RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 IFIT1P09914 478 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 PAFAH1B1P43034 410 aa12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 RPS6KA3P51812 740 aa12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 XRCC4Q13426 336 aa12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 HLTFQ14527 1009 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 SAFBQ15424 915 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 FAM133BQ5BKY9 247 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 PROCA1Q8NCQ7 364 aaPredicted RBP12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 SPATA20Q8TB22 786 aa12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 CAVIN3Q969G5 261 aa12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 ZNF570Q96NI8 536 aa12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 NUCKS1Q9H1E3 243 aaKnown RBP12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 UBN2Q6ZU65 1347 aa12.47□□□□□ -0.41
CLNS1A-204ENST00000525428 CDKL5O76039 1030 aa12.46□□□□□ -0.41
CLNS1A-204ENST00000525428 CYLC1P35663 651 aaPredicted RBP12.46□□□□□ -0.41
CLNS1A-204ENST00000525428 IFT20Q8IY31 132 aa12.46□□□□□ -0.41
CLNS1A-204ENST00000525428 NELFBQ8WX92 580 aa12.46□□□□□ -0.41
CLNS1A-204ENST00000525428 PANK4Q9NVE7 773 aa12.46□□□□□ -0.41
CLNS1A-204ENST00000525428 ZNHIT6Q9NWK9 470 aaKnown RBP12.46□□□□□ -0.41
CLNS1A-204ENST00000525428 GGT7Q9UJ14 662 aa12.46□□□□□ -0.41
CLNS1A-204ENST00000525428 FAM205CA6NFA0 338 aa12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 GOLGA8AA7E2F4 631 aa12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 BCL9O00512 1426 aa12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 ICA1Q05084 483 aa12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 NEXNQ0ZGT2 675 aa12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 TRIM14Q14142 442 aa12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 GKAP1Q5VSY0 366 aaPredicted RBP12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 TNS2Q63HR2 1409 aa12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 OXER1Q8TDS5 423 aa12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 AGAP11Q8TF27 550 aa12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 BATF3Q9NR55 127 aa12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 LIMA1Q9UHB6 759 aaKnown RBP12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 PARP4Q9UKK3 1724 aaKnown RBP12.46□□□□□ -0.42
CLNS1A-204ENST00000525428 ANO9A1A5B4 782 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 ITPK1Q13572 414 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 ZC3H12AQ5D1E8 599 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 APOA5Q6Q788 366 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 CYB5R4Q7L1T6 521 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 CCDC63Q8NA47 563 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 ITFG2Q969R8 447 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 CCDC47Q96A33 483 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 ANGEL1Q9UNK9 670 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 SHANK3Q9BYB0 1731 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 HMGB1P1B2RPK0 211 aaPredicted RBP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 B4E1Z4 1266 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 GCOM1H8Y6P7 765 aaPredicted RBP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 FOXP2O15409 715 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 ZBTB43O43298 467 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 TRAPPC3O43617 180 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 BUB1O43683 1085 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 TACC1O75410 805 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 DDX58O95786 925 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 PYGLP06737 847 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 MYZAPP0CAP1 466 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 RAB27AP51159 221 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 PAK1Q13153 545 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 BYSLQ13895 437 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 SPA17Q15506 151 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 TRIM68Q6AZZ1 485 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 RAPGEF5Q92565 580 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 PRCCQ92733 491 aaPredicted RBP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 NLRP3Q96P20 1036 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 GDAQ9Y2T3 454 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 LAMA4Q16363 1823 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 DCDC2CA8MYV0 355 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 B4DLN1 442 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 SMNDC1O75940 238 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 GCKRQ14397 625 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 NBPF9Q3BBW0 867 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 GLE1Q53GS7 698 aaKnown RBP12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 SYNE4Q8N205 404 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 MB21D1Q8N884 522 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 MDM1Q8TC05 714 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 CCDC42Q96M95 316 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 UBAC1Q9BSL1 405 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 COPRSQ9NQ92 184 aa12.45□□□□□ -0.42
CLNS1A-204ENST00000525428 LOC102724428A0A0B4J2F2 783 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 NEURL1BA8MQ27 555 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 PARP1P09874 1014 aaKnown RBP12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 SIK1P57059 783 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 SSRP1Q08945 709 aaKnown RBP12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 TRAF1Q13077 416 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 PAK2Q13177 524 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 PPP4R3AQ6IN85 833 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 TYW1BQ6NUM6 668 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 KCNV2Q8TDN2 545 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 CCT6BQ92526 530 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 CCDC85AQ96PX6 553 aaPredicted RBP12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 KRT12Q99456 494 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 EBF2Q9HAK2 575 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 CNOT8Q9UFF9 292 aaKnown RBP12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 GGA2Q9UJY4 613 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 TRPC5Q9UL62 973 aaPredicted RBP12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 SRPRBQ9Y5M8 271 aaKnown RBP12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 TOGARAM1Q9Y4F4 1720 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 RFX7Q2KHR2 1363 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 ZNF263O14978 683 aa12.44□□□□□ -0.42
CLNS1A-204ENST00000525428 SEMA3EO15041 775 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms