RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ABCB11O95342 1321 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 SMCHD1A6NHR9 2005 aa10.57□□□□□ -0.72
CMTM1-210ENST00000528441 DNAJC25-GNG10A0A024R161 153 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 KLRF2D3W0D1 207 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 ZEB2O60315 1214 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 PQBP1O60828 265 aaKnown RBP10.56□□□□□ -0.72
CMTM1-210ENST00000528441 SNAI1O95863 264 aaPredicted RBP10.56□□□□□ -0.72
CMTM1-210ENST00000528441 NOVP48745 357 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 ALDH5A1P51649 535 aaPredicted RBP10.56□□□□□ -0.72
CMTM1-210ENST00000528441 TRIM60Q495X7 471 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 BMP2KLQ5H9B9 411 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 GNASQ5JWF2 1037 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 MAMDC4Q6UXC1 1216 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 MCF2L2Q86YR7 1114 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 FAM133AQ8N9E0 248 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 PCSK9Q8NBP7 692 aaKnown RBP10.56□□□□□ -0.72
CMTM1-210ENST00000528441 MRPL11Q9Y3B7 192 aaKnown RBP10.56□□□□□ -0.72
CMTM1-210ENST00000528441 WDR19Q8NEZ3 1342 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 SYNRGQ9UMZ2 1314 aa10.56□□□□□ -0.72
CMTM1-210ENST00000528441 SOWAHBA6NEL2 793 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 PRC1O43663 620 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 DUSP11O75319 330 aaKnown RBP10.55□□□□□ -0.72
CMTM1-210ENST00000528441 CFBP00751 764 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 SNHG28P0DPA3 235 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 KIF5BP33176 963 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 MCM5P33992 734 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 CHMP4BP1P59074 171 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 RPS6P62753 249 aaKnown RBP10.55□□□□□ -0.72
CMTM1-210ENST00000528441 TRAF1Q13077 416 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 QRICH1Q2TAL8 776 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 BRDTQ58F21 947 aaPredicted RBP10.55□□□□□ -0.72
CMTM1-210ENST00000528441 ARHGEF16Q5VV41 709 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 SLC39A5Q6ZMH5 540 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 TLK2Q86UE8 772 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 MAP4K1Q92918 833 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
CMTM1-210ENST00000528441 AMNQ9BXJ7 453 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 VTA1Q9NP79 307 aa10.55□□□□□ -0.72
CMTM1-210ENST00000528441 GPHNQ9NQX3 736 aaPredicted RBP10.55□□□□□ -0.72
CMTM1-210ENST00000528441 RBM27Q9P2N5 1060 aaKnown RBP10.55□□□□□ -0.72
CMTM1-210ENST00000528441 SEC63Q9UGP8 760 aaKnown RBP10.55□□□□□ -0.72
CMTM1-210ENST00000528441 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
CMTM1-210ENST00000528441 A0A1W2PQ45 241 aaPredicted RBP10.54□□□□□ -0.72
CMTM1-210ENST00000528441 A0A1W2PQY0 241 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 MOXD2PA6NHM9 499 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 SLC27A2O14975 620 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 TLR3O15455 904 aaKnown RBP10.54□□□□□ -0.72
CMTM1-210ENST00000528441 DYNC1LI2O43237 492 aaPredicted RBP10.54□□□□□ -0.72
CMTM1-210ENST00000528441 COL6A1P12109 1028 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 MAGEA10P43363 369 aaPredicted RBP10.54□□□□□ -0.72
CMTM1-210ENST00000528441 PSEN1P49768 467 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 BEX3Q00994 111 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 PPP2R5BQ15173 497 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 KCNA10Q16322 511 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 CREB3L3Q68CJ9 461 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 RAB11FIP4Q86YS3 637 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 STAG2Q8N3U4 1231 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 OR6J1Q8NGC5 347 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 ANKS1AQ92625 1134 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 MYL10Q9BUA6 226 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 LRRC2Q9BYS8 371 aa10.54□□□□□ -0.72
CMTM1-210ENST00000528441 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.53□□□□□ -0.72
CMTM1-210ENST00000528441 DCDC2CA8MYV0 355 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 ASGR1P07306 291 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 MYL3P08590 195 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 RAG1P15918 1043 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 EIF2AK2P19525 551 aaKnown RBP10.53□□□□□ -0.72
CMTM1-210ENST00000528441 ACLYP53396 1101 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
CMTM1-210ENST00000528441 GRM4Q14833 912 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 SEC23AQ15436 765 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 STOX1Q6ZVD7 989 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.53□□□□□ -0.72
CMTM1-210ENST00000528441 ZNF654Q8IZM8 581 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 TMEM87BQ96K49 555 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 FGD4Q96M96 766 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 TSEN34Q9BSV6 310 aaKnown RBP10.53□□□□□ -0.72
CMTM1-210ENST00000528441 WDR11Q9BZH6 1224 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 LSG1Q9H089 658 aaKnown RBP10.53□□□□□ -0.72
CMTM1-210ENST00000528441 JMJD4Q9H9V9 463 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 PDGFCQ9NRA1 345 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 PCDH10Q9P2E7 1040 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 PHF24Q9UPV7 400 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 PCDHA1Q9Y5I3 950 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 SLC12A7Q9Y666 1083 aa10.53□□□□□ -0.72
CMTM1-210ENST00000528441 A0A0U1RQG5 324 aaPredicted RBP10.52□□□□□ -0.73
CMTM1-210ENST00000528441 MYADML2A6NDP7 307 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 ZBTB5O15062 677 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 ADAMTS4O75173 837 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 DDAH1O94760 285 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 CLTBP09497 229 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 MYCLP12524 364 aaPredicted RBP10.52□□□□□ -0.73
CMTM1-210ENST00000528441 RXRAP19793 462 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 GNAQP50148 359 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 TLE2Q04725 743 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 FSCN1Q16658 493 aaKnown RBP10.52□□□□□ -0.73
CMTM1-210ENST00000528441 FAM47CQ5HY64 1035 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 IQSEC1Q6DN90 963 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 SEPT14Q6ZU15 432 aa10.52□□□□□ -0.73
CMTM1-210ENST00000528441 FCHSD1Q86WN1 690 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms