RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ZC3H12AQ5D1E8 599 aaKnown RBP10.99□□□□□ -0.65
USP35-201ENST00000526425 TRIM74Q86UV6 250 aa10.99□□□□□ -0.65
USP35-201ENST00000526425 TRIM73Q86UV7 250 aa10.99□□□□□ -0.65
USP35-201ENST00000526425 SPICE1Q8N0Z3 855 aa10.99□□□□□ -0.65
USP35-201ENST00000526425 IGSF22Q8N9C0 903 aa10.99□□□□□ -0.65
USP35-201ENST00000526425 MLKLQ8NB16 471 aa10.99□□□□□ -0.65
USP35-201ENST00000526425 TEKT1Q969V4 418 aa10.99□□□□□ -0.65
USP35-201ENST00000526425 TBC1D7Q9P0N9 293 aa10.99□□□□□ -0.65
USP35-201ENST00000526425 SCAF8Q9UPN6 1271 aaKnown RBP10.99□□□□□ -0.65
USP35-201ENST00000526425 C4BP0C0L5 1744 aa10.99□□□□□ -0.65
USP35-201ENST00000526425 C21orf2O43822 256 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 GDF11O95390 407 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 PCP11498 1178 aaKnown RBP10.98□□□□□ -0.65
USP35-201ENST00000526425 BAG1Q99933 345 aaPredicted RBP10.98□□□□□ -0.65
USP35-201ENST00000526425 EXOC1Q9NV70 894 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 TMEM260Q9NX78 707 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 GDAQ9Y2T3 454 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 ANKRD36CQ5JPF3 1778 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 PPP1R12BO60237 982 aaPredicted RBP10.98□□□□□ -0.65
USP35-201ENST00000526425 DNA2P51530 1060 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 NONOQ15233 471 aaKnown RBP eCLIP10.98□□□□□ -0.65
USP35-201ENST00000526425 PKN1Q16512 942 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 UBE2SQ16763 222 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 LARGE2Q8N3Y3 721 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 FERMT2Q96AC1 680 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 CALML4Q96GE6 196 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 PAGE5Q96GU1 130 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 ETAA1Q9NY74 926 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 TAF1P21675 1872 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 MYH3P11055 1940 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 A0A087WUV0 522 aaPredicted RBP10.98□□□□□ -0.65
USP35-201ENST00000526425 CCP110O43303 1012 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 ATP2C2O75185 946 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 ZBTB7AO95365 584 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 MYBL2P10244 700 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 INPP5BP32019 993 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 CORO7P57737 925 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 UBXN1Q04323 297 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 CUL4BQ13620 913 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 RBM43Q6ZSC3 357 aaKnown RBP10.98□□□□□ -0.65
USP35-201ENST00000526425 FCHSD1Q86WN1 690 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 EFCAB13Q8IY85 973 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 ARMC2Q8NEN0 867 aa10.98□□□□□ -0.65
USP35-201ENST00000526425 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
USP35-201ENST00000526425 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.97□□□□□ -0.65
USP35-201ENST00000526425 A0A1B0GUA9 196 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 CLRN2A0PK11 232 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 GNA11P29992 359 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 CDR1P51861 262 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 REXO1Q8N1G1 1221 aaKnown RBP10.97□□□□□ -0.65
USP35-201ENST00000526425 SUPT20HQ8NEM7 779 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 NELFBQ8WX92 580 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 SPDL1Q96EA4 605 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 PDS5AQ29RF7 1337 aaKnown RBP10.97□□□□□ -0.65
USP35-201ENST00000526425 PDE4DQ08499 809 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 TMEM266Q2M3C6 531 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 OGFOD1Q8N543 542 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 GJA10Q969M2 543 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 CNTNAP5Q8WYK1 1306 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 KIAA0754O94854 1291 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 PFKFB3Q16875 520 aaPredicted RBP10.97□□□□□ -0.65
USP35-201ENST00000526425 PODNQ7Z5L7 613 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 TTLL6Q8N841 843 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 PHF20Q9BVI0 1012 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 ZCWPW1Q9H0M4 648 aa10.97□□□□□ -0.65
USP35-201ENST00000526425 TMCO5BA8MYB1 307 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 AKR1B1P15121 316 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 SLC1A4P43007 532 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 IRX1P78414 480 aaPredicted RBP10.96□□□□□ -0.65
USP35-201ENST00000526425 ARMCX5Q6P1M9 558 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 CABP7Q86V35 215 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 TBCKQ8TEA7 893 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 EXOC4Q96A65 974 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 PCDHA4Q9UN74 947 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 SAMM50Q9Y512 469 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 TCP10L2B9ZVM9 353 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 KIF3CO14782 793 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 TEX33O43247 280 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 ZSCAN12O43309 604 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 N4BP1O75113 896 aaKnown RBP10.96□□□□□ -0.65
USP35-201ENST00000526425 SASH3O75995 380 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 KIF4BQ2VIQ3 1234 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 REXO1L1PQ8IX06 675 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 FBXL16Q8N461 479 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 MICAL1Q8TDZ2 1067 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 POLD4Q9HCU8 107 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 KCNQ5Q9NR82 932 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 IL17RBQ9NRM6 502 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 PKD2L1Q9P0L9 805 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 RPS6KL1Q9Y6S9 549 aa10.96□□□□□ -0.65
USP35-201ENST00000526425 TRIM49BA6NDI0 452 aa10.96□□□□□ -0.66
USP35-201ENST00000526425 EBAG9O00559 213 aa10.96□□□□□ -0.66
USP35-201ENST00000526425 ORC4O43929 436 aa10.96□□□□□ -0.66
USP35-201ENST00000526425 PYGLP06737 847 aa10.96□□□□□ -0.66
USP35-201ENST00000526425 RASA1P20936 1047 aa10.96□□□□□ -0.66
USP35-201ENST00000526425 EPS15P42566 896 aa10.96□□□□□ -0.66
USP35-201ENST00000526425 SWT1Q5T5J6 900 aaKnown RBP10.96□□□□□ -0.66
USP35-201ENST00000526425 TTBK2Q6IQ55 1244 aa10.96□□□□□ -0.66
USP35-201ENST00000526425 SUGP1Q8IWZ8 645 aaKnown RBP10.96□□□□□ -0.66
USP35-201ENST00000526425 GDAP1L1Q96MZ0 367 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms