RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 CCDC96Q2M329 555 aa18.99■□□□□ 0.63
CHEK1-209ENST00000527013 SYDE2Q5VT97 1194 aa18.99■□□□□ 0.63
CHEK1-209ENST00000527013 TTBK2Q6IQ55 1244 aa18.99■□□□□ 0.63
CHEK1-209ENST00000527013 RPUSD2Q8IZ73 545 aaKnown RBP18.99■□□□□ 0.63
CHEK1-209ENST00000527013 VWCEQ96DN2 955 aa18.99■□□□□ 0.63
CHEK1-209ENST00000527013 TMEM47Q9BQJ4 181 aa18.99■□□□□ 0.63
CHEK1-209ENST00000527013 ALDH8A1Q9H2A2 487 aaPredicted RBP18.99■□□□□ 0.63
CHEK1-209ENST00000527013 NFIBO00712 420 aa18.98■□□□□ 0.63
CHEK1-209ENST00000527013 CCL23P55773 120 aa18.98■□□□□ 0.63
CHEK1-209ENST00000527013 ATXN2LQ8WWM7 1075 aaKnown RBP18.98■□□□□ 0.63
CHEK1-209ENST00000527013 CLEC4DQ8WXI8 215 aa18.98■□□□□ 0.63
CHEK1-209ENST00000527013 WDR11Q9BZH6 1224 aa18.98■□□□□ 0.63
CHEK1-209ENST00000527013 POLR3EQ9NVU0 708 aa18.98■□□□□ 0.63
CHEK1-209ENST00000527013 GBF1Q92538 1859 aa18.98■□□□□ 0.63
CHEK1-209ENST00000527013 TTC28Q96AY4 2481 aa18.98■□□□□ 0.63
CHEK1-209ENST00000527013 CHD7Q9P2D1 2997 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 PFKMP08237 780 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 SUPT20HL2P0C7V6 817 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 PDHBP11177 359 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 PCP11498 1178 aaKnown RBP18.97■□□□□ 0.63
CHEK1-209ENST00000527013 PDE1AP54750 535 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 PURAQ00577 322 aaKnown RBP18.97■□□□□ 0.63
CHEK1-209ENST00000527013 ADGRE1Q14246 886 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 MCMDC2Q4G0Z9 681 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 OTOP2Q7RTS6 562 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 TTC14Q96N46 770 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 SLC28A3Q9HAS3 691 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 MTMR7Q9Y216 660 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 YBX2Q9Y2T7 364 aaKnown RBP18.97■□□□□ 0.63
CHEK1-209ENST00000527013 MUC3AQ02505 3323 aa18.97■□□□□ 0.63
CHEK1-209ENST00000527013 SNHG28P0DPA3 235 aa18.96■□□□□ 0.63
CHEK1-209ENST00000527013 HSPD1P10809 573 aaKnown RBP18.96■□□□□ 0.63
CHEK1-209ENST00000527013 EDNRBP24530 442 aa18.96■□□□□ 0.63
CHEK1-209ENST00000527013 CPT1AP50416 773 aa18.96■□□□□ 0.63
CHEK1-209ENST00000527013 ANKRD45Q5TZF3 282 aa18.96■□□□□ 0.63
CHEK1-209ENST00000527013 FAM227BQ96M60 508 aa18.96■□□□□ 0.63
CHEK1-209ENST00000527013 NKX2-4Q9H2Z4 354 aa18.96■□□□□ 0.63
CHEK1-209ENST00000527013 ZBTB47Q9UFB7 747 aaPredicted RBP18.96■□□□□ 0.63
CHEK1-209ENST00000527013 WDR19Q8NEZ3 1342 aa18.96■□□□□ 0.63
CHEK1-209ENST00000527013 MYO9BQ13459 2157 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 A0A0D9SFI3 127 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 PTPDC1A2A3K4 754 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 NKRFO15226 690 aaKnown RBP eCLIP18.95■□□□□ 0.62
CHEK1-209ENST00000527013 ZNF543Q08ER8 600 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 SLC30A10Q6XR72 485 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 DNERQ8NFT8 737 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 GPCPD1Q9NPB8 672 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 TOMM22Q9NS69 142 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 PCDHA11Q9Y5I1 949 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 SLC4A7Q9Y6M7 1214 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 SCN10AQ9Y5Y9 1956 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 TNKSO95271 1327 aa18.95■□□□□ 0.62
CHEK1-209ENST00000527013 FRMPD2Q68DX3 1309 aaPredicted RBP18.95■□□□□ 0.62
CHEK1-209ENST00000527013 HDAC1Q13547 482 aaPredicted RBP18.94■□□□□ 0.62
CHEK1-209ENST00000527013 RRP12Q5JTH9 1297 aaKnown RBP18.94■□□□□ 0.62
CHEK1-209ENST00000527013 RNF207Q6ZRF8 634 aa18.94■□□□□ 0.62
CHEK1-209ENST00000527013 SCLYQ96I15 445 aa18.94■□□□□ 0.62
CHEK1-209ENST00000527013 ASB2Q96Q27 587 aa18.94■□□□□ 0.62
CHEK1-209ENST00000527013 MTG1Q9BT17 334 aaPredicted RBP18.94■□□□□ 0.62
CHEK1-209ENST00000527013 MAF1Q9H063 256 aa18.94■□□□□ 0.62
CHEK1-209ENST00000527013 TRMT13Q9NUP7 481 aaKnown RBP18.94■□□□□ 0.62
CHEK1-209ENST00000527013 THEGQ9P2T0 379 aa18.94■□□□□ 0.62
CHEK1-209ENST00000527013 A6NJR5 290 aa18.93■□□□□ 0.62
CHEK1-209ENST00000527013 TNFRSF10AO00220 468 aa18.93■□□□□ 0.62
CHEK1-209ENST00000527013 KPNA6O60684 536 aa18.93■□□□□ 0.62
CHEK1-209ENST00000527013 RPS6P62753 249 aaKnown RBP18.93■□□□□ 0.62
CHEK1-209ENST00000527013 NFRKBQ6P4R8 1299 aa18.93■□□□□ 0.62
CHEK1-209ENST00000527013 RGS22Q8NE09 1264 aa18.93■□□□□ 0.62
CHEK1-209ENST00000527013 OR6J1Q8NGC5 347 aa18.93■□□□□ 0.62
CHEK1-209ENST00000527013 SCFD2Q8WU76 684 aa18.93■□□□□ 0.62
CHEK1-209ENST00000527013 MPHOSPH6Q99547 160 aaKnown RBP18.93■□□□□ 0.62
CHEK1-209ENST00000527013 PITPNM1O00562 1244 aa18.92■□□□□ 0.62
CHEK1-209ENST00000527013 CYP2C9P11712 490 aa18.92■□□□□ 0.62
CHEK1-209ENST00000527013 CALML3P27482 149 aa18.92■□□□□ 0.62
CHEK1-209ENST00000527013 NT5C2P49902 561 aa18.92■□□□□ 0.62
CHEK1-209ENST00000527013 PTPN11Q06124 597 aaPredicted RBP18.92■□□□□ 0.62
CHEK1-209ENST00000527013 PDE4DQ08499 809 aa18.92■□□□□ 0.62
CHEK1-209ENST00000527013 PPP2R5BQ15173 497 aa18.92■□□□□ 0.62
CHEK1-209ENST00000527013 BRDTQ58F21 947 aaPredicted RBP18.92■□□□□ 0.62
CHEK1-209ENST00000527013 GPATCH4Q5T3I0 446 aaKnown RBP18.92■□□□□ 0.62
CHEK1-209ENST00000527013 MFSD6Q6ZSS7 791 aa18.92■□□□□ 0.62
CHEK1-209ENST00000527013 ZNF589Q86UQ0 364 aaPredicted RBP18.92■□□□□ 0.62
CHEK1-209ENST00000527013 PPM1EQ8WY54 764 aa18.92■□□□□ 0.62
CHEK1-209ENST00000527013 GPHNQ9NQX3 736 aaPredicted RBP18.92■□□□□ 0.62
CHEK1-209ENST00000527013 RAD50Q92878 1312 aa18.92■□□□□ 0.62
CHEK1-209ENST00000527013 B4DLN1 442 aa18.91■□□□□ 0.62
CHEK1-209ENST00000527013 MYL3P08590 195 aa18.91■□□□□ 0.62
CHEK1-209ENST00000527013 ATP2A2P16615 1042 aaKnown RBP18.91■□□□□ 0.62
CHEK1-209ENST00000527013 IGFBP4P22692 258 aa18.91■□□□□ 0.62
CHEK1-209ENST00000527013 RFC2P35250 354 aa18.91■□□□□ 0.62
CHEK1-209ENST00000527013 MRPL12P52815 198 aaKnown RBP18.91■□□□□ 0.62
CHEK1-209ENST00000527013 RABGGTBP53611 331 aa18.91■□□□□ 0.62
CHEK1-209ENST00000527013 RRP1P56182 461 aaKnown RBP18.91■□□□□ 0.62
CHEK1-209ENST00000527013 MRPS5P82675 430 aaKnown RBP18.91■□□□□ 0.62
CHEK1-209ENST00000527013 NBPF20Q3BBV1 942 aa18.91■□□□□ 0.62
CHEK1-209ENST00000527013 CCDC171Q6TFL3 1326 aa18.91■□□□□ 0.62
CHEK1-209ENST00000527013 HAND2P61296 217 aa18.9■□□□□ 0.62
CHEK1-209ENST00000527013 NMIQ13287 307 aaPredicted RBP18.9■□□□□ 0.62
CHEK1-209ENST00000527013 TTLL4Q14679 1199 aa18.9■□□□□ 0.62
CHEK1-209ENST00000527013 PPP2R2DQ66LE6 453 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms