RNA–Protein interactions for RNA: ENST00000524500.5

CTSB-206, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-206ENST00000524500 PDE4DQ08499 809 aa21.97■■□□□ 1.11
CTSB-206ENST00000524500 QRICH1Q2TAL8 776 aa21.97■■□□□ 1.11
CTSB-206ENST00000524500 TAPT1Q6NXT6 567 aa21.97■■□□□ 1.11
CTSB-206ENST00000524500 MCF2L2Q86YR7 1114 aa21.97■■□□□ 1.11
CTSB-206ENST00000524500 PDGFCQ9NRA1 345 aa21.97■■□□□ 1.11
CTSB-206ENST00000524500 GNEQ9Y223 722 aaKnown RBP21.97■■□□□ 1.11
CTSB-206ENST00000524500 MRPL11Q9Y3B7 192 aaKnown RBP21.97■■□□□ 1.11
CTSB-206ENST00000524500 Q9Y3F1 56 aa21.97■■□□□ 1.11
CTSB-206ENST00000524500 TAF6LQ9Y6J9 622 aa21.97■■□□□ 1.11
CTSB-206ENST00000524500 DYNC1LI2O43237 492 aaPredicted RBP21.96■■□□□ 1.11
CTSB-206ENST00000524500 CLTBP09497 229 aa21.96■■□□□ 1.11
CTSB-206ENST00000524500 SMPD1P17405 629 aa21.96■■□□□ 1.11
CTSB-206ENST00000524500 TMEM67Q5HYA8 995 aa21.96■■□□□ 1.11
CTSB-206ENST00000524500 STOX1Q6ZVD7 989 aa21.96■■□□□ 1.11
CTSB-206ENST00000524500 STAG2Q8N3U4 1231 aa21.96■■□□□ 1.11
CTSB-206ENST00000524500 LSG1Q9H089 658 aaKnown RBP21.96■■□□□ 1.11
CTSB-206ENST00000524500 PDLIM7Q9NR12 457 aa21.96■■□□□ 1.11
CTSB-206ENST00000524500 MAD2L2Q9UI95 211 aa21.96■■□□□ 1.11
CTSB-206ENST00000524500 PALM3A6NDB9 673 aaPredicted RBP21.95■■□□□ 1.1
CTSB-206ENST00000524500 DCDC2CA8MYV0 355 aa21.95■■□□□ 1.1
CTSB-206ENST00000524500 IRX5P78411 483 aaPredicted RBP21.95■■□□□ 1.1
CTSB-206ENST00000524500 FSCN1Q16658 493 aaKnown RBP21.95■■□□□ 1.1
CTSB-206ENST00000524500 CASC1Q6TDU7 716 aa21.95■■□□□ 1.1
CTSB-206ENST00000524500 CHST3Q7LGC8 479 aa21.95■■□□□ 1.1
CTSB-206ENST00000524500 ANKRD33Q7Z3H0 272 aa21.95■■□□□ 1.1
CTSB-206ENST00000524500 CATIPQ7Z7H3 387 aa21.95■■□□□ 1.1
CTSB-206ENST00000524500 TOX2Q96NM4 488 aa21.95■■□□□ 1.1
CTSB-206ENST00000524500 AMNQ9BXJ7 453 aa21.95■■□□□ 1.1
CTSB-206ENST00000524500 ANO2Q9NQ90 1003 aa21.95■■□□□ 1.1
CTSB-206ENST00000524500 PCDH10Q9P2E7 1040 aa21.95■■□□□ 1.1
CTSB-206ENST00000524500 MROH7Q68CQ1 1323 aa21.95■■□□□ 1.1
CTSB-206ENST00000524500 A0A0U1RQG5 324 aaPredicted RBP21.94■■□□□ 1.1
CTSB-206ENST00000524500 CABYRO75952 493 aa21.94■■□□□ 1.1
CTSB-206ENST00000524500 BEX3Q00994 111 aa21.94■■□□□ 1.1
CTSB-206ENST00000524500 TRAF1Q13077 416 aa21.94■■□□□ 1.1
CTSB-206ENST00000524500 GRM4Q14833 912 aa21.94■■□□□ 1.1
CTSB-206ENST00000524500 MB21D2Q8IYB1 491 aaPredicted RBP21.94■■□□□ 1.1
CTSB-206ENST00000524500 CCDC136Q96JN2 1154 aa21.94■■□□□ 1.1
CTSB-206ENST00000524500 WDR11Q9BZH6 1224 aa21.94■■□□□ 1.1
CTSB-206ENST00000524500 TRIM43BA6NCK2 446 aa21.93■■□□□ 1.1
CTSB-206ENST00000524500 CTAGE5O15320 804 aa21.93■■□□□ 1.1
CTSB-206ENST00000524500 LRIT3Q3SXY7 679 aa21.93■■□□□ 1.1
CTSB-206ENST00000524500 DUSP28Q4G0W2 176 aa21.93■■□□□ 1.1
CTSB-206ENST00000524500 SH3RF1Q7Z6J0 888 aa21.93■■□□□ 1.1
CTSB-206ENST00000524500 TRIM43Q96BQ3 446 aaPredicted RBP21.93■■□□□ 1.1
CTSB-206ENST00000524500 MTA3Q9BTC8 594 aa21.93■■□□□ 1.1
CTSB-206ENST00000524500 TMEM39AQ9NV64 488 aa21.93■■□□□ 1.1
CTSB-206ENST00000524500 ARVCFO00192 962 aa21.92■■□□□ 1.1
CTSB-206ENST00000524500 ZBTB5O15062 677 aa21.92■■□□□ 1.1
CTSB-206ENST00000524500 EDNRBP24530 442 aa21.92■■□□□ 1.1
CTSB-206ENST00000524500 MCM5P33992 734 aa21.92■■□□□ 1.1
CTSB-206ENST00000524500 TROAPQ12815 778 aa21.92■■□□□ 1.1
CTSB-206ENST00000524500 SKAP1Q86WV1 359 aa21.92■■□□□ 1.1
CTSB-206ENST00000524500 IGDCC4Q8TDY8 1250 aa21.92■■□□□ 1.1
CTSB-206ENST00000524500 NSUN6Q8TEA1 469 aaKnown RBP21.92■■□□□ 1.1
CTSB-206ENST00000524500 BADQ92934 168 aa21.92■■□□□ 1.1
CTSB-206ENST00000524500 MTMR8Q96EF0 704 aa21.92■■□□□ 1.1
CTSB-206ENST00000524500 SENP2Q9HC62 589 aa21.92■■□□□ 1.1
CTSB-206ENST00000524500 LCTP09848 1927 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 RBM47A0AV96 593 aaKnown RBP21.91■■□□□ 1.1
CTSB-206ENST00000524500 SOX1O00570 391 aaPredicted RBP21.91■■□□□ 1.1
CTSB-206ENST00000524500 SLC27A2O14975 620 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 KIAA0355O15063 1070 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 RAG1P15918 1043 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 ANTXR2P58335 489 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 CREB3L3Q68CJ9 461 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 TMTC2Q8N394 836 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 SYTL5Q8TDW5 730 aaPredicted RBP21.91■■□□□ 1.1
CTSB-206ENST00000524500 SCFD2Q8WU76 684 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 TBC1D5Q92609 795 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 PCDHA1Q9Y5I3 950 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 LRRC37A2A6NM11 1700 aa21.91■■□□□ 1.1
CTSB-206ENST00000524500 NKRFO15226 690 aaKnown RBP eCLIP21.9■■□□□ 1.12e-7■■□□□ 14
CTSB-206ENST00000524500 PRC1O43663 620 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 CFBP00751 764 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 CDK7P50613 346 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 FAAP100Q0VG06 881 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 PPP2R5BQ15173 497 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 NECTIN1Q15223 517 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 BRDTQ58F21 947 aaPredicted RBP21.9■■□□□ 1.1
CTSB-206ENST00000524500 RNF20Q5VTR2 975 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 CXCL17Q6UXB2 119 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 HOMER1Q86YM7 354 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 LRCH3Q96II8 777 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 IWS1Q96ST2 819 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 RMDN3Q96TC7 470 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 SEZ6LQ9BYH1 1024 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 RIOX1Q9H6W3 641 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 LAMA3Q16787 3333 aa21.9■■□□□ 1.1
CTSB-206ENST00000524500 TLR3O15455 904 aaKnown RBP21.89■■□□□ 1.09
CTSB-206ENST00000524500 CPT1AP50416 773 aa21.89■■□□□ 1.09
CTSB-206ENST00000524500 TMEM63BQ5T3F8 832 aa21.89■■□□□ 1.09
CTSB-206ENST00000524500 ARHGEF16Q5VV41 709 aa21.89■■□□□ 1.09
CTSB-206ENST00000524500 NFXL1Q6ZNB6 911 aa21.89■■□□□ 1.09
CTSB-206ENST00000524500 SAMD3Q8N6K7 520 aa21.89■■□□□ 1.09
CTSB-206ENST00000524500 OR6J1Q8NGC5 347 aa21.89■■□□□ 1.09
CTSB-206ENST00000524500 CTCFLQ8NI51 663 aaPredicted RBP21.89■■□□□ 1.09
CTSB-206ENST00000524500 TMEM87BQ96K49 555 aa21.89■■□□□ 1.09
CTSB-206ENST00000524500 TAAR1Q96RJ0 339 aa21.89■■□□□ 1.09
CTSB-206ENST00000524500 MAP3K14Q99558 947 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms