RNA–Protein interactions for RNA: ENST00000526193.5

RBBP4-217, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 4

Gene RBBP4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-217ENST00000526193 PNMA1Q8ND90 353 aa9.98□□□□□ -0.81
RBBP4-217ENST00000526193 RUFY2Q8WXA3 655 aa9.98□□□□□ -0.81
RBBP4-217ENST00000526193 MAP3K14Q99558 947 aa9.98□□□□□ -0.81
RBBP4-217ENST00000526193 SEMA6BQ9H3T3 888 aa9.98□□□□□ -0.81
RBBP4-217ENST00000526193 PRDM5Q9NQX1 630 aaPredicted RBP9.98□□□□□ -0.81
RBBP4-217ENST00000526193 TOMM22Q9NS69 142 aa9.98□□□□□ -0.81
RBBP4-217ENST00000526193 HOMER2Q9NSB8 354 aa9.98□□□□□ -0.81
RBBP4-217ENST00000526193 ZSWIM5Q9P217 1185 aa9.98□□□□□ -0.81
RBBP4-217ENST00000526193 ABCB11O95342 1321 aa9.98□□□□□ -0.81
RBBP4-217ENST00000526193 LTBP2Q14767 1821 aa9.98□□□□□ -0.81
RBBP4-217ENST00000526193 TTC28Q96AY4 2481 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 NFIBO00712 420 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 SMARCA1P28370 1054 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 ITGA7Q13683 1181 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 C9orf50Q5SZB4 431 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 NFRKBQ6P4R8 1299 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 NSMFQ6X4W1 530 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 SESTD1Q86VW0 696 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 ENAHQ8N8S7 591 aaPredicted RBP9.97□□□□□ -0.81
RBBP4-217ENST00000526193 SLC17A8Q8NDX2 589 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 EXOC6Q8TAG9 804 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 NSUN6Q8TEA1 469 aaKnown RBP9.97□□□□□ -0.81
RBBP4-217ENST00000526193 EMID1Q96A84 441 aaPredicted RBP9.97□□□□□ -0.81
RBBP4-217ENST00000526193 GUCD1Q96NT3 240 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 MRPL11Q9Y3B7 192 aaKnown RBP9.97□□□□□ -0.81
RBBP4-217ENST00000526193 U3KPZ7 1027 aaPredicted RBP9.97□□□□□ -0.81
RBBP4-217ENST00000526193 GRIN2DO15399 1336 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 NEDD4P46934 1319 aa9.97□□□□□ -0.81
RBBP4-217ENST00000526193 PITPNM1O00562 1244 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 DYNC1LI2O43237 492 aaPredicted RBP9.96□□□□□ -0.82
RBBP4-217ENST00000526193 KDM4AO75164 1064 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 PARNO95453 639 aaKnown RBP9.96□□□□□ -0.82
RBBP4-217ENST00000526193 MYCNP04198 464 aaPredicted RBP9.96□□□□□ -0.82
RBBP4-217ENST00000526193 SLC16A2P36021 539 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 HAND2P61296 217 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 PURAQ00577 322 aaKnown RBP9.96□□□□□ -0.82
RBBP4-217ENST00000526193 SEC23AQ15436 765 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 RRP12Q5JTH9 1297 aaKnown RBP9.96□□□□□ -0.82
RBBP4-217ENST00000526193 TTC22Q5TAA0 569 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 B4GALNT3Q6L9W6 998 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 CCDC62Q6P9F0 684 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 KCNV1Q6PIU1 500 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 KIAA1211Q6ZU35 1233 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 RPUSD2Q8IZ73 545 aaKnown RBP9.96□□□□□ -0.82
RBBP4-217ENST00000526193 HERVK_113Q902F9 699 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 LENG1Q96BZ8 264 aaPredicted RBP9.96□□□□□ -0.82
RBBP4-217ENST00000526193 RNPC3Q96LT9 517 aaKnown RBP9.96□□□□□ -0.82
RBBP4-217ENST00000526193 UBAC1Q9BSL1 405 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 WDR11Q9BZH6 1224 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 MTIF3Q9H2K0 278 aaKnown RBP9.96□□□□□ -0.82
RBBP4-217ENST00000526193 KAT14Q9H8E8 782 aa9.96□□□□□ -0.82
RBBP4-217ENST00000526193 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.95□□□□□ -0.82
RBBP4-217ENST00000526193 PALM3A6NDB9 673 aaPredicted RBP9.95□□□□□ -0.82
RBBP4-217ENST00000526193 DLL1O00548 723 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 EIF3JO75822 258 aaKnown RBP9.95□□□□□ -0.82
RBBP4-217ENST00000526193 PARP1P09874 1014 aaKnown RBP9.95□□□□□ -0.82
RBBP4-217ENST00000526193 TGFB3P10600 412 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 HOXD8P13378 290 aaPredicted RBP9.95□□□□□ -0.82
RBBP4-217ENST00000526193 RFC2P35250 354 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 SLC4A3P48751 1232 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 EPHB4P54760 987 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 PDE4DQ08499 809 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 RBL2Q08999 1139 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 TRDNQ13061 729 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 TTLL4Q14679 1199 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 PPP2R5BQ15173 497 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 TMEM240Q5SV17 173 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 CXCL17Q6UXB2 119 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 STOX1Q6ZVD7 989 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 C16orf59Q7L2K0 433 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 MTG1Q9BT17 334 aaPredicted RBP9.95□□□□□ -0.82
RBBP4-217ENST00000526193 NOC4LQ9BVI4 516 aaKnown RBP9.95□□□□□ -0.82
RBBP4-217ENST00000526193 ALDH8A1Q9H2A2 487 aaPredicted RBP9.95□□□□□ -0.82
RBBP4-217ENST00000526193 GPCPD1Q9NPB8 672 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 IL23AQ9NPF7 189 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 PDGFCQ9NRA1 345 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 ISY1Q9ULR0 285 aaKnown RBP9.95□□□□□ -0.82
RBBP4-217ENST00000526193 TNKSO95271 1327 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 VCANP13611 3396 aa9.95□□□□□ -0.82
RBBP4-217ENST00000526193 PTPDC1A2A3K4 754 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 B4E1Z4 1266 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 SGSM2O43147 1006 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 CHMLP26374 656 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 HSD17B4P51659 736 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 CDC37Q16543 378 aaPredicted RBP9.94□□□□□ -0.82
RBBP4-217ENST00000526193 IFIT1BQ5T764 474 aaKnown RBP9.94□□□□□ -0.82
RBBP4-217ENST00000526193 NOL8Q76FK4 1167 aaKnown RBP9.94□□□□□ -0.82
RBBP4-217ENST00000526193 Q7L0L9 218 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 FBXO11Q86XK2 927 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 FBXO16Q8IX29 292 aaPredicted RBP9.94□□□□□ -0.82
RBBP4-217ENST00000526193 ADGRF4Q8IZF3 695 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 TMTC2Q8N394 836 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 SYTL5Q8TDW5 730 aaPredicted RBP9.94□□□□□ -0.82
RBBP4-217ENST00000526193 MAP4K1Q92918 833 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 VTI1AQ96AJ9 217 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 CDX2Q99626 313 aaPredicted RBP9.94□□□□□ -0.82
RBBP4-217ENST00000526193 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.94□□□□□ -0.821e-6■□□□□ 10.6
RBBP4-217ENST00000526193 AMNQ9BXJ7 453 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 HIPK3Q9H422 1215 aa9.94□□□□□ -0.82
RBBP4-217ENST00000526193 RIOX1Q9H6W3 641 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms