RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 TCP11L1Q9NUJ3 509 aa22.12■■□□□ 1.13
CAPN1-206ENST00000526966 ADD3Q9UEY8 706 aaKnown RBP22.12■■□□□ 1.13
CAPN1-206ENST00000526966 MSRAQ9UJ68 235 aa22.12■■□□□ 1.13
CAPN1-206ENST00000526966 SCN5AQ14524 2016 aa22.12■■□□□ 1.13
CAPN1-206ENST00000526966 ZMYM6O95789 1325 aa22.11■■□□□ 1.13
CAPN1-206ENST00000526966 RBM47A0AV96 593 aaKnown RBP22.11■■□□□ 1.13
CAPN1-206ENST00000526966 NFIBO00712 420 aa22.11■■□□□ 1.13
CAPN1-206ENST00000526966 TOP1P11387 765 aaKnown RBP22.11■■□□□ 1.13
CAPN1-206ENST00000526966 CCL23P55773 120 aa22.11■■□□□ 1.13
CAPN1-206ENST00000526966 VWCEQ96DN2 955 aa22.11■■□□□ 1.13
CAPN1-206ENST00000526966 TMEM47Q9BQJ4 181 aa22.11■■□□□ 1.13
CAPN1-206ENST00000526966 ALDH8A1Q9H2A2 487 aaPredicted RBP22.11■■□□□ 1.13
CAPN1-206ENST00000526966 TRANK1O15050 2925 aa22.11■■□□□ 1.13
CAPN1-206ENST00000526966 TANC1Q9C0D5 1861 aa22.11■■□□□ 1.13
CAPN1-206ENST00000526966 FGAP02671 866 aa22.1■■□□□ 1.13
CAPN1-206ENST00000526966 ADGRE1Q14246 886 aa22.1■■□□□ 1.13
CAPN1-206ENST00000526966 TICAM2Q86XR7 235 aa22.1■■□□□ 1.13
CAPN1-206ENST00000526966 PRDM6Q9NQX0 595 aa22.1■■□□□ 1.13
CAPN1-206ENST00000526966 REV3LO60673 3130 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 A0A0D9SFI3 127 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 PDHBP11177 359 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 PDE1AP54750 535 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 PURAQ00577 322 aaKnown RBP22.09■■□□□ 1.13
CAPN1-206ENST00000526966 SLC30A10Q6XR72 485 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 OTOP2Q7RTS6 562 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 CLEC4DQ8WXI8 215 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 FAM227BQ96M60 508 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 NKX2-4Q9H2Z4 354 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 TOMM22Q9NS69 142 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 POLR3EQ9NVU0 708 aa22.09■■□□□ 1.13
CAPN1-206ENST00000526966 YBX2Q9Y2T7 364 aaKnown RBP22.09■■□□□ 1.13
CAPN1-206ENST00000526966 FRMPD2Q68DX3 1309 aaPredicted RBP22.08■■□□□ 1.13
CAPN1-206ENST00000526966 LAMA4Q16363 1823 aa22.08■■□□□ 1.13
CAPN1-206ENST00000526966 ANKRD45Q5TZF3 282 aa22.08■■□□□ 1.13
CAPN1-206ENST00000526966 RPUSD2Q8IZ73 545 aaKnown RBP22.08■■□□□ 1.13
CAPN1-206ENST00000526966 WDR11Q9BZH6 1224 aa22.08■■□□□ 1.13
CAPN1-206ENST00000526966 PNMA2Q9UL42 364 aa22.08■■□□□ 1.13
CAPN1-206ENST00000526966 WDR19Q8NEZ3 1342 aa22.07■■□□□ 1.12
CAPN1-206ENST00000526966 PTPDC1A2A3K4 754 aa22.07■■□□□ 1.12
CAPN1-206ENST00000526966 SNHG28P0DPA3 235 aa22.07■■□□□ 1.12
CAPN1-206ENST00000526966 HSPD1P10809 573 aaKnown RBP22.07■■□□□ 1.12
CAPN1-206ENST00000526966 EDNRBP24530 442 aa22.07■■□□□ 1.12
CAPN1-206ENST00000526966 CPT1AP50416 773 aa22.07■■□□□ 1.12
CAPN1-206ENST00000526966 MCMDC2Q4G0Z9 681 aa22.07■■□□□ 1.12
CAPN1-206ENST00000526966 RRP12Q5JTH9 1297 aaKnown RBP22.07■■□□□ 1.12
CAPN1-206ENST00000526966 ATXN2LQ8WWM7 1075 aaKnown RBP22.07■■□□□ 1.12
CAPN1-206ENST00000526966 SLC28A3Q9HAS3 691 aa22.07■■□□□ 1.12
CAPN1-206ENST00000526966 GPCPD1Q9NPB8 672 aa22.07■■□□□ 1.12
CAPN1-206ENST00000526966 ZBTB47Q9UFB7 747 aaPredicted RBP22.07■■□□□ 1.12
CAPN1-206ENST00000526966 TNKSO95271 1327 aa22.06■■□□□ 1.12
CAPN1-206ENST00000526966 SUPT20HL2P0C7V6 817 aa22.06■■□□□ 1.12
CAPN1-206ENST00000526966 ZNF543Q08ER8 600 aa22.06■■□□□ 1.12
CAPN1-206ENST00000526966 ZNF589Q86UQ0 364 aaPredicted RBP22.06■■□□□ 1.12
CAPN1-206ENST00000526966 SCLYQ96I15 445 aa22.06■■□□□ 1.12
CAPN1-206ENST00000526966 TRMT13Q9NUP7 481 aaKnown RBP22.06■■□□□ 1.12
CAPN1-206ENST00000526966 THEGQ9P2T0 379 aa22.06■■□□□ 1.12
CAPN1-206ENST00000526966 BDP1A6H8Y1 2624 aa22.05■■□□□ 1.12
CAPN1-206ENST00000526966 PFKMP08237 780 aa22.05■■□□□ 1.12
CAPN1-206ENST00000526966 PCP11498 1178 aaKnown RBP22.05■■□□□ 1.12
CAPN1-206ENST00000526966 RRP1P56182 461 aaKnown RBP22.05■■□□□ 1.12
CAPN1-206ENST00000526966 RNF207Q6ZRF8 634 aa22.05■■□□□ 1.12
CAPN1-206ENST00000526966 TET1Q8NFU7 2136 aa22.05■■□□□ 1.12
CAPN1-206ENST00000526966 OR6J1Q8NGC5 347 aa22.05■■□□□ 1.12
CAPN1-206ENST00000526966 PPM1EQ8WY54 764 aa22.05■■□□□ 1.12
CAPN1-206ENST00000526966 TTC14Q96N46 770 aa22.05■■□□□ 1.12
CAPN1-206ENST00000526966 PCDHA11Q9Y5I1 949 aa22.05■■□□□ 1.12
CAPN1-206ENST00000526966 SLC4A7Q9Y6M7 1214 aa22.05■■□□□ 1.12
CAPN1-206ENST00000526966 MYH6P13533 1939 aa22.05■■□□□ 1.12
CAPN1-206ENST00000526966 KIAA1217Q5T5P2 1943 aa22.04■■□□□ 1.12
CAPN1-206ENST00000526966 NKRFO15226 690 aaKnown RBP eCLIP22.04■■□□□ 1.12
CAPN1-206ENST00000526966 CYP2C9P11712 490 aa22.04■■□□□ 1.12
CAPN1-206ENST00000526966 CALML3P27482 149 aa22.04■■□□□ 1.12
CAPN1-206ENST00000526966 RPS6P62753 249 aaKnown RBP22.04■■□□□ 1.12
CAPN1-206ENST00000526966 HDAC1Q13547 482 aaPredicted RBP22.04■■□□□ 1.12
CAPN1-206ENST00000526966 DNERQ8NFT8 737 aa22.04■■□□□ 1.12
CAPN1-206ENST00000526966 MTG1Q9BT17 334 aaPredicted RBP22.04■■□□□ 1.12
CAPN1-206ENST00000526966 CCDC171Q6TFL3 1326 aa22.04■■□□□ 1.12
CAPN1-206ENST00000526966 TRIP12Q14669 1992 aaPredicted RBP22.03■■□□□ 1.12
CAPN1-206ENST00000526966 MYL3P08590 195 aa22.03■■□□□ 1.12
CAPN1-206ENST00000526966 RABGGTBP53611 331 aa22.03■■□□□ 1.12
CAPN1-206ENST00000526966 HAND2P61296 217 aa22.03■■□□□ 1.12
CAPN1-206ENST00000526966 NMIQ13287 307 aaPredicted RBP22.03■■□□□ 1.12
CAPN1-206ENST00000526966 PPP2R5BQ15173 497 aa22.03■■□□□ 1.12
CAPN1-206ENST00000526966 TBC1D10CQ8IV04 446 aa22.03■■□□□ 1.12
CAPN1-206ENST00000526966 SCFD2Q8WU76 684 aa22.03■■□□□ 1.12
CAPN1-206ENST00000526966 ASB2Q96Q27 587 aa22.03■■□□□ 1.12
CAPN1-206ENST00000526966 PRRC2BQ5JSZ5 2229 aaKnown RBP22.03■■□□□ 1.12
CAPN1-206ENST00000526966 RAD50Q92878 1312 aa22.03■■□□□ 1.12
CAPN1-206ENST00000526966 A6NJR5 290 aa22.02■■□□□ 1.12
CAPN1-206ENST00000526966 TNFRSF10AO00220 468 aa22.02■■□□□ 1.12
CAPN1-206ENST00000526966 IGFBP4P22692 258 aa22.02■■□□□ 1.12
CAPN1-206ENST00000526966 PDE4DQ08499 809 aa22.02■■□□□ 1.12
CAPN1-206ENST00000526966 TTLL4Q14679 1199 aa22.02■■□□□ 1.12
CAPN1-206ENST00000526966 MFSD6Q6ZSS7 791 aa22.02■■□□□ 1.12
CAPN1-206ENST00000526966 MPHOSPH6Q99547 160 aaKnown RBP22.02■■□□□ 1.12
CAPN1-206ENST00000526966 GPHNQ9NQX3 736 aaPredicted RBP22.02■■□□□ 1.12
CAPN1-206ENST00000526966 ZBBXA8MT70 800 aa22.01■■□□□ 1.11
CAPN1-206ENST00000526966 ATP2A2P16615 1042 aaKnown RBP22.01■■□□□ 1.11
CAPN1-206ENST00000526966 NBPF20Q3BBV1 942 aa22.01■■□□□ 1.11
CAPN1-206ENST00000526966 BRDTQ58F21 947 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms