RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 SLC35G1Q2M3R5 365 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 NSMFQ6X4W1 530 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 Q6ZUG5 572 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 RUFY3Q7L099 469 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 MICU3Q86XE3 530 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 FAM133AQ8N9E0 248 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 FANCBQ8NB91 859 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 CLEC4DQ8WXI8 215 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 TINF2Q9BSI4 451 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 SPZ1Q9BXG8 430 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 ZSWIM6Q9HCJ5 1215 aa20.13■□□□□ 0.81
LTBP3-208ENST00000527339 SYNGAP1Q96PV0 1343 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 ZBTB43O43298 467 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 CYBAP13498 195 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 RXRAP19793 462 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 RCAN1P53805 252 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 ATN1P54259 1190 aaPredicted RBP20.12■□□□□ 0.81
LTBP3-208ENST00000527339 ANAPC15P60006 121 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 TRAF1Q13077 416 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 MAMDC4Q6UXC1 1216 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 HOMER1Q86YM7 354 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 GUCD1Q96NT3 240 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 AMNQ9BXJ7 453 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 AGXT2Q9BYV1 514 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 MAF1Q9H063 256 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 DDX20Q9UHI6 824 aaKnown RBP20.12■□□□□ 0.81
LTBP3-208ENST00000527339 NRBP1Q9UHY1 535 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 BRPF3Q9ULD4 1205 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 CYP46A1Q9Y6A2 500 aa20.12■□□□□ 0.81
LTBP3-208ENST00000527339 KLF18A0A0U1RQI7 1052 aa20.11■□□□□ 0.81
LTBP3-208ENST00000527339 CNTN2Q02246 1040 aa20.11■□□□□ 0.81
LTBP3-208ENST00000527339 C8orf34Q49A92 452 aa20.11■□□□□ 0.81
LTBP3-208ENST00000527339 RAB11FIP4Q86YS3 637 aa20.11■□□□□ 0.81
LTBP3-208ENST00000527339 CCDC144CPQ8IYA2 1237 aa20.11■□□□□ 0.81
LTBP3-208ENST00000527339 RGS22Q8NE09 1264 aa20.11■□□□□ 0.81
LTBP3-208ENST00000527339 BRF1Q92994 677 aa20.11■□□□□ 0.81
LTBP3-208ENST00000527339 FGD4Q96M96 766 aa20.11■□□□□ 0.81
LTBP3-208ENST00000527339 PIGSQ96S52 555 aa20.11■□□□□ 0.81
LTBP3-208ENST00000527339 RBM28Q9NW13 759 aaKnown RBP20.11■□□□□ 0.81
LTBP3-208ENST00000527339 MRPL11Q9Y3B7 192 aaKnown RBP20.11■□□□□ 0.81
LTBP3-208ENST00000527339 PNMA6FA0A0J9YX94 578 aa20.1■□□□□ 0.81
LTBP3-208ENST00000527339 PTPDC1A2A3K4 754 aa20.1■□□□□ 0.81
LTBP3-208ENST00000527339 PLEKHA8P1O95397 391 aa20.1■□□□□ 0.81
LTBP3-208ENST00000527339 SEC24BO95487 1268 aa20.1■□□□□ 0.81
LTBP3-208ENST00000527339 BAATQ14032 418 aaPredicted RBP20.1■□□□□ 0.81
LTBP3-208ENST00000527339 RNF207Q6ZRF8 634 aa20.1■□□□□ 0.81
LTBP3-208ENST00000527339 TMTC3Q6ZXV5 915 aa20.1■□□□□ 0.81
LTBP3-208ENST00000527339 SRBD1Q8N5C6 995 aaKnown RBP20.1■□□□□ 0.81
LTBP3-208ENST00000527339 PPP1R11O60927 126 aaPredicted RBP20.09■□□□□ 0.81
LTBP3-208ENST00000527339 CNGA1P29973 690 aa20.09■□□□□ 0.81
LTBP3-208ENST00000527339 APOBRQ0VD83 1088 aa20.09■□□□□ 0.81
LTBP3-208ENST00000527339 RTN1Q16799 776 aa20.09■□□□□ 0.81
LTBP3-208ENST00000527339 ANO1Q5XXA6 986 aa20.09■□□□□ 0.81
LTBP3-208ENST00000527339 MCF2L2Q86YR7 1114 aa20.09■□□□□ 0.81
LTBP3-208ENST00000527339 RRP36Q96EU6 259 aaKnown RBP20.09■□□□□ 0.81
LTBP3-208ENST00000527339 FAM161BQ96MY7 647 aa20.09■□□□□ 0.81
LTBP3-208ENST00000527339 PCDHA1Q9Y5I3 950 aa20.09■□□□□ 0.81
LTBP3-208ENST00000527339 GTF3C3Q9Y5Q9 886 aa20.09■□□□□ 0.81
LTBP3-208ENST00000527339 LTBP2Q14767 1821 aa20.09■□□□□ 0.81
LTBP3-208ENST00000527339 LRRC37A2A6NM11 1700 aa20.08■□□□□ 0.81
LTBP3-208ENST00000527339 SOWAHBA6NEL2 793 aa20.08■□□□□ 0.81
LTBP3-208ENST00000527339 ASB14A6NK59 587 aa20.08■□□□□ 0.81
LTBP3-208ENST00000527339 GOLGA8AA7E2F4 631 aa20.08■□□□□ 0.81
LTBP3-208ENST00000527339 GOLGA8BA8MQT2 603 aa20.08■□□□□ 0.81
LTBP3-208ENST00000527339 MSCO60682 206 aa20.08■□□□□ 0.81
LTBP3-208ENST00000527339 RPS6P62753 249 aaKnown RBP20.08■□□□□ 0.81
LTBP3-208ENST00000527339 PPP2R5BQ15173 497 aa20.08■□□□□ 0.81
LTBP3-208ENST00000527339 GJC2Q5T442 439 aaPredicted RBP20.08■□□□□ 0.81
LTBP3-208ENST00000527339 SLC30A10Q6XR72 485 aa20.08■□□□□ 0.81
LTBP3-208ENST00000527339 IL17RAQ96F46 866 aa20.08■□□□□ 0.81
LTBP3-208ENST00000527339 UPF3BQ9BZI7 483 aaKnown RBP20.08■□□□□ 0.81
LTBP3-208ENST00000527339 ADD3Q9UEY8 706 aaKnown RBP20.08■□□□□ 0.81
LTBP3-208ENST00000527339 SEC63Q9UGP8 760 aaKnown RBP20.08■□□□□ 0.81
LTBP3-208ENST00000527339 CNPY2Q9Y2B0 182 aa20.08■□□□□ 0.81
LTBP3-208ENST00000527339 LOC102724159A0A0B4J2E5 919 aa20.07■□□□□ 0.8
LTBP3-208ENST00000527339 SEPT4O43236 478 aa20.07■□□□□ 0.8
LTBP3-208ENST00000527339 RTP1P59025 263 aa20.07■□□□□ 0.8
LTBP3-208ENST00000527339 PWP2Q15269 919 aaKnown RBP20.07■□□□□ 0.8
LTBP3-208ENST00000527339 PRAMEF19Q5SWL8 479 aa20.07■□□□□ 0.8
LTBP3-208ENST00000527339 ARMCX2Q7L311 632 aa20.07■□□□□ 0.8
LTBP3-208ENST00000527339 COL25A1Q9BXS0 654 aaPredicted RBP20.07■□□□□ 0.8
LTBP3-208ENST00000527339 NAP1L2Q9ULW6 460 aaPredicted RBP20.07■□□□□ 0.8
LTBP3-208ENST00000527339 NID2Q14112 1375 aa20.07■□□□□ 0.8
LTBP3-208ENST00000527339 ASTN1O14525 1302 aa20.06■□□□□ 0.8
LTBP3-208ENST00000527339 DNM1LO00429 736 aa20.06■□□□□ 0.8
LTBP3-208ENST00000527339 SNAI1O95863 264 aaPredicted RBP20.06■□□□□ 0.8
LTBP3-208ENST00000527339 CALML3P27482 149 aa20.06■□□□□ 0.8
LTBP3-208ENST00000527339 METAP2P50579 478 aaKnown RBP eCLIP20.06■□□□□ 0.8
LTBP3-208ENST00000527339 EVCP57679 992 aa20.06■□□□□ 0.8
LTBP3-208ENST00000527339 TOB2Q14106 344 aaPredicted RBP20.06■□□□□ 0.8
LTBP3-208ENST00000527339 CMTR1Q8N1G2 835 aaKnown RBP20.06■□□□□ 0.8
LTBP3-208ENST00000527339 SAMD3Q8N6K7 520 aa20.06■□□□□ 0.8
LTBP3-208ENST00000527339 PIBF1Q8WXW3 757 aa20.06■□□□□ 0.8
LTBP3-208ENST00000527339 ABHD16BQ9H3Z7 469 aa20.06■□□□□ 0.8
LTBP3-208ENST00000527339 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.06■□□□□ 0.8
LTBP3-208ENST00000527339 CCDC196A0A1B0GTZ2 297 aa20.05■□□□□ 0.8
LTBP3-208ENST00000527339 ZNF865P0CJ78 1059 aaPredicted RBP20.05■□□□□ 0.8
LTBP3-208ENST00000527339 ALDH5A1P51649 535 aaPredicted RBP20.05■□□□□ 0.8
LTBP3-208ENST00000527339 GHRHRQ02643 423 aa20.05■□□□□ 0.8
LTBP3-208ENST00000527339 C9orf50Q5SZB4 431 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms