RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 RPS6P62753 249 aaKnown RBP19.98■□□□□ 0.79
LMX1B-203ENST00000526117 CNTN2Q02246 1040 aa19.98■□□□□ 0.79
LMX1B-203ENST00000526117 ANKRD1Q15327 319 aa19.98■□□□□ 0.79
LMX1B-203ENST00000526117 HOMER1Q86YM7 354 aa19.98■□□□□ 0.79
LMX1B-203ENST00000526117 CCDC144CPQ8IYA2 1237 aa19.98■□□□□ 0.79
LMX1B-203ENST00000526117 ASTN1O14525 1302 aa19.98■□□□□ 0.79
LMX1B-203ENST00000526117 LRRC37A2A6NM11 1700 aa19.97■□□□□ 0.79
LMX1B-203ENST00000526117 PTPDC1A2A3K4 754 aa19.97■□□□□ 0.79
LMX1B-203ENST00000526117 hCG_1984214I3L0E3 225 aa19.97■□□□□ 0.79
LMX1B-203ENST00000526117 SEPT4O43236 478 aa19.97■□□□□ 0.79
LMX1B-203ENST00000526117 CDC27P30260 824 aa19.97■□□□□ 0.79
LMX1B-203ENST00000526117 SOX10P56693 466 aa19.97■□□□□ 0.79
LMX1B-203ENST00000526117 SLC30A10Q6XR72 485 aa19.97■□□□□ 0.79
LMX1B-203ENST00000526117 ZNF713Q8N859 430 aaPredicted RBP19.97■□□□□ 0.79
LMX1B-203ENST00000526117 TRPV1Q8NER1 839 aa19.97■□□□□ 0.79
LMX1B-203ENST00000526117 U2AF1L4Q8WU68 220 aaKnown RBP19.97■□□□□ 0.79
LMX1B-203ENST00000526117 ABHD16BQ9H3Z7 469 aa19.97■□□□□ 0.79
LMX1B-203ENST00000526117 RBM27Q9P2N5 1060 aaKnown RBP19.97■□□□□ 0.79
LMX1B-203ENST00000526117 SNAI1O95863 264 aaPredicted RBP19.96■□□□□ 0.79
LMX1B-203ENST00000526117 ZNF865P0CJ78 1059 aaPredicted RBP19.96■□□□□ 0.79
LMX1B-203ENST00000526117 EDNRBP24530 442 aa19.96■□□□□ 0.79
LMX1B-203ENST00000526117 CCND3P30281 292 aaPredicted RBP19.96■□□□□ 0.79
LMX1B-203ENST00000526117 LHX8Q68G74 356 aa19.96■□□□□ 0.79
LMX1B-203ENST00000526117 ARMCX2Q7L311 632 aa19.96■□□□□ 0.79
LMX1B-203ENST00000526117 RAB11FIP4Q86YS3 637 aa19.96■□□□□ 0.79
LMX1B-203ENST00000526117 ANKLE1Q8NAG6 615 aa19.96■□□□□ 0.79
LMX1B-203ENST00000526117 SHISA4Q96DD7 197 aa19.96■□□□□ 0.79
LMX1B-203ENST00000526117 OGDHLQ9ULD0 1010 aa19.96■□□□□ 0.79
LMX1B-203ENST00000526117 CNPY2Q9Y2B0 182 aa19.96■□□□□ 0.79
LMX1B-203ENST00000526117 FRMPD3Q5JV73 1810 aa19.95■□□□□ 0.78
LMX1B-203ENST00000526117 ALDH5A1P51649 535 aaPredicted RBP19.95■□□□□ 0.78
LMX1B-203ENST00000526117 NTRK3Q16288 839 aa19.95■□□□□ 0.78
LMX1B-203ENST00000526117 CMTR1Q8N1G2 835 aaKnown RBP19.95■□□□□ 0.78
LMX1B-203ENST00000526117 DEFB118Q96PH6 123 aa19.95■□□□□ 0.78
LMX1B-203ENST00000526117 MPHOSPH6Q99547 160 aaKnown RBP19.95■□□□□ 0.78
LMX1B-203ENST00000526117 KATNBL1Q9H079 304 aa19.95■□□□□ 0.78
LMX1B-203ENST00000526117 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.95■□□□□ 0.78
LMX1B-203ENST00000526117 DDX20Q9UHI6 824 aaKnown RBP19.95■□□□□ 0.78
LMX1B-203ENST00000526117 B4DLN1 442 aa19.94■□□□□ 0.78
LMX1B-203ENST00000526117 PIK3CDO00329 1044 aa19.94■□□□□ 0.78
LMX1B-203ENST00000526117 MYCP01106 439 aaPredicted RBP19.94■□□□□ 0.78
LMX1B-203ENST00000526117 IFNAR1P17181 557 aa19.94■□□□□ 0.78
LMX1B-203ENST00000526117 ADD1P35611 737 aaKnown RBP19.94■□□□□ 0.78
LMX1B-203ENST00000526117 MRPL12P52815 198 aaKnown RBP19.94■□□□□ 0.78
LMX1B-203ENST00000526117 PPP1R18Q6NYC8 613 aa19.94■□□□□ 0.78
LMX1B-203ENST00000526117 UBE2Q1Q7Z7E8 422 aa19.94■□□□□ 0.78
LMX1B-203ENST00000526117 SYTL5Q8TDW5 730 aaPredicted RBP19.94■□□□□ 0.78
LMX1B-203ENST00000526117 C22orf23Q9BZE7 217 aa19.94■□□□□ 0.78
LMX1B-203ENST00000526117 UPF2Q9HAU5 1272 aaKnown RBP19.94■□□□□ 0.78
LMX1B-203ENST00000526117 BAZ2BQ9UIF8 2168 aaKnown RBP19.93■□□□□ 0.78
LMX1B-203ENST00000526117 EN2P19622 333 aaPredicted RBP19.93■□□□□ 0.78
LMX1B-203ENST00000526117 CALML3P27482 149 aa19.93■□□□□ 0.78
LMX1B-203ENST00000526117 ACVR2BQ13705 512 aa19.93■□□□□ 0.78
LMX1B-203ENST00000526117 IWS1Q96ST2 819 aa19.93■□□□□ 0.78
LMX1B-203ENST00000526117 KIF2CQ99661 725 aa19.93■□□□□ 0.78
LMX1B-203ENST00000526117 AKR1A1P14550 325 aa19.92■□□□□ 0.78
LMX1B-203ENST00000526117 NSUN6Q8TEA1 469 aaKnown RBP19.92■□□□□ 0.78
LMX1B-203ENST00000526117 TBC1D5Q92609 795 aa19.92■□□□□ 0.78
LMX1B-203ENST00000526117 RNF26Q9BY78 433 aaPredicted RBP19.92■□□□□ 0.78
LMX1B-203ENST00000526117 VTA1Q9NP79 307 aa19.92■□□□□ 0.78
LMX1B-203ENST00000526117 COL20A1Q9P218 1284 aa19.92■□□□□ 0.78
LMX1B-203ENST00000526117 NAP1L2Q9ULW6 460 aaPredicted RBP19.92■□□□□ 0.78
LMX1B-203ENST00000526117 FRMPD4Q14CM0 1322 aa19.92■□□□□ 0.78
LMX1B-203ENST00000526117 KIAA0100Q14667 2235 aaKnown RBP19.92■□□□□ 0.78
LMX1B-203ENST00000526117 GCOM1H8Y6P7 765 aaPredicted RBP19.91■□□□□ 0.78
LMX1B-203ENST00000526117 PRPF3O43395 683 aaKnown RBP19.91■□□□□ 0.78
LMX1B-203ENST00000526117 CFBP00751 764 aa19.91■□□□□ 0.78
LMX1B-203ENST00000526117 POLR2MP0CAP2 368 aa19.91■□□□□ 0.78
LMX1B-203ENST00000526117 NEK4P51957 841 aa19.91■□□□□ 0.78
LMX1B-203ENST00000526117 AK2P54819 239 aa19.91■□□□□ 0.78
LMX1B-203ENST00000526117 PFKFB3Q16875 520 aaPredicted RBP19.91■□□□□ 0.78
LMX1B-203ENST00000526117 PRAMEF19Q5SWL8 479 aa19.91■□□□□ 0.78
LMX1B-203ENST00000526117 CCDC82Q8N4S0 544 aa19.91■□□□□ 0.78
LMX1B-203ENST00000526117 PURBQ96QR8 312 aaKnown RBP19.91■□□□□ 0.78
LMX1B-203ENST00000526117 BARHL2Q9NY43 387 aa19.91■□□□□ 0.78
LMX1B-203ENST00000526117 FAM184BQ9ULE4 1060 aa19.91■□□□□ 0.78
LMX1B-203ENST00000526117 MKI67P46013 3256 aaKnown RBP19.91■□□□□ 0.78
LMX1B-203ENST00000526117 PFKFB2O60825 505 aa19.9■□□□□ 0.78
LMX1B-203ENST00000526117 MLLT1Q03111 559 aaPredicted RBP19.9■□□□□ 0.78
LMX1B-203ENST00000526117 FAM177A1Q8N128 213 aaPredicted RBP19.9■□□□□ 0.78
LMX1B-203ENST00000526117 RMDN3Q96TC7 470 aa19.9■□□□□ 0.78
LMX1B-203ENST00000526117 TPCN1Q9ULQ1 816 aa19.9■□□□□ 0.78
LMX1B-203ENST00000526117 V9GY48 417 aaPredicted RBP19.9■□□□□ 0.78
LMX1B-203ENST00000526117 RBM47A0AV96 593 aaKnown RBP19.89■□□□□ 0.77
LMX1B-203ENST00000526117 MEIS2O14770 477 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 MCM3APO60318 1980 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 TFRCP02786 760 aaKnown RBP19.89■□□□□ 0.77
LMX1B-203ENST00000526117 CNGA1P29973 690 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 NKX3-2P78367 333 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 WWC2Q6AWC2 1192 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 PIBF1Q8WXW3 757 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 TBC1D32Q96NH3 1257 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 TAAR1Q96RJ0 339 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 BACH2Q9BYV9 841 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 GLT8D2Q9H1C3 349 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 PXMP2Q9NR77 195 aa19.89■□□□□ 0.77
LMX1B-203ENST00000526117 TNRC18O15417 2968 aaPredicted RBP19.89■□□□□ 0.77
LMX1B-203ENST00000526117 ESYT2A0FGR8 921 aa19.88■□□□□ 0.77
LMX1B-203ENST00000526117 STXBP3O00186 592 aa19.88■□□□□ 0.77
LMX1B-203ENST00000526117 DUSP11O75319 330 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms