RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 CPT1AP50416 773 aa20.19■□□□□ 0.82
TSKU-202ENST00000525167 HDAC1Q13547 482 aaPredicted RBP20.19■□□□□ 0.82
TSKU-202ENST00000525167 TTBK2Q6IQ55 1244 aa20.19■□□□□ 0.82
TSKU-202ENST00000525167 RPUSD2Q8IZ73 545 aaKnown RBP20.19■□□□□ 0.82
TSKU-202ENST00000525167 WDR11Q9BZH6 1224 aa20.19■□□□□ 0.82
TSKU-202ENST00000525167 WDR19Q8NEZ3 1342 aa20.19■□□□□ 0.82
TSKU-202ENST00000525167 NFIBO00712 420 aa20.18■□□□□ 0.82
TSKU-202ENST00000525167 PFKMP08237 780 aa20.18■□□□□ 0.82
TSKU-202ENST00000525167 HSPD1P10809 573 aaKnown RBP20.18■□□□□ 0.82
TSKU-202ENST00000525167 PDHBP11177 359 aa20.18■□□□□ 0.82
TSKU-202ENST00000525167 RRP1P56182 461 aaKnown RBP20.18■□□□□ 0.82
TSKU-202ENST00000525167 TJAP1Q5JTD0 557 aa20.18■□□□□ 0.82
TSKU-202ENST00000525167 RRP12Q5JTH9 1297 aaKnown RBP20.18■□□□□ 0.82
TSKU-202ENST00000525167 USP38Q8NB14 1042 aa20.18■□□□□ 0.82
TSKU-202ENST00000525167 TRPV6Q9H1D0 765 aa20.18■□□□□ 0.82
TSKU-202ENST00000525167 ALDH8A1Q9H2A2 487 aaPredicted RBP20.18■□□□□ 0.82
TSKU-202ENST00000525167 DDX49Q9Y6V7 483 aaKnown RBP20.18■□□□□ 0.82
TSKU-202ENST00000525167 UMODL1Q5DID0 1318 aa20.18■□□□□ 0.82
TSKU-202ENST00000525167 CHD9Q3L8U1 2897 aa20.17■□□□□ 0.82
TSKU-202ENST00000525167 A0A0D9SFI3 127 aa20.17■□□□□ 0.82
TSKU-202ENST00000525167 PTPDC1A2A3K4 754 aa20.17■□□□□ 0.82
TSKU-202ENST00000525167 NKRFO15226 690 aaKnown RBP eCLIP20.17■□□□□ 0.82
TSKU-202ENST00000525167 BRDTQ58F21 947 aaPredicted RBP20.17■□□□□ 0.82
TSKU-202ENST00000525167 DNERQ8NFT8 737 aa20.17■□□□□ 0.82
TSKU-202ENST00000525167 FAM227BQ96M60 508 aa20.17■□□□□ 0.82
TSKU-202ENST00000525167 PURBQ96QR8 312 aaKnown RBP20.17■□□□□ 0.82
TSKU-202ENST00000525167 MAF1Q9H063 256 aa20.17■□□□□ 0.82
TSKU-202ENST00000525167 WNT8AQ9H1J5 351 aa20.17■□□□□ 0.82
TSKU-202ENST00000525167 CXXC1Q9P0U4 656 aaPredicted RBP20.17■□□□□ 0.82
TSKU-202ENST00000525167 RAD50Q92878 1312 aa20.17■□□□□ 0.82
TSKU-202ENST00000525167 B4DLN1 442 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 SNHG28P0DPA3 235 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 PTGS1P23219 599 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 MRPL12P52815 198 aaKnown RBP20.16■□□□□ 0.82
TSKU-202ENST00000525167 MFAP1P55081 439 aaKnown RBP20.16■□□□□ 0.82
TSKU-202ENST00000525167 CCL23P55773 120 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 PSMC6P62333 389 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 PURAQ00577 322 aaKnown RBP20.16■□□□□ 0.82
TSKU-202ENST00000525167 ZNF543Q08ER8 600 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 TMEM63BQ5T3F8 832 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 RNF207Q6ZRF8 634 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 CLEC4DQ8WXI8 215 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 RNF41Q9H4P4 317 aaPredicted RBP20.16■□□□□ 0.82
TSKU-202ENST00000525167 PRDM12Q9H4Q4 367 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 SLC28A3Q9HAS3 691 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 GPCPD1Q9NPB8 672 aa20.16■□□□□ 0.82
TSKU-202ENST00000525167 FRMPD2Q68DX3 1309 aaPredicted RBP20.16■□□□□ 0.82
TSKU-202ENST00000525167 KPNA6O60684 536 aa20.15■□□□□ 0.82
TSKU-202ENST00000525167 EDNRBP24530 442 aa20.15■□□□□ 0.82
TSKU-202ENST00000525167 GPATCH4Q5T3I0 446 aaKnown RBP20.15■□□□□ 0.82
TSKU-202ENST00000525167 SLC30A10Q6XR72 485 aa20.15■□□□□ 0.82
TSKU-202ENST00000525167 MFSD6Q6ZSS7 791 aa20.15■□□□□ 0.82
TSKU-202ENST00000525167 OTOP2Q7RTS6 562 aa20.15■□□□□ 0.82
TSKU-202ENST00000525167 ATXN2LQ8WWM7 1075 aaKnown RBP20.15■□□□□ 0.82
TSKU-202ENST00000525167 MTG1Q9BT17 334 aaPredicted RBP20.15■□□□□ 0.82
TSKU-202ENST00000525167 GPHNQ9NQX3 736 aaPredicted RBP20.15■□□□□ 0.82
TSKU-202ENST00000525167 SLC4A7Q9Y6M7 1214 aa20.15■□□□□ 0.82
TSKU-202ENST00000525167 CCDC171Q6TFL3 1326 aa20.15■□□□□ 0.82
TSKU-202ENST00000525167 TNKSO95271 1327 aa20.14■□□□□ 0.81
TSKU-202ENST00000525167 CALML3P27482 149 aa20.14■□□□□ 0.81
TSKU-202ENST00000525167 PDE4DQ08499 809 aa20.14■□□□□ 0.81
TSKU-202ENST00000525167 AAMPQ13685 434 aa20.14■□□□□ 0.81
TSKU-202ENST00000525167 PPP2R5BQ15173 497 aa20.14■□□□□ 0.81
TSKU-202ENST00000525167 ZNF589Q86UQ0 364 aaPredicted RBP20.14■□□□□ 0.81
TSKU-202ENST00000525167 RGS22Q8NE09 1264 aa20.14■□□□□ 0.81
TSKU-202ENST00000525167 OR6J1Q8NGC5 347 aa20.14■□□□□ 0.81
TSKU-202ENST00000525167 SCFD2Q8WU76 684 aa20.14■□□□□ 0.81
TSKU-202ENST00000525167 PRDM6Q9NQX0 595 aa20.14■□□□□ 0.81
TSKU-202ENST00000525167 RPS6P62753 249 aaKnown RBP20.13■□□□□ 0.81
TSKU-202ENST00000525167 NMIQ13287 307 aaPredicted RBP20.13■□□□□ 0.81
TSKU-202ENST00000525167 NFRKBQ6P4R8 1299 aa20.13■□□□□ 0.81
TSKU-202ENST00000525167 ESR2Q92731 530 aa20.13■□□□□ 0.81
TSKU-202ENST00000525167 NKX2-4Q9H2Z4 354 aa20.13■□□□□ 0.81
TSKU-202ENST00000525167 PCDHA11Q9Y5I1 949 aa20.13■□□□□ 0.81
TSKU-202ENST00000525167 A6NJR5 290 aa20.12■□□□□ 0.81
TSKU-202ENST00000525167 RFC2P35250 354 aa20.12■□□□□ 0.81
TSKU-202ENST00000525167 HAND2P61296 217 aa20.12■□□□□ 0.81
TSKU-202ENST00000525167 PTPN11Q06124 597 aaPredicted RBP20.12■□□□□ 0.81
TSKU-202ENST00000525167 CCDC178Q5BJE1 867 aa20.12■□□□□ 0.81
TSKU-202ENST00000525167 DGKHQ86XP1 1220 aa20.12■□□□□ 0.81
TSKU-202ENST00000525167 CRBNQ96SW2 442 aa20.12■□□□□ 0.81
TSKU-202ENST00000525167 TRMT13Q9NUP7 481 aaKnown RBP20.12■□□□□ 0.81
TSKU-202ENST00000525167 THEGQ9P2T0 379 aa20.12■□□□□ 0.81
TSKU-202ENST00000525167 YBX2Q9Y2T7 364 aaKnown RBP20.12■□□□□ 0.81
TSKU-202ENST00000525167 TTC28Q96AY4 2481 aa20.11■□□□□ 0.81
TSKU-202ENST00000525167 PITPNM1O00562 1244 aa20.11■□□□□ 0.81
TSKU-202ENST00000525167 MYL3P08590 195 aa20.11■□□□□ 0.81
TSKU-202ENST00000525167 ADGRE1Q14246 886 aa20.11■□□□□ 0.81
TSKU-202ENST00000525167 VWCEQ96DN2 955 aa20.11■□□□□ 0.81
TSKU-202ENST00000525167 SCLYQ96I15 445 aa20.11■□□□□ 0.81
TSKU-202ENST00000525167 SCN10AQ9Y5Y9 1956 aa20.11■□□□□ 0.81
TSKU-202ENST00000525167 TRIM6-TRIM34B2RNG4 842 aa20.1■□□□□ 0.81
TSKU-202ENST00000525167 ATP2A2P16615 1042 aaKnown RBP20.1■□□□□ 0.81
TSKU-202ENST00000525167 TBC1D10CQ8IV04 446 aa20.1■□□□□ 0.81
TSKU-202ENST00000525167 GBF1Q92538 1859 aa20.09■□□□□ 0.81
TSKU-202ENST00000525167 ZBBXA8MT70 800 aa20.09■□□□□ 0.81
TSKU-202ENST00000525167 TNFRSF10AO00220 468 aa20.09■□□□□ 0.81
TSKU-202ENST00000525167 ZNF213O14771 459 aa20.09■□□□□ 0.81
TSKU-202ENST00000525167 TXNP10599 105 aaKnown RBP20.09■□□□□ 0.81
TSKU-202ENST00000525167 CYP2C9P11712 490 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms