RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SLC30A10Q6XR72 485 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 SAMD3Q8N6K7 520 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 NECAB1Q8N987 351 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 ZNF333Q96JL9 665 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 RNF26Q9BY78 433 aaPredicted RBP14.92□□□□□ -0.02
SMPD1-202ENST00000526280 MAP3K20Q9NYL2 800 aaKnown RBP14.92□□□□□ -0.02
SMPD1-202ENST00000526280 RBM27Q9P2N5 1060 aaKnown RBP14.92□□□□□ -0.02
SMPD1-202ENST00000526280 BIN2Q9UBW5 565 aaPredicted RBP14.92□□□□□ -0.02
SMPD1-202ENST00000526280 SOWAHBA6NEL2 793 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 CALML3P27482 149 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 HSD17B4P51659 736 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 UBXN2AP68543 259 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 AKAP17AQ02040 695 aaKnown RBP14.92□□□□□ -0.02
SMPD1-202ENST00000526280 TRIM32Q13049 653 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 PKN1Q16512 942 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 PFKFB3Q16875 520 aaPredicted RBP14.92□□□□□ -0.02
SMPD1-202ENST00000526280 MAP3K21Q5TCX8 1036 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 MFSD14CQ5VZR4 134 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 WWC2Q6AWC2 1192 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 MAMDC4Q6UXC1 1216 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 HEATR3Q7Z4Q2 680 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 MSL3Q8N5Y2 521 aaKnown RBP14.92□□□□□ -0.02
SMPD1-202ENST00000526280 GPKOWQ92917 476 aaPredicted RBP eCLIP14.92□□□□□ -0.02
SMPD1-202ENST00000526280 GTF3C6Q969F1 213 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 ZSCAN31Q96LW9 406 aaPredicted RBP14.92□□□□□ -0.02
SMPD1-202ENST00000526280 PURBQ96QR8 312 aaKnown RBP14.92□□□□□ -0.02
SMPD1-202ENST00000526280 TINF2Q9BSI4 451 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 SLC26A6Q9BXS9 759 aa14.92□□□□□ -0.02
SMPD1-202ENST00000526280 ASTN1O14525 1302 aa14.91□□□□□ -0.02
SMPD1-202ENST00000526280 hCG_1984214I3L0E3 225 aa14.91□□□□□ -0.02
SMPD1-202ENST00000526280 PPFIA3O75145 1194 aa14.91□□□□□ -0.02
SMPD1-202ENST00000526280 CDKL5O76039 1030 aa14.91□□□□□ -0.02
SMPD1-202ENST00000526280 CFBP00751 764 aa14.91□□□□□ -0.02
SMPD1-202ENST00000526280 SCG2P13521 617 aa14.91□□□□□ -0.02
SMPD1-202ENST00000526280 CYP2C19P33261 490 aa14.91□□□□□ -0.02
SMPD1-202ENST00000526280 CACNB2Q08289 660 aaPredicted RBP14.91□□□□□ -0.02
SMPD1-202ENST00000526280 SSRP1Q08945 709 aaKnown RBP14.91□□□□□ -0.02
SMPD1-202ENST00000526280 TRIM22Q8IYM9 498 aa14.91□□□□□ -0.02
SMPD1-202ENST00000526280 ZNF713Q8N859 430 aaPredicted RBP14.91□□□□□ -0.02
SMPD1-202ENST00000526280 SYTL5Q8TDW5 730 aaPredicted RBP14.91□□□□□ -0.02
SMPD1-202ENST00000526280 BARHL2Q9NY43 387 aa14.91□□□□□ -0.02
SMPD1-202ENST00000526280 LCTP09848 1927 aa14.9□□□□□ -0.02
SMPD1-202ENST00000526280 SYNGAP1Q96PV0 1343 aa14.9□□□□□ -0.02
SMPD1-202ENST00000526280 GCOM1H8Y6P7 765 aaPredicted RBP14.9□□□□□ -0.02
SMPD1-202ENST00000526280 STXBP3O00186 592 aa14.9□□□□□ -0.02
SMPD1-202ENST00000526280 CTDNEP1O95476 244 aa14.9□□□□□ -0.02
SMPD1-202ENST00000526280 POLR2MP0CAP2 368 aa14.9□□□□□ -0.02
SMPD1-202ENST00000526280 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
SMPD1-202ENST00000526280 MTFR1Q15390 333 aa14.9□□□□□ -0.02
SMPD1-202ENST00000526280 TYW1BQ6NUM6 668 aa14.9□□□□□ -0.02
SMPD1-202ENST00000526280 DNERQ8NFT8 737 aa14.9□□□□□ -0.02
SMPD1-202ENST00000526280 PSTPIP2Q9H939 334 aa14.9□□□□□ -0.02
SMPD1-202ENST00000526280 SH2B1Q9NRF2 756 aaPredicted RBP14.9□□□□□ -0.02
SMPD1-202ENST00000526280 COL20A1Q9P218 1284 aa14.9□□□□□ -0.02
SMPD1-202ENST00000526280 ADD3Q9UEY8 706 aaKnown RBP14.9□□□□□ -0.02
SMPD1-202ENST00000526280 LOC102724159A0A0B4J2E5 919 aa14.89□□□□□ -0.03
SMPD1-202ENST00000526280 ASB14A6NK59 587 aa14.89□□□□□ -0.03
SMPD1-202ENST00000526280 PIK3CDO00329 1044 aa14.89□□□□□ -0.03
SMPD1-202ENST00000526280 CD2BP2O95400 341 aaKnown RBP14.89□□□□□ -0.03
SMPD1-202ENST00000526280 SNAI1O95863 264 aaPredicted RBP14.89□□□□□ -0.03
SMPD1-202ENST00000526280 HOXA13P31271 388 aaPredicted RBP14.89□□□□□ -0.03
SMPD1-202ENST00000526280 MCM2P49736 904 aa14.89□□□□□ -0.03
SMPD1-202ENST00000526280 NAPAP54920 295 aa14.89□□□□□ -0.03
SMPD1-202ENST00000526280 ST3GAL1Q11201 340 aa14.89□□□□□ -0.03
SMPD1-202ENST00000526280 PWP2Q15269 919 aaKnown RBP14.89□□□□□ -0.03
SMPD1-202ENST00000526280 PPP1R18Q6NYC8 613 aa14.89□□□□□ -0.03
SMPD1-202ENST00000526280 MORC4Q8TE76 937 aa14.89□□□□□ -0.03
SMPD1-202ENST00000526280 TAAR1Q96RJ0 339 aa14.89□□□□□ -0.03
SMPD1-202ENST00000526280 RBBP6Q7Z6E9 1792 aaKnown RBP14.88□□□□□ -0.03
SMPD1-202ENST00000526280 RPTORQ8N122 1335 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 MEIS2O14770 477 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 DEXIO95424 95 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 MYCP01106 439 aaPredicted RBP14.88□□□□□ -0.03
SMPD1-202ENST00000526280 CYBAP13498 195 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 CCL5P13501 91 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 ALDH5A1P51649 535 aaPredicted RBP14.88□□□□□ -0.03
SMPD1-202ENST00000526280 PRAMEF19Q5SWL8 479 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 USP17L6PQ6QN14 398 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 ARMCX2Q7L311 632 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 TEX2Q8IWB9 1127 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 TRPV1Q8NER1 839 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 RMDN3Q96TC7 470 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 UNC93B1Q9H1C4 597 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 HMX1Q9NP08 348 aaPredicted RBP14.88□□□□□ -0.03
SMPD1-202ENST00000526280 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.88□□□□□ -0.03
SMPD1-202ENST00000526280 NRBP1Q9UHY1 535 aa14.88□□□□□ -0.03
SMPD1-202ENST00000526280 MCM3APO60318 1980 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 STK36Q9NRP7 1315 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 SMCO2A6NFE2 343 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 EDNRBP24530 442 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 CCND3P30281 292 aaPredicted RBP14.87□□□□□ -0.03
SMPD1-202ENST00000526280 MRPL12P52815 198 aaKnown RBP14.87□□□□□ -0.03
SMPD1-202ENST00000526280 SOX10P56693 466 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 CCDC83Q8IWF9 413 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 NSUN7Q8NE18 718 aaKnown RBP14.87□□□□□ -0.03
SMPD1-202ENST00000526280 NSUN6Q8TEA1 469 aaKnown RBP14.87□□□□□ -0.03
SMPD1-202ENST00000526280 CUL5Q93034 780 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 ZMYND12Q9H0C1 365 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 RNF208Q9H0X6 261 aa14.87□□□□□ -0.03
SMPD1-202ENST00000526280 RIC8AQ9NPQ8 531 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms