RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CTU1Q7Z7A3 348 aaKnown RBP12.43□□□□□ -0.42
NEDD8-205ENST00000527046 NUDT12Q9BQG2 462 aa12.43□□□□□ -0.42
NEDD8-205ENST00000527046 MAF1Q9H063 256 aa12.43□□□□□ -0.42
NEDD8-205ENST00000527046 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
NEDD8-205ENST00000527046 VPS54Q9P1Q0 977 aa12.43□□□□□ -0.42
NEDD8-205ENST00000527046 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-205ENST00000527046 PTCH2Q9Y6C5 1203 aa12.43□□□□□ -0.42
NEDD8-205ENST00000527046 ESYT2A0FGR8 921 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 K7ELQ4 463 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-205ENST00000527046 PIK3CDO00329 1044 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 HOXA13P31271 388 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-205ENST00000527046 TRIM32Q13049 653 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 KCTD2Q14681 263 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 COL13A1Q5TAT6 717 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-205ENST00000527046 WDR78Q5VTH9 848 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 MAMDC4Q6UXC1 1216 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 NSMFQ6X4W1 530 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 RNF207Q6ZRF8 634 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 HEATR3Q7Z4Q2 680 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 ANKRD35Q8N283 1001 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 MORC4Q8TE76 937 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 TRIB2Q92519 343 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 MAML3Q96JK9 1138 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 KATNBL1Q9H079 304 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 RIC8AQ9NPQ8 531 aa12.42□□□□□ -0.42
NEDD8-205ENST00000527046 SEC63Q9UGP8 760 aaKnown RBP12.42□□□□□ -0.42
NEDD8-205ENST00000527046 DIS3Q9Y2L1 958 aaKnown RBP12.42□□□□□ -0.42
NEDD8-205ENST00000527046 SMCO2A6NFE2 343 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 hCG_1984214I3L0E3 225 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 SNAI1O95863 264 aaPredicted RBP12.41□□□□□ -0.42
NEDD8-205ENST00000527046 CFBP00751 764 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 PRMT2P55345 433 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 SAMD3Q8N6K7 520 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 ZNF713Q8N859 430 aaPredicted RBP12.41□□□□□ -0.42
NEDD8-205ENST00000527046 PXYLP1Q8TE99 480 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 CRYGNQ8WXF5 182 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 SOCS4Q8WXH5 440 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 PHF20Q9BVI0 1012 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 PSTPIP2Q9H939 334 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 SH3GLB2Q9NR46 395 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 TMEM260Q9NX78 707 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 MAP3K20Q9NYL2 800 aaKnown RBP12.41□□□□□ -0.42
NEDD8-205ENST00000527046 RBM27Q9P2N5 1060 aaKnown RBP12.41□□□□□ -0.42
NEDD8-205ENST00000527046 KCNJ14Q9UNX9 436 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 IVNS1ABPQ9Y6Y0 642 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 MCM3APO60318 1980 aa12.41□□□□□ -0.42
NEDD8-205ENST00000527046 RBBP6Q7Z6E9 1792 aaKnown RBP12.41□□□□□ -0.42
NEDD8-205ENST00000527046 RPTORQ8N122 1335 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 CDKL5O76039 1030 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 ELNP15502 786 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 EDNRBP24530 442 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 CALML3P27482 149 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 HOXD10P28358 340 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 RGS2P41220 211 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 NAPAP54920 295 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 UBE2SQ16763 222 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 CPLX2Q6PUV4 134 aaKnown RBP12.4□□□□□ -0.42
NEDD8-205ENST00000527046 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.42
NEDD8-205ENST00000527046 MCF2L2Q86YR7 1114 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 CCAR1Q8IX12 1150 aaKnown RBP12.4□□□□□ -0.42
NEDD8-205ENST00000527046 TRIM22Q8IYM9 498 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 TRPV1Q8NER1 839 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 IL31RAQ8NI17 732 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 TNFRSF25Q93038 417 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 ALG1Q9BT22 464 aa12.4□□□□□ -0.42
NEDD8-205ENST00000527046 PFASO15067 1338 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 FRMPD4Q14CM0 1322 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 GCOM1H8Y6P7 765 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-205ENST00000527046 ADCY3O60266 1144 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 RGS20O76081 388 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 POLR2MP0CAP2 368 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 ALDH5A1P51649 535 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-205ENST00000527046 TRAF1Q13077 416 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 EARS2Q5JPH6 523 aaKnown RBP12.39□□□□□ -0.43
NEDD8-205ENST00000527046 PRAMEF19Q5SWL8 479 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 TMEM63BQ5T3F8 832 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 MAP3K21Q5TCX8 1036 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 OLFML2BQ68BL8 750 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 PPP1R18Q6NYC8 613 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 FBXO46Q6PJ61 603 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-205ENST00000527046 DPP9Q86TI2 863 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 APBA2Q99767 749 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 MCOLN1Q9GZU1 580 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 TSHZ2Q9NRE2 1034 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 BIN2Q9UBW5 565 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-205ENST00000527046 PCDHA6Q9UN73 950 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 PCDHA8Q9Y5H6 950 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 LRRC37A2A6NM11 1700 aa12.39□□□□□ -0.43
NEDD8-205ENST00000527046 POTEFA5A3E0 1075 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 ZNF865P0CJ78 1059 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-205ENST00000527046 GJB2P29033 226 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 CYP2C19P33261 490 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 MRPS9P82933 396 aaKnown RBP12.38□□□□□ -0.43
NEDD8-205ENST00000527046 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
NEDD8-205ENST00000527046 ARHGEF6Q15052 776 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 KRT40Q6A162 431 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 VSIG10LQ86VR7 867 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 FCHSD1Q86WN1 690 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms