RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PTPREP23469 700 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 TGFB2P61812 414 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 QRICH1Q2TAL8 776 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 FAM160B1Q5W0V3 765 aa16.71■□□□□ 0.27
USP47-207ENST00000527733 EIF2AK2P19525 551 aaKnown RBP16.71■□□□□ 0.26
USP47-207ENST00000527733 RPS12P25398 132 aaKnown RBP16.71■□□□□ 0.26
USP47-207ENST00000527733 CCND2P30279 289 aa16.71■□□□□ 0.26
USP47-207ENST00000527733 CKAP4Q07065 602 aaKnown RBP16.71■□□□□ 0.26
USP47-207ENST00000527733 TRPC3Q13507 836 aa16.71■□□□□ 0.26
USP47-207ENST00000527733 C2orf69Q8N8R5 385 aa16.71■□□□□ 0.26
USP47-207ENST00000527733 RASA1P20936 1047 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 ANTXR2P58335 489 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 SPECC1LQ69YQ0 1117 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 RNF207Q6ZRF8 634 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 PDCL2Q8N4E4 241 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 TRIM6Q9C030 488 aaPredicted RBP16.7■□□□□ 0.26
USP47-207ENST00000527733 ZSWIM4Q9H7M6 989 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 ANAPC4Q9UJX5 808 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 DHX37Q8IY37 1157 aaKnown RBP16.7■□□□□ 0.26
USP47-207ENST00000527733 ADGRF4Q8IZF3 695 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 STAG2Q8N3U4 1231 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 MSANTD4Q8NCY6 345 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 NACC1Q96RE7 527 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 SPZ1Q9BXG8 430 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 TAF6LQ9Y6J9 622 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 CTAGE9A4FU28 777 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 KCNJ18B7U540 433 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 DDR1Q08345 913 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 KCNJ12Q14500 433 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 OXER1Q8TDS5 423 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 FANCLQ9NW38 375 aa16.7■□□□□ 0.26
USP47-207ENST00000527733 ERCC5P28715 1186 aaPredicted RBP16.69■□□□□ 0.26
USP47-207ENST00000527733 FAM193AP78312 1265 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 CYP26C1Q6V0L0 522 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 ZBTB8OSQ8IWT0 167 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 SRBD1Q8N5C6 995 aaKnown RBP16.69■□□□□ 0.26
USP47-207ENST00000527733 METTL13Q8N6R0 699 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 FBXO41Q8TF61 875 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 KIFAP3Q92845 792 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 EPSTI1Q96J88 318 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 ARMCX3Q9UH62 379 aaPredicted RBP16.69■□□□□ 0.26
USP47-207ENST00000527733 PCDHA6Q9UN73 950 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 PCDHA8Q9Y5H6 950 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 USP17L15C9J2P7 530 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 USP17L13C9JLJ4 530 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 USP17L11C9JVI0 530 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 USP17L18D6R9N7 530 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 USP17L22D6RA61 530 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 USP17L17D6RBQ6 530 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 USP17L19D6RCP7 530 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 USP17L20D6RJB6 530 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 K7ENM7 598 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 FDX1P10109 184 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 CLCN1P35523 988 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 USP17L24Q0WX57 530 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 USP17L6PQ6QN14 398 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 SELENOOQ9BVL4 669 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 NYAP2Q9P242 653 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 FBXO40Q9UH90 709 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 KIF4AO95239 1232 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 XRCC5P13010 732 aaKnown RBP16.69■□□□□ 0.26
USP47-207ENST00000527733 ODR4Q5SWX8 454 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 UTP14CQ5TAP6 766 aaKnown RBP16.69■□□□□ 0.26
USP47-207ENST00000527733 DPH6Q7L8W6 267 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 TMTC1Q8IUR5 882 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 RDH13Q8NBN7 331 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 IQCDQ96DY2 449 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 SUGCTQ9HAC7 445 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 HOXA10P31260 410 aaPredicted RBP16.69■□□□□ 0.26
USP47-207ENST00000527733 GMPSP49915 693 aaPredicted RBP16.69■□□□□ 0.26
USP47-207ENST00000527733 POLGP54098 1239 aaPredicted RBP16.69■□□□□ 0.26
USP47-207ENST00000527733 SEPT14Q6ZU15 432 aa16.69■□□□□ 0.26
USP47-207ENST00000527733 KRT5P13647 590 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 CCDC122Q5T0U0 273 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 GOLGA6L10A0A0M3HER8 536 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 M0QZ92 97 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 CYP2J2P51589 502 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 SLC9C1Q4G0N8 1177 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 CCDC102AQ96A19 550 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 RIOK1Q9BRS2 568 aaKnown RBP16.68■□□□□ 0.26
USP47-207ENST00000527733 LRRC4BQ9NT99 713 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 STX10O60499 249 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 AKAP12Q02952 1782 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 NEFHP12036 1026 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 TNFAIP3P21580 790 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 ZNF543Q08ER8 600 aa16.68■□□□□ 0.26
USP47-207ENST00000527733 DMP1Q13316 513 aaPredicted RBP16.68■□□□□ 0.26
USP47-207ENST00000527733 HLTFQ14527 1009 aaKnown RBP eCLIP16.68■□□□□ 0.269e-7■■■□□ 18.1
USP47-207ENST00000527733 RAVER2Q9HCJ3 691 aaKnown RBP16.68■□□□□ 0.26
USP47-207ENST00000527733 ABCB11O95342 1321 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 CTAGE15A4D2H0 777 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 ARHGAP6O43182 974 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 CTAGE8P0CG41 777 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 PLCG1P19174 1290 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 MKRN3Q13064 507 aaKnown RBP16.67■□□□□ 0.26
USP47-207ENST00000527733 ASIC2Q16515 512 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 LONRF3Q496Y0 759 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 ZNF569Q5MCW4 686 aa16.67■□□□□ 0.26
USP47-207ENST00000527733 CTAGE6Q86UF2 777 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms