RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 KDM3AQ9Y4C1 1321 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 ACTN4O43707 911 aaKnown RBP9.14□□□□□ -0.95
CHD7-203ENST00000525508 CXCR5P32302 372 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 PSMC4P43686 418 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 RBM6P78332 1123 aaKnown RBP9.14□□□□□ -0.95
CHD7-203ENST00000525508 CYP27A1Q02318 531 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 RASSF7Q02833 373 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 EP400NLQ6ZTU2 488 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 KIAA1524Q8TCG1 905 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 MGARPQ8TDB4 240 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 ZNF668Q96K58 619 aaPredicted RBP9.14□□□□□ -0.95
CHD7-203ENST00000525508 BCL2L12Q9HB09 334 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 NEDD4P46934 1319 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 MARK3P27448 753 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 LONP1P36776 959 aaKnown RBP9.14□□□□□ -0.95
CHD7-203ENST00000525508 COPB1P53618 953 aaKnown RBP9.14□□□□□ -0.95
CHD7-203ENST00000525508 AOC3Q16853 763 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 LONRF2Q1L5Z9 754 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 TTLL6Q8N841 843 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 OXER1Q8TDS5 423 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 PIGOQ8TEQ8 1089 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 ZNF341Q9BYN7 854 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 POLR3EQ9NVU0 708 aa9.14□□□□□ -0.95
CHD7-203ENST00000525508 EPN1Q9Y6I3 576 aaPredicted RBP9.14□□□□□ -0.95
CHD7-203ENST00000525508 USP17L5A8MUK1 530 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 STAT2P52630 851 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 ETF1P62495 437 aaKnown RBP9.13□□□□□ -0.95
CHD7-203ENST00000525508 KCTD2Q14681 263 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 CFAP221Q4G0U5 840 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 KAZNQ674X7 775 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 CLEC10AQ8IUN9 316 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 SLFN12Q8IYM2 578 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 ZNF277Q9NRM2 450 aaPredicted RBP9.13□□□□□ -0.95
CHD7-203ENST00000525508 NARFQ9UHQ1 456 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 A2ML1A8K2U0 1454 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 NDUFAB1O14561 156 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 PLCG1P19174 1290 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 GTF2A1P52655 376 aaPredicted RBP9.13□□□□□ -0.95
CHD7-203ENST00000525508 CTTNQ14247 550 aaKnown RBP9.13□□□□□ -0.95
CHD7-203ENST00000525508 SEPT2Q15019 361 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 EXOC3L4Q17RC7 722 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 ASPRV1Q53RT3 343 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 GBP6Q6ZN66 633 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 GPATCH11Q8N954 259 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 CEP170P1Q96L14 293 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 GDAQ9Y2T3 454 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 CDK12Q9NYV4 1490 aaPredicted RBP9.13□□□□□ -0.95
CHD7-203ENST00000525508 POTEMA6NI47 508 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 M0QZ92 97 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 TMEM191BP0C7N4 346 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 ATP2A2P16615 1042 aaKnown RBP9.13□□□□□ -0.95
CHD7-203ENST00000525508 CHRNA5P30532 468 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 MRPS25P82663 173 aaKnown RBP9.13□□□□□ -0.95
CHD7-203ENST00000525508 RESTQ13127 1097 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 KRT71Q3SY84 523 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 MTERF2Q49AM1 385 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 NBPF11Q86T75 865 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 CDAN1Q8IWY9 1227 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 ARFGAP2Q8N6H7 521 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 CEP63Q96MT8 703 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 BHMT2Q9H2M3 363 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 ABCC3O15438 1527 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 MAP3K4Q9Y6R4 1608 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 HSPA1LP34931 641 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 EN1Q05925 392 aaPredicted RBP9.13□□□□□ -0.95
CHD7-203ENST00000525508 DMTNQ08495 405 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 CDC37Q16543 378 aaPredicted RBP9.13□□□□□ -0.95
CHD7-203ENST00000525508 ZNF772Q68DY9 489 aaPredicted RBP9.13□□□□□ -0.95
CHD7-203ENST00000525508 CCDC121Q6ZUS5 278 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 CTAGE3PQ8IX95 158 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 NKIRAS1Q9NYS0 192 aa9.13□□□□□ -0.95
CHD7-203ENST00000525508 A0A1W2PQ27 194 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 A0A1W2PQ64 194 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 A0A1W2PQD8 194 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 PSDA5PKW4 1024 aaPredicted RBP9.12□□□□□ -0.95
CHD7-203ENST00000525508 GOLGA8IPA6NC78 632 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 GOLGA6BA6NDN3 693 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 GOLGA8JA6NMD2 632 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 BUB1BO60566 1050 aaPredicted RBP9.12□□□□□ -0.95
CHD7-203ENST00000525508 DMP1Q13316 513 aaPredicted RBP9.12□□□□□ -0.95
CHD7-203ENST00000525508 NFIXQ14938 502 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 CCDC93Q567U6 631 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 ZBTB8OSQ8IWT0 167 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 NAP1L3Q99457 506 aaPredicted RBP9.12□□□□□ -0.95
CHD7-203ENST00000525508 TMEM47Q9BQJ4 181 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 NSRP1Q9H0G5 558 aaKnown RBP9.12□□□□□ -0.95
CHD7-203ENST00000525508 C1orf112Q9NSG2 853 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 SYNMO15061 1565 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 GOLGA6CA6NDK9 693 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 SLFN14P0C7P3 912 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 GOLGA6DP0CG33 693 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 KRT15P19012 456 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 CDC27P30260 824 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 LIFRP42702 1097 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 MESDQ14696 234 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 CLEC4GQ6UXB4 293 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 MCF2L2Q86YR7 1114 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 GPR161Q8N6U8 529 aaKnown RBP9.12□□□□□ -0.95
CHD7-203ENST00000525508 GSDMAQ96QA5 445 aa9.12□□□□□ -0.95
CHD7-203ENST00000525508 SH2D3AQ9BRG2 576 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms