RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 SLC38A10Q9HBR0 1119 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 KMT5AQ9NQR1 393 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 XDHP47989 1333 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 S100BP04271 92 aaPredicted RBP11.48□□□□□ -0.57
CTSC-203ENST00000524463 SCG2P13521 617 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 DDIT3P35638 169 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 ANO4Q32M45 955 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 MUM1L1Q5H9M0 696 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 SEPT12Q8IYM1 358 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 EXT2Q93063 718 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 ATP6V1E2Q96A05 226 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 CHAMP1Q96JM3 812 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 CEP170P1Q96L14 293 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 TACO1Q9BSH4 297 aaKnown RBP11.48□□□□□ -0.57
CTSC-203ENST00000524463 FEZ2Q9UHY8 353 aaPredicted RBP11.48□□□□□ -0.57
CTSC-203ENST00000524463 FAM196BA6NMK8 535 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 ACTN1P12814 892 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 BTBD18B2RXH4 712 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 NDUFAB1O14561 156 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 EIF2AK2P19525 551 aaKnown RBP11.48□□□□□ -0.57
CTSC-203ENST00000524463 ZNF75DP51815 510 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 YWHAGP61981 247 aaKnown RBP eCLIP11.48□□□□□ -0.57
CTSC-203ENST00000524463 ADALQ6DHV7 355 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 PNMA8AQ86V59 439 aaPredicted RBP11.48□□□□□ -0.57
CTSC-203ENST00000524463 MLKLQ8NB16 471 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 IL17REQ8NFR9 667 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 CASQ2O14958 399 aaPredicted RBP11.48□□□□□ -0.57
CTSC-203ENST00000524463 BFSP1Q12934 665 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 LLPHQ9BRT6 129 aaKnown RBP11.48□□□□□ -0.57
CTSC-203ENST00000524463 MAP3K15Q6ZN16 1313 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 KIAA0232Q92628 1395 aa11.48□□□□□ -0.57
CTSC-203ENST00000524463 POC1B-GALNT4F8VUJ3 575 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 FGAP02671 866 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 HSPD1P10809 573 aaKnown RBP11.47□□□□□ -0.57
CTSC-203ENST00000524463 SMAD1Q15797 465 aaKnown RBP11.47□□□□□ -0.57
CTSC-203ENST00000524463 CDO1Q16878 200 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 USP17L2Q6R6M4 530 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 RETREG2Q8NC44 543 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 ZNF341Q9BYN7 854 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 PTPRKQ15262 1439 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 A0A087WWV3 80 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 GIGYF1O75420 1035 aaPredicted RBP11.47□□□□□ -0.57
CTSC-203ENST00000524463 KRT71Q3SY84 523 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 SUPT20HL1Q3ZLR7 823 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 ATP2A3Q93084 1043 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 SYNDIG1Q9H7V2 258 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 ZNF277Q9NRM2 450 aaPredicted RBP11.47□□□□□ -0.57
CTSC-203ENST00000524463 HACD3Q9P035 362 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 DDX41Q9UJV9 622 aaKnown RBP11.47□□□□□ -0.57
CTSC-203ENST00000524463 SASH1O94885 1247 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 BAG2O95816 211 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 ARHGEF6Q15052 776 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 TTC31Q49AM3 519 aaPredicted RBP11.47□□□□□ -0.57
CTSC-203ENST00000524463 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 SFI1A8K8P3 1242 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 CDC25AP30304 524 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 ELF1P32519 619 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 SESN3P58005 492 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 CFAP221Q4G0U5 840 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 SMIM5Q71RC9 77 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 ARFGAP2Q8N6H7 521 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 ARMCX3Q9UH62 379 aaPredicted RBP11.47□□□□□ -0.57
CTSC-203ENST00000524463 G3BP2Q9UN86 482 aaKnown RBP11.47□□□□□ -0.57
CTSC-203ENST00000524463 KDM2BQ8NHM5 1336 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 PTGDRQ13258 359 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 PRPSAP1Q14558 356 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 GRAMD1CQ8IYS0 662 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
CTSC-203ENST00000524463 XPO4Q9C0E2 1151 aaKnown RBP11.47□□□□□ -0.57
CTSC-203ENST00000524463 POLD4Q9HCU8 107 aa11.47□□□□□ -0.57
CTSC-203ENST00000524463 CHL1O00533 1208 aa11.46□□□□□ -0.57
CTSC-203ENST00000524463 RFC1P35251 1148 aaPredicted RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 KIF11P52732 1056 aa11.46□□□□□ -0.57
CTSC-203ENST00000524463 TRIP13Q15645 432 aaPredicted RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 HABP4Q5JVS0 413 aaKnown RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 NOSTRINQ8IVI9 506 aa11.46□□□□□ -0.57
CTSC-203ENST00000524463 MIPOL1Q8TD10 442 aa11.46□□□□□ -0.57
CTSC-203ENST00000524463 ANTXR1Q9H6X2 564 aa11.46□□□□□ -0.57
CTSC-203ENST00000524463 STX2P32856 288 aa11.46□□□□□ -0.57
CTSC-203ENST00000524463 HAUS1Q96CS2 278 aa11.46□□□□□ -0.57
CTSC-203ENST00000524463 INTS4Q96HW7 963 aaKnown RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 RPN1P04843 607 aaKnown RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 ANXA13P27216 316 aa11.46□□□□□ -0.57
CTSC-203ENST00000524463 IREB2P48200 963 aaKnown RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 CTTNQ14247 550 aaKnown RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 RWDD4Q6NW29 188 aaKnown RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 C1orf228Q6PIY5 440 aa11.46□□□□□ -0.57
CTSC-203ENST00000524463 ZNF467Q7Z7K2 595 aaPredicted RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 GBP7Q8N8V2 638 aaPredicted RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 PLCB1Q9NQ66 1216 aa11.46□□□□□ -0.57
CTSC-203ENST00000524463 CPSF3Q9UKF6 684 aaKnown RBP11.46□□□□□ -0.57
CTSC-203ENST00000524463 EDC4Q6P2E9 1401 aaKnown RBP11.46□□□□□ -0.58
CTSC-203ENST00000524463 YEATS2Q9ULM3 1422 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 MMP10P09238 476 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 PTPREP23469 700 aa11.46□□□□□ -0.58
CTSC-203ENST00000524463 NSFP46459 744 aaKnown RBP11.46□□□□□ -0.58
CTSC-203ENST00000524463 ATP1A2P50993 1020 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms