RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 NKRFO15226 690 aaKnown RBP eCLIP12.81□□□□□ -0.369e-11■□□□□ 11.3
PTPRK-217ENST00000524534 PLEKP08567 350 aaPredicted RBP12.81□□□□□ -0.36
PTPRK-217ENST00000524534 GRM4Q14833 912 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 CCDC96Q2M329 555 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 SLC35G1Q2M3R5 365 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 FKBP15Q5T1M5 1219 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 CABP7Q86V35 215 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 SPATA4Q8NEY3 305 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 HDAC7Q8WUI4 952 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 LRRC1Q9BTT6 524 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 IL17RBQ9NRM6 502 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 BTG4Q9NY30 223 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 ARHGAP20Q9P2F6 1191 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 DMGDHQ9UI17 866 aaKnown RBP12.81□□□□□ -0.36
PTPRK-217ENST00000524534 MAD2L2Q9UI95 211 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 MINPP1Q9UNW1 487 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 GNAQP50148 359 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 SND1Q7KZF4 910 aaKnown RBP eCLIP12.81□□□□□ -0.36
PTPRK-217ENST00000524534 PNMA1Q8ND90 353 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 IFIH1Q9BYX4 1025 aaKnown RBP12.81□□□□□ -0.36
PTPRK-217ENST00000524534 SIK3Q9Y2K2 1263 aa12.81□□□□□ -0.36
PTPRK-217ENST00000524534 KIAA1551Q9HCM1 1747 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 A0A087WUV0 522 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-217ENST00000524534 GOLGA8KD6RF30 607 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 STXBP3O00186 592 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 FCER1AP12319 257 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 TXNRD1Q16881 649 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 GBP6Q6ZN66 633 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
PTPRK-217ENST00000524534 OSBPL9Q96SU4 736 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 FAM107BQ9H098 131 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 MLXIPQ9HAP2 919 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 BARHL2Q9NY43 387 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 EXOC5O00471 708 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 MOCS3O95396 460 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 EPB41P11171 864 aaKnown RBP12.8□□□□□ -0.36
PTPRK-217ENST00000524534 TCP1P17987 556 aaKnown RBP12.8□□□□□ -0.36
PTPRK-217ENST00000524534 NT5C2P49902 561 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 KIF11P52732 1056 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 ASIC1P78348 528 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 TFAP4Q01664 338 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 SF3B3Q15393 1217 aaKnown RBP12.8□□□□□ -0.36
PTPRK-217ENST00000524534 CENPPQ6IPU0 288 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 C3orf67Q6ZVT6 689 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 SEMA6BQ9H3T3 888 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 TCP11L1Q9NUJ3 509 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 HYOU1Q9Y4L1 999 aa12.8□□□□□ -0.36
PTPRK-217ENST00000524534 CYTH3O43739 400 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 OR52Z1P0C646 297 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 TNFRSF8P28908 595 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 EPHB4P54760 987 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 SF3B2Q13435 895 aaKnown RBP12.79□□□□□ -0.36
PTPRK-217ENST00000524534 VWA3BQ502W6 1294 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 TADA2BQ86TJ2 420 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 KIAA0895Q8NCT3 520 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 CAPS2Q9BXY5 557 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 GRIN2DO15399 1336 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 EPHB6O15197 1021 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 PJA2O43164 708 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 OPA1O60313 960 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 EIF4A3P38919 411 aaKnown RBP12.79□□□□□ -0.36
PTPRK-217ENST00000524534 AMPD3Q01432 767 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 ALS2CLQ60I27 953 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 ICE2Q659A1 982 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 HAUS3Q68CZ6 603 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 CNNM4Q6P4Q7 775 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 NFRKBQ6P4R8 1299 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 EMBQ6PCB8 327 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 CAVIN3Q969G5 261 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 HINFPQ9BQA5 517 aa12.79□□□□□ -0.36
PTPRK-217ENST00000524534 EIF3HO15372 352 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■□□□□ 10.9
PTPRK-217ENST00000524534 ATP6V1AP38606 617 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 CCT5P48643 541 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 HEATR3Q7Z4Q2 680 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 ALS2CR12Q96Q35 445 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 STIM2Q9P246 746 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 ABCB11O95342 1321 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 USP17L8P0C7I0 530 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 KLRK1P26718 216 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 PRDX5P30044 214 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 SKOR1P84550 965 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 SLC7A5Q01650 507 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 C12orf60Q5U649 245 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 TSEN2Q8NCE0 465 aaKnown RBP12.78□□□□□ -0.36
PTPRK-217ENST00000524534 DRC1Q96MC2 740 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 MMTAG2Q9BU76 263 aaKnown RBP12.78□□□□□ -0.36
PTPRK-217ENST00000524534 ZMYND12Q9H0C1 365 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 MCM9Q9NXL9 1143 aa12.78□□□□□ -0.36
PTPRK-217ENST00000524534 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
PTPRK-217ENST00000524534 NNTQ13423 1086 aa12.77□□□□□ -0.37
PTPRK-217ENST00000524534 MAN2A1Q16706 1144 aa12.77□□□□□ -0.37
PTPRK-217ENST00000524534 ASTE1Q2TB18 679 aaPredicted RBP12.77□□□□□ -0.37
PTPRK-217ENST00000524534 ERFEQ4G0M1 354 aa12.77□□□□□ -0.37
PTPRK-217ENST00000524534 KRT25Q7Z3Z0 450 aa12.77□□□□□ -0.37
PTPRK-217ENST00000524534 EHD4Q9H223 541 aa12.77□□□□□ -0.37
PTPRK-217ENST00000524534 SALL4Q9UJQ4 1053 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms