RNA–Protein interactions for RNA: ENST00000525874.1

SYVN1-205, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-205ENST00000525874 ICAM1P05362 532 aa13.1□□□□□ -0.31
SYVN1-205ENST00000525874 ATP2A2P16615 1042 aaKnown RBP13.1□□□□□ -0.31
SYVN1-205ENST00000525874 FSD1Q9BTV5 496 aa13.1□□□□□ -0.31
SYVN1-205ENST00000525874 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
SYVN1-205ENST00000525874 INCENPQ9NQS7 918 aa13.1□□□□□ -0.31
SYVN1-205ENST00000525874 TRMT13Q9NUP7 481 aaKnown RBP13.1□□□□□ -0.31
SYVN1-205ENST00000525874 RAPGEFL1Q9UHV5 662 aa13.1□□□□□ -0.31
SYVN1-205ENST00000525874 PRRC2BQ5JSZ5 2229 aaKnown RBP13.1□□□□□ -0.31
SYVN1-205ENST00000525874 TTC41PQ6P2S7 1318 aa13.1□□□□□ -0.31
SYVN1-205ENST00000525874 SCN5AQ14524 2016 aa13.1□□□□□ -0.31
SYVN1-205ENST00000525874 BDP1A6H8Y1 2624 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 ERC2O15083 957 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 PFKMP08237 780 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 SUPT20HL2P0C7V6 817 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 CYP2C9P11712 490 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 PURAQ00577 322 aaKnown RBP13.09□□□□□ -0.31
SYVN1-205ENST00000525874 CTDSPL2Q05D32 466 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 BAATQ14032 418 aaPredicted RBP13.09□□□□□ -0.31
SYVN1-205ENST00000525874 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 CCDC96Q2M329 555 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 MICALL1Q8N3F8 863 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 WDR11Q9BZH6 1224 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 RANBP17Q9H2T7 1088 aaKnown RBP13.09□□□□□ -0.31
SYVN1-205ENST00000525874 POLR3EQ9NVU0 708 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 ADD3Q9UEY8 706 aaKnown RBP13.09□□□□□ -0.31
SYVN1-205ENST00000525874 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 TNKSO95271 1327 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 SCN10AQ9Y5Y9 1956 aa13.09□□□□□ -0.31
SYVN1-205ENST00000525874 REV3LO60673 3130 aa13.08□□□□□ -0.32
SYVN1-205ENST00000525874 FOXP2O15409 715 aa13.08□□□□□ -0.32
SYVN1-205ENST00000525874 MYL3P08590 195 aa13.08□□□□□ -0.32
SYVN1-205ENST00000525874 NOVP48745 357 aa13.08□□□□□ -0.32
SYVN1-205ENST00000525874 ALDH5A1P51649 535 aaPredicted RBP13.08□□□□□ -0.32
SYVN1-205ENST00000525874 DEFB128Q7Z7B8 93 aa13.08□□□□□ -0.32
SYVN1-205ENST00000525874 DCAF4Q8WV16 495 aa13.08□□□□□ -0.32
SYVN1-205ENST00000525874 LOC102724159A0A0B4J2E5 919 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 RBM47A0AV96 593 aaKnown RBP13.07□□□□□ -0.32
SYVN1-205ENST00000525874 PTPDC1A2A3K4 754 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 NFIBO00712 420 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 RANBP6O60518 1105 aaKnown RBP13.07□□□□□ -0.32
SYVN1-205ENST00000525874 CA3P07451 260 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 BMP1P13497 986 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 SLC16A2P36021 539 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 CPT1AP50416 773 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 TFF2Q03403 129 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 PWP2Q15269 919 aaKnown RBP13.07□□□□□ -0.32
SYVN1-205ENST00000525874 TMEM67Q5HYA8 995 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 TTBK2Q6IQ55 1244 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 BTNL9Q6UXG8 535 aa13.07□□□□□ -0.32
SYVN1-205ENST00000525874 OTUD7AQ8TE49 926 aaPredicted RBP13.07□□□□□ -0.32
SYVN1-205ENST00000525874 NECAB3Q96P71 396 aaPredicted RBP13.07□□□□□ -0.32
SYVN1-205ENST00000525874 MTG1Q9BT17 334 aaPredicted RBP13.07□□□□□ -0.32
SYVN1-205ENST00000525874 SUPT16HQ9Y5B9 1047 aaKnown RBP13.07□□□□□ -0.32
SYVN1-205ENST00000525874 RFXAPO00287 272 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 ORC4O43929 436 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 ACTN1P12814 892 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 AAK1Q2M2I8 961 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 NBPF20Q3BBV1 942 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 SYDE2Q5VT97 1194 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 SLC30A10Q6XR72 485 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 OR6J1Q8NGC5 347 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 GPHNQ9NQX3 736 aaPredicted RBP13.06□□□□□ -0.32
SYVN1-205ENST00000525874 ANAPC4Q9UJX5 808 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 XIRP2A4UGR9 3374 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 TET1Q8NFU7 2136 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 TRANK1O15050 2925 aa13.06□□□□□ -0.32
SYVN1-205ENST00000525874 GTPBP6O43824 516 aaPredicted RBP13.05□□□□□ -0.32
SYVN1-205ENST00000525874 FGRP09769 529 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 POU3F3P20264 500 aaPredicted RBP13.05□□□□□ -0.32
SYVN1-205ENST00000525874 CALML3P27482 149 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 RFC2P35250 354 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 KCNQ1P51787 676 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 SKIV2LQ15477 1246 aaKnown RBP13.05□□□□□ -0.32
SYVN1-205ENST00000525874 BRDTQ58F21 947 aaPredicted RBP13.05□□□□□ -0.32
SYVN1-205ENST00000525874 FAM47CQ5HY64 1035 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 VPS53Q5VIR6 699 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 CLEC4DQ8WXI8 215 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 SLC9A7Q96T83 725 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 CERS4Q9HA82 394 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 MTCH2Q9Y6C9 303 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 TANC1Q9C0D5 1861 aa13.05□□□□□ -0.32
SYVN1-205ENST00000525874 TRIP12Q14669 1992 aaPredicted RBP13.05□□□□□ -0.32
SYVN1-205ENST00000525874 EPOPA6NHQ4 379 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 NKRFO15226 690 aaKnown RBP eCLIP13.04□□□□□ -0.32
SYVN1-205ENST00000525874 IQCF3P0C7M6 154 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
SYVN1-205ENST00000525874 MX1P20591 662 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 PDE4DQ08499 809 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 PPP2R5BQ15173 497 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 NFRKBQ6P4R8 1299 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 RNF207Q6ZRF8 634 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 RETREG2Q8NC44 543 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 PHOSPHO2Q8TCD6 241 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 SCFD2Q8WU76 684 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 PPP1R13LQ8WUF5 828 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 TMEM47Q9BQJ4 181 aa13.04□□□□□ -0.32
SYVN1-205ENST00000525874 TOMM22Q9NS69 142 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms