-219ENST00000528621 MGARPQ8TDB4 240 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 ZNF577Q9BSK1 485 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 THAP9Q9H5L6 903 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 MED4Q9NPJ6 270 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 ANKFY1Q9P2R3 1169 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 AFG3L2Q9Y4W6 797 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms