RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 RGS2P41220 211 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 NAPAP54920 295 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 RPS6P62753 249 aaKnown RBP5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 AKAP17AQ02040 695 aaKnown RBP5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 CACNB2Q08289 660 aaPredicted RBP5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 ARHGEF6Q15052 776 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 ANKRD1Q15327 319 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 GJC2Q5T442 439 aaPredicted RBP5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 FBXL16Q8N461 479 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 TRPV1Q8NER1 839 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 IL31RAQ8NI17 732 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 SYTL5Q8TDW5 730 aaPredicted RBP5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 SOCS4Q8WXH5 440 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 GTF3C6Q969F1 213 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 ABHD8Q96I13 439 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 TMX3Q96JJ7 454 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 MAML3Q96JK9 1138 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 MAP3K14Q99558 947 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 APBA2Q99767 749 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 LZTS2Q9BRK4 669 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 ALDH8A1Q9H2A2 487 aaPredicted RBP5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 PDGFCQ9NRA1 345 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 PCDH10Q9P2E7 1040 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 ORC3Q9UBD5 711 aaPredicted RBP5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 FBXO40Q9UH90 709 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 KCNJ14Q9UNX9 436 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 MRPL11Q9Y3B7 192 aaKnown RBP5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 CASP8AP2Q9UKL3 1982 aa5.31□□□□□ -1.56
CHMP4A-202ENST00000524955 CCDC196A0A1B0GTZ2 297 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 POTEFA5A3E0 1075 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 SMCO2A6NFE2 343 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 GCOM1H8Y6P7 765 aaPredicted RBP5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 MEIS2O14770 477 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 ADCY6O43306 1168 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 PRPF3O43395 683 aaKnown RBP5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 STRNO43815 780 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 ST18O60284 1047 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 POLR2MP0CAP2 368 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 CCL5P13501 91 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 COPB2P35606 906 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 ALDH5A1P51649 535 aaPredicted RBP5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 NLRP5P59047 1200 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 IRF5Q13568 498 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 PFKFB3Q16875 520 aaPredicted RBP5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 TKFCQ3LXA3 575 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 ARHGEF16Q5VV41 709 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 JAKMIP3Q5VZ66 844 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 MFSD14CQ5VZR4 134 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 ARMCX2Q7L311 632 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 FBXO16Q8IX29 292 aaPredicted RBP5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 TRIM22Q8IYM9 498 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 FAM133AQ8N9E0 248 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 SLAIN1Q8ND83 568 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 NSUN7Q8NE18 718 aaKnown RBP5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 SMARCC2Q8TAQ2 1214 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 PPP1R13LQ8WUF5 828 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 RMDN3Q96TC7 470 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 ALG1Q9BT22 464 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 RNF208Q9H0X6 261 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 PSTPIP2Q9H939 334 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 BARHL2Q9NY43 387 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 RTEL1Q9NZ71 1219 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 PKD2L1Q9P0L9 805 aa5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 ZHX1Q9UKY1 873 aaPredicted RBP5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 COL11A1P12107 1806 aaPredicted RBP5.3□□□□□ -1.56
CHMP4A-202ENST00000524955 NID2Q14112 1375 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 PFASO15067 1338 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 FAM205CA6NFA0 338 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 GNRH1P01148 92 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 HMGCRP04035 888 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 HOXC6P09630 235 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 XRCC5P13010 732 aaKnown RBP5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 EN2P19622 333 aaPredicted RBP5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 SMARCA1P28370 1054 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 ADCYAP1R1P41586 468 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 HSD17B4P51659 736 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 ADCY7P51828 1080 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 RCAN1P53805 252 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 PRMT2P55345 433 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 PDE4DQ08499 809 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 PKN2Q16513 984 aaKnown RBP5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 CPLX2Q6PUV4 134 aaKnown RBP5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 SEPT14Q6ZU15 432 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 MCF2L2Q86YR7 1114 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 ABRAQ8N0Z2 381 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 OXER1Q8TDS5 423 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 COPS5Q92905 334 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 CUL5Q93034 780 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 ZNF333Q96JL9 665 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 ZSCAN31Q96LW9 406 aaPredicted RBP5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 DEFB118Q96PH6 123 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 TINF2Q9BSI4 451 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 RNF26Q9BY78 433 aaPredicted RBP5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 BCAS3Q9H6U6 928 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 PXMP2Q9NR77 195 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 PCDHA6Q9UN73 950 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 PCDHA8Q9Y5H6 950 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms