RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 KDM7AQ6ZMT4 941 aa11.4□□□□□ -0.58
SPIDR-225ENST00000524141 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.4□□□□□ -0.58
SPIDR-225ENST00000524141 YTHDF3Q7Z739 585 aaKnown RBP11.4□□□□□ -0.58
SPIDR-225ENST00000524141 OTUD6BQ8N6M0 293 aa11.4□□□□□ -0.58
SPIDR-225ENST00000524141 SNAP23O00161 211 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 AKR1B10O60218 316 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 FSBPO95073 299 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 KLK7P49862 253 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 PAK2Q13177 524 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 CFAP221Q4G0U5 840 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 EMC10Q5UCC4 262 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 GALNT17Q6IS24 598 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 TYW1BQ6NUM6 668 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 C2CD5Q86YS7 1000 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 ZNF34Q8IZ26 560 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 RNF10Q8N5U6 811 aaKnown RBP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 EHD4Q9H223 541 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 ABCF2Q9UG63 623 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 ABCB11O95342 1321 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 CACNA1SQ13698 1873 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 MEFVO15553 781 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 PJA2O43164 708 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 MOCS3O95396 460 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 AMPD3Q01432 767 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 SLC7A5Q01650 507 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 PDE4DQ08499 809 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 CCDC152Q4G0S7 254 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 CFAP58Q5T655 872 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 ANKRD40Q6AI12 368 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 NFRKBQ6P4R8 1299 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 KRT26Q7Z3Y9 468 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 MREGQ8N565 214 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 TSEN2Q8NCE0 465 aaKnown RBP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 C1orf131Q8NDD1 294 aaKnown RBP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 PIGBQ92521 554 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 ARL8AQ96BM9 186 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 CABS1Q96KC9 395 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 TCP11L1Q9NUJ3 509 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 ARHGAP20Q9P2F6 1191 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 CICQ96RK0 1608 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 SRRM3A6NNA2 597 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 H0YHG0 523 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 FGFR1OPO95684 399 aaKnown RBP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 CYP19A1P11511 503 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 MATR3P43243 847 aaKnown RBP eCLIP11.39□□□□□ -0.592e-6■■■■■ 27.8
SPIDR-225ENST00000524141 PDCLQ13371 301 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 CNNM4Q6P4Q7 775 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 DZIP3Q86Y13 1208 aaKnown RBP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 SMCR8Q8TEV9 937 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 ZIM3Q96PE6 472 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 NOX5Q96PH1 765 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 TRIM9Q9C026 710 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 EPN3Q9H201 632 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 MLXIPQ9HAP2 919 aa11.39□□□□□ -0.59
SPIDR-225ENST00000524141 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPIDR-225ENST00000524141 A0A1B0GUL6 1792 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 EIF4A3P38919 411 aaKnown RBP11.38□□□□□ -0.59
SPIDR-225ENST00000524141 GSCP56915 257 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-225ENST00000524141 CCDC178Q5BJE1 867 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 FBXW10Q5XX13 1052 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 ARHGAP27Q6ZUM4 889 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 RPAINQ86UA6 219 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 CD302Q8IX05 232 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 C7orf25Q9BPX7 421 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 LUC7LQ9NQ29 371 aaKnown RBP11.38□□□□□ -0.59
SPIDR-225ENST00000524141 GGA2Q9UJY4 613 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 SAMM50Q9Y512 469 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 CAPN7Q9Y6W3 813 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 ZNF804BA4D1E1 1349 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 LAMB1P07942 1786 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 PLEKP08567 350 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-225ENST00000524141 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-225ENST00000524141 NT5C2P49902 561 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 ASIC1P78348 528 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 VWA3BQ502W6 1294 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 KCNV1Q6PIU1 500 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 IQCKQ8N0W5 287 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 DAGLBQ8NCG7 672 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 TACO1Q9BSH4 297 aaKnown RBP11.38□□□□□ -0.59
SPIDR-225ENST00000524141 GDF3Q9NR23 364 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 SIK3Q9Y2K2 1263 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 FAM205AQ6ZU69 1335 aa11.38□□□□□ -0.59
SPIDR-225ENST00000524141 ITGB4P16144 1822 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 CYP2D7A0A087X1C5 515 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 PP2D1A8MPX8 630 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 SMIM22K7EJ46 135 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 HOXA7P31268 230 aaPredicted RBP11.37□□□□□ -0.59
SPIDR-225ENST00000524141 LSP1P33241 339 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 MAGEA1P43355 309 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 WHAMMQ8TF30 809 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.37□□□□□ -0.597e-7■■■■■ 70.8
SPIDR-225ENST00000524141 HINFPQ9BQA5 517 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 EDEM3Q9BZQ6 932 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 NDST4Q9H3R1 872 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 A1CFQ9NQ94 594 aaKnown RBP11.37□□□□□ -0.59
SPIDR-225ENST00000524141 RBM12Q9NTZ6 932 aaKnown RBP11.37□□□□□ -0.59
SPIDR-225ENST00000524141 ZBTB1Q9Y2K1 713 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 CASZ1Q86V15 1759 aa11.37□□□□□ -0.59
SPIDR-225ENST00000524141 SSU72P8A0A1W2PR75 194 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms