RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 FXR2P51116 673 aaKnown RBP eCLIP19.7■□□□□ 0.74
USH1C-205ENST00000527020 CALCRLQ16602 461 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 ANKRD40Q6AI12 368 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 TTBK2Q6IQ55 1244 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 P2RX5Q93086 422 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 CHP1Q99653 195 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 EPC1Q9H2F5 836 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 QTRT2Q9H974 415 aaKnown RBP19.7■□□□□ 0.74
USH1C-205ENST00000527020 EXOC1Q9NV70 894 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 SWAP70Q9UH65 585 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 HSPA1LP34931 641 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 APOBEC3HQ6NTF7 200 aaKnown RBP19.7■□□□□ 0.74
USH1C-205ENST00000527020 ADGRF4Q8IZF3 695 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 CSGALNACT2Q8N6G5 542 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 KIAA0895Q8NCT3 520 aa19.7■□□□□ 0.74
USH1C-205ENST00000527020 NOC3LQ8WTT2 800 aaKnown RBP19.7■□□□□ 0.74
USH1C-205ENST00000527020 KIF5CO60282 957 aa19.69■□□□□ 0.74
USH1C-205ENST00000527020 HPS3Q969F9 1004 aa19.69■□□□□ 0.74
USH1C-205ENST00000527020 DNAJC7Q99615 494 aa19.69■□□□□ 0.74
USH1C-205ENST00000527020 REXO2Q9Y3B8 237 aaKnown RBP19.69■□□□□ 0.74
USH1C-205ENST00000527020 FHOD1Q9Y613 1164 aa19.69■□□□□ 0.74
USH1C-205ENST00000527020 ZNF646O15015 1829 aaPredicted RBP19.69■□□□□ 0.74
USH1C-205ENST00000527020 PNMA6FA0A0J9YX94 578 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 ZRANB2O95218 330 aaKnown RBP eCLIP19.68■□□□□ 0.74
USH1C-205ENST00000527020 NPR1P16066 1061 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 CLK2P49760 499 aaKnown RBP19.68■□□□□ 0.74
USH1C-205ENST00000527020 DMTNQ08495 405 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 COBLL1Q53SF7 1204 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 ZNF569Q5MCW4 686 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 KRT222Q8N1A0 295 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 EEF2KMTQ96G04 330 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 CALML4Q96GE6 196 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 TUBGCP2Q9BSJ2 902 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 RIC8AQ9NPQ8 531 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 RASSF10A6NK89 507 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 B4DLN1 442 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 NFIAQ12857 509 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 HHIPL2Q6UWX4 724 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 KRT27Q7Z3Y8 459 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 SLF1Q9BQI6 1058 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 LRWD1Q9UFC0 647 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 CAPN11Q9UMQ6 739 aa19.68■□□□□ 0.74
USH1C-205ENST00000527020 MYMKA6NI61 221 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 NKRFO15226 690 aaKnown RBP eCLIP19.67■□□□□ 0.74
USH1C-205ENST00000527020 DNM2P50570 870 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 AMPD3Q01432 767 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 UBE2SQ16763 222 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 PPP1R18Q6NYC8 613 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 WDR59Q6PJI9 974 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 ZFPM1Q8IX07 1006 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 OR8K1Q8NGG5 319 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 CCDC47Q96A33 483 aaKnown RBP19.67■□□□□ 0.74
USH1C-205ENST00000527020 NUDT12Q9BQG2 462 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 TTYH3Q9C0H2 523 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 SEMA6BQ9H3T3 888 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 MAGEC2Q9UBF1 373 aaPredicted RBP19.67■□□□□ 0.74
USH1C-205ENST00000527020 SCN9AQ15858 1988 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 BICDL2A1A5D9 508 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 POTEMA6NI47 508 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 MCM6Q14566 821 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 SLC35F6Q8N357 371 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 MTMR8Q96EF0 704 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 DNAJC18Q9H819 358 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 STK17AQ9UEE5 414 aa19.67■□□□□ 0.74
USH1C-205ENST00000527020 SLC16A2P36021 539 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 MIIPQ5JXC2 388 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 TEX35Q5T0J7 233 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 SV2BQ7L1I2 683 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 COL23A1Q86Y22 540 aaPredicted RBP19.66■□□□□ 0.74
USH1C-205ENST00000527020 CNOT6LQ96LI5 555 aaKnown RBP19.66■□□□□ 0.74
USH1C-205ENST00000527020 LUC7L2Q9Y383 392 aaKnown RBP19.66■□□□□ 0.74
USH1C-205ENST00000527020 USP17L10C9JJH3 530 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 PES1O00541 588 aaKnown RBP19.66■□□□□ 0.74
USH1C-205ENST00000527020 NDUFA10O95299 355 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 TNNI2P48788 182 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 PDIA5Q14554 519 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 CNNM4Q6P4Q7 775 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 GPR161Q8N6U8 529 aaKnown RBP19.66■□□□□ 0.74
USH1C-205ENST00000527020 TEKT1Q969V4 418 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 KCNQ5Q9NR82 932 aa19.66■□□□□ 0.74
USH1C-205ENST00000527020 EPN1Q9Y6I3 576 aaPredicted RBP19.66■□□□□ 0.74
USH1C-205ENST00000527020 PPP1R2P41236 205 aa19.65■□□□□ 0.74
USH1C-205ENST00000527020 KLK7P49862 253 aa19.65■□□□□ 0.74
USH1C-205ENST00000527020 BMS1Q14692 1282 aaKnown RBP19.65■□□□□ 0.74
USH1C-205ENST00000527020 PPP4R3AQ6IN85 833 aa19.65■□□□□ 0.74
USH1C-205ENST00000527020 CENPPQ6IPU0 288 aa19.65■□□□□ 0.74
USH1C-205ENST00000527020 KCTD1Q719H9 257 aa19.65■□□□□ 0.74
USH1C-205ENST00000527020 KCNK18Q7Z418 384 aa19.65■□□□□ 0.74
USH1C-205ENST00000527020 LARP4BQ92615 738 aaKnown RBP19.65■□□□□ 0.74
USH1C-205ENST00000527020 GTPBP4Q9BZE4 634 aaKnown RBP19.65■□□□□ 0.74
USH1C-205ENST00000527020 SLC39A2Q9NP94 309 aa19.65■□□□□ 0.74
USH1C-205ENST00000527020 CDC23Q9UJX2 597 aa19.65■□□□□ 0.74
USH1C-205ENST00000527020 PNMA6AP0CW24 399 aaPredicted RBP19.64■□□□□ 0.74
USH1C-205ENST00000527020 TMEM266Q2M3C6 531 aa19.64■□□□□ 0.74
USH1C-205ENST00000527020 TMEM119Q4V9L6 283 aa19.64■□□□□ 0.74
USH1C-205ENST00000527020 ZSCAN29Q8IWY8 852 aaPredicted RBP19.64■□□□□ 0.74
USH1C-205ENST00000527020 NLGN1Q8N2Q7 840 aa19.64■□□□□ 0.74
USH1C-205ENST00000527020 RABGGTAQ92696 567 aa19.64■□□□□ 0.74
USH1C-205ENST00000527020 HAS1Q92839 578 aa19.64■□□□□ 0.74
USH1C-205ENST00000527020 EHD4Q9H223 541 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms