RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 BEX3Q00994 111 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 ITGA7Q13683 1181 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 DUSP28Q4G0W2 176 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 TTC22Q5TAA0 569 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 CWC27Q6UX04 472 aaKnown RBP13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 CXCL17Q6UXB2 119 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 RNF207Q6ZRF8 634 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 KIAA1211Q6ZU35 1233 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 TBC1D10CQ8IV04 446 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 RGS22Q8NE09 1264 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 DNERQ8NFT8 737 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 ANKS1AQ92625 1134 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 FAM161BQ96MY7 647 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 PDGFCQ9NRA1 345 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 WDR19Q8NEZ3 1342 aa13.02□□□□□ -0.33
AMBRA1-204ENST00000526545 RBM47A0AV96 593 aaKnown RBP13.01□□□□□ -0.33
AMBRA1-204ENST00000526545 IMMTQ16891 758 aaKnown RBP13.01□□□□□ -0.33
AMBRA1-204ENST00000526545 EEPD1Q7L9B9 569 aa13.01□□□□□ -0.33
AMBRA1-204ENST00000526545 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
AMBRA1-204ENST00000526545 CLEC4DQ8WXI8 215 aa13.01□□□□□ -0.33
AMBRA1-204ENST00000526545 DSCC1Q9BVC3 393 aa13.01□□□□□ -0.33
AMBRA1-204ENST00000526545 NEDD4P46934 1319 aa13□□□□□ -0.33
AMBRA1-204ENST00000526545 KDM4AO75164 1064 aa13□□□□□ -0.33
AMBRA1-204ENST00000526545 CPT1AP50416 773 aa13□□□□□ -0.33
AMBRA1-204ENST00000526545 PNMA1Q8ND90 353 aa13□□□□□ -0.33
AMBRA1-204ENST00000526545 PURBQ96QR8 312 aaKnown RBP13□□□□□ -0.33
AMBRA1-204ENST00000526545 CDX2Q99626 313 aaPredicted RBP13□□□□□ -0.33
AMBRA1-204ENST00000526545 BUD13Q9BRD0 619 aaKnown RBP eCLIP13□□□□□ -0.331e-12■■■□□ 15.9
AMBRA1-204ENST00000526545 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
AMBRA1-204ENST00000526545 WDR11Q9BZH6 1224 aa13□□□□□ -0.33
AMBRA1-204ENST00000526545 KRT23Q9C075 422 aa13□□□□□ -0.33
AMBRA1-204ENST00000526545 KAT14Q9H8E8 782 aa13□□□□□ -0.33
AMBRA1-204ENST00000526545 CNNM2Q9H8M5 875 aa13□□□□□ -0.33
AMBRA1-204ENST00000526545 POLR3EQ9NVU0 708 aa13□□□□□ -0.33
AMBRA1-204ENST00000526545 UNC80Q8N2C7 3258 aa12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 NKRFO15226 690 aaKnown RBP eCLIP12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 CSF2RAP15509 400 aa12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 CALML3P27482 149 aa12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 RPS6P62753 249 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 PDE4DQ08499 809 aa12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 ASPRV1Q53RT3 343 aa12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 BRDTQ58F21 947 aaPredicted RBP12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 TMEM240Q5SV17 173 aa12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 PSRC1Q6PGN9 363 aaPredicted RBP12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 C16orf59Q7L2K0 433 aa12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 ZSCAN10Q96SZ4 725 aaPredicted RBP12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 TTYH1Q9H313 450 aaPredicted RBP12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 HIPK3Q9H422 1215 aa12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 ZSWIM5Q9P217 1185 aa12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 DDX49Q9Y6V7 483 aaKnown RBP12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 MCM3APO60318 1980 aa12.99□□□□□ -0.33
AMBRA1-204ENST00000526545 GRIN2DO15399 1336 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 RAD50Q92878 1312 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 KPNA6O60684 536 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 SUPT20HL2P0C7V6 817 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 GOLGA8HP0CJ92 632 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 EDNRBP24530 442 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 RASIP1Q5U651 963 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 SLC30A10Q6XR72 485 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 SCFD2Q8WU76 684 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 RUFY2Q8WXA3 655 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 PPP1R12CQ9BZL4 782 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 MTIF3Q9H2K0 278 aaKnown RBP12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 IL23AQ9NPF7 189 aa12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 GPHNQ9NQX3 736 aaPredicted RBP12.98□□□□□ -0.33
AMBRA1-204ENST00000526545 LRRC37A2A6NM11 1700 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 ABCB11O95342 1321 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 B4E1Z4 1266 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 DNAJB2P25686 324 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 CYP2C18P33260 490 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 PPP2R5BQ15173 497 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 USH1GQ495M9 461 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 TMEM63BQ5T3F8 832 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 ZNF365Q70YC5 407 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 MCF2L2Q86YR7 1114 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 ADGRF4Q8IZF3 695 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 ENAHQ8N8S7 591 aaPredicted RBP12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 UBAC1Q9BSL1 405 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 UBA5Q9GZZ9 404 aa12.97□□□□□ -0.33
AMBRA1-204ENST00000526545 EYSQ5T1H1 3165 aa12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 TNKSO95271 1327 aa12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 A6NJR5 290 aa12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 B4GALT4O60513 344 aa12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 FGBP02675 491 aa12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 PARP1P09874 1014 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 GSPT1P15170 499 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 PSMC6P62333 389 aa12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 PURAQ00577 322 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 CDC37Q16543 378 aaPredicted RBP12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 RPUSD2Q8IZ73 545 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 OR6J1Q8NGC5 347 aa12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 MAFAQ8NHW3 353 aaPredicted RBP12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 HERVK_113Q902F9 699 aa12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 IWS1Q96ST2 819 aa12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 MTG1Q9BT17 334 aaPredicted RBP12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 NOC4LQ9BVI4 516 aaKnown RBP12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 TRPV6Q9H1D0 765 aa12.96□□□□□ -0.33
AMBRA1-204ENST00000526545 ALDH8A1Q9H2A2 487 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms