RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 PDE4DQ08499 809 aa16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 SART3Q15020 963 aaKnown RBP16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 SEC23AQ15436 765 aa16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 FSCN1Q16658 493 aaKnown RBP16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 IQSEC1Q6DN90 963 aa16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 KIAA1211Q6ZU35 1233 aa16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 ANKRD33Q7Z3H0 272 aa16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 NCOA7Q8NI08 942 aa16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 MORC4Q8TE76 937 aa16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 BADQ92934 168 aa16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 TRIM43Q96BQ3 446 aaPredicted RBP16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 TMEM39AQ9NV64 488 aa16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 GNEQ9Y223 722 aaKnown RBP16.21■□□□□ 0.19
CHRDL2-205ENST00000528471 B4DLN1 442 aa16.2■□□□□ 0.18
CHRDL2-205ENST00000528471 IFIT3O14879 490 aaKnown RBP16.2■□□□□ 0.18
CHRDL2-205ENST00000528471 DYNC1LI2O43237 492 aaPredicted RBP16.2■□□□□ 0.18
CHRDL2-205ENST00000528471 ZEB2O60315 1214 aa16.2■□□□□ 0.18
CHRDL2-205ENST00000528471 MRPL12P52815 198 aaKnown RBP16.2■□□□□ 0.18
CHRDL2-205ENST00000528471 QRICH1Q2TAL8 776 aa16.2■□□□□ 0.18
CHRDL2-205ENST00000528471 TAPT1Q6NXT6 567 aa16.2■□□□□ 0.18
CHRDL2-205ENST00000528471 FBXO11Q86XK2 927 aa16.2■□□□□ 0.18
CHRDL2-205ENST00000528471 DNERQ8NFT8 737 aa16.2■□□□□ 0.18
CHRDL2-205ENST00000528471 TOX2Q96NM4 488 aa16.2■□□□□ 0.18
CHRDL2-205ENST00000528471 E7EWF7 191 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 KIAA0355O15063 1070 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 CTAGE5O15320 804 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 NKX3-2P78367 333 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 WTAPQ15007 396 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 GPR153Q6NV75 609 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 CXCL17Q6UXB2 119 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 CENPQQ7L2Z9 268 aaPredicted RBP16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 MCF2L2Q86YR7 1114 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 RGS22Q8NE09 1264 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 WDR11Q9BZH6 1224 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 JMJD4Q9H9V9 463 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 Q9Y3F1 56 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 RBM8AQ9Y5S9 174 aaKnown RBP16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 ARVCFO00192 962 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 TLR3O15455 904 aaKnown RBP16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 CABYRO75952 493 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 PTGS1P23219 599 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 FAAP100Q0VG06 881 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 DUSP28Q4G0W2 176 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 STAG2Q8N3U4 1231 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 MAP4K1Q92918 833 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 MRPL11Q9Y3B7 192 aaKnown RBP16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 TAF6LQ9Y6J9 622 aa16.19■□□□□ 0.18
CHRDL2-205ENST00000528471 MYH7BA7E2Y1 1941 aa16.18■□□□□ 0.18
CHRDL2-205ENST00000528471 PPP2R5BQ15173 497 aa16.18■□□□□ 0.18
CHRDL2-205ENST00000528471 TMEM67Q5HYA8 995 aa16.18■□□□□ 0.18
CHRDL2-205ENST00000528471 STOX1Q6ZVD7 989 aa16.18■□□□□ 0.18
CHRDL2-205ENST00000528471 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
CHRDL2-205ENST00000528471 SCFD2Q8WU76 684 aa16.18■□□□□ 0.18
CHRDL2-205ENST00000528471 AMNQ9BXJ7 453 aa16.18■□□□□ 0.18
CHRDL2-205ENST00000528471 MAF1Q9H063 256 aa16.18■□□□□ 0.18
CHRDL2-205ENST00000528471 EDNRBP24530 442 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 ITGB8P26012 769 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 CPT1AP50416 773 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 CDK7P50613 346 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 FPGSQ05932 587 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 GRM4Q14833 912 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 SHHQ15465 462 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 CATIPQ7Z7H3 387 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 HOMER1Q86YM7 354 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 DEFB123Q8N688 67 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 OR6J1Q8NGC5 347 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 ESYT1Q9BSJ8 1104 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 MAD2L2Q9UI95 211 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 TBX21Q9UL17 535 aa16.17■□□□□ 0.18
CHRDL2-205ENST00000528471 SCN10AQ9Y5Y9 1956 aa16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 RBM47A0AV96 593 aaKnown RBP16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 PALM3A6NDB9 673 aaPredicted RBP16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 ITGA7Q13683 1181 aa16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 BRDTQ58F21 947 aaPredicted RBP16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 C9orf50Q5SZB4 431 aa16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 FAM126BQ8IXS8 530 aa16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 SYTL5Q8TDW5 730 aaPredicted RBP16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 NSUN6Q8TEA1 469 aaKnown RBP16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 RMDN3Q96TC7 470 aa16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 ANO2Q9NQ90 1003 aa16.16■□□□□ 0.18
CHRDL2-205ENST00000528471 ZBTB5O15062 677 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 NKRFO15226 690 aaKnown RBP eCLIP16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 CFBP00751 764 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 TIMP1P01033 207 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 TRAF1Q13077 416 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 TTLL4Q14679 1199 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 BMP2KLQ5H9B9 411 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 Q7L0L9 218 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 MB21D2Q8IYB1 491 aaPredicted RBP16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 TBC1D5Q92609 795 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 SEZ6LQ9BYH1 1024 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 SENP2Q9HC62 589 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 POLR3EQ9NVU0 708 aa16.15■□□□□ 0.18
CHRDL2-205ENST00000528471 MYL3P08590 195 aa16.14■□□□□ 0.17
CHRDL2-205ENST00000528471 TXNP10599 105 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms