RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 ERVK-21P61565 698 aa11.15□□□□□ -0.62
PFDN1-207ENST00000524074 SRSF11Q05519 484 aaKnown RBP11.15□□□□□ -0.62
PFDN1-207ENST00000524074 ACBD5Q5T8D3 534 aaPredicted RBP11.15□□□□□ -0.62
PFDN1-207ENST00000524074 PNMA8AQ86V59 439 aaPredicted RBP11.15□□□□□ -0.62
PFDN1-207ENST00000524074 FBXO11Q86XK2 927 aa11.15□□□□□ -0.62
PFDN1-207ENST00000524074 CHST14Q8NCH0 376 aa11.15□□□□□ -0.62
PFDN1-207ENST00000524074 USP33Q8TEY7 942 aa11.15□□□□□ -0.62
PFDN1-207ENST00000524074 CHTF18Q8WVB6 975 aa11.15□□□□□ -0.62
PFDN1-207ENST00000524074 ACDQ96AP0 544 aa11.15□□□□□ -0.62
PFDN1-207ENST00000524074 ALG1Q9BT22 464 aa11.15□□□□□ -0.62
PFDN1-207ENST00000524074 SPTLC3Q9NUV7 552 aa11.15□□□□□ -0.62
PFDN1-207ENST00000524074 BSDC1Q9NW68 430 aaPredicted RBP11.15□□□□□ -0.62
PFDN1-207ENST00000524074 B4GALT6Q9UBX8 382 aa11.15□□□□□ -0.62
PFDN1-207ENST00000524074 GIT1Q9Y2X7 761 aa11.15□□□□□ -0.62
PFDN1-207ENST00000524074 SLITRK5O94991 958 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 THBDP07204 575 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 SRGAP2CP0DJJ0 459 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 SESN3P58005 492 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 PICALMQ13492 652 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 INAVAQ3KP66 663 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 TMEM177Q53S58 311 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 CWF19L1Q69YN2 538 aaKnown RBP11.14□□□□□ -0.63
PFDN1-207ENST00000524074 CPA6Q8N4T0 437 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 C2CD4AQ8NCU7 369 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-207ENST00000524074 TIFAQ96CG3 184 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 CLIP3Q96DZ5 547 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 COL25A1Q9BXS0 654 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-207ENST00000524074 GPR27Q9NS67 375 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 CHST7Q9NS84 486 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 USP25Q9UHP3 1055 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 RCAN3Q9UKA8 241 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 ST14Q9Y5Y6 855 aa11.14□□□□□ -0.63
PFDN1-207ENST00000524074 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-207ENST00000524074 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-207ENST00000524074 HMGB1P1B2RPK0 211 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-207ENST00000524074 STXBP3O00186 592 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 TRAF5O00463 557 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 MEIS1O00470 390 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 SIGLEC6O43699 453 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 PPFIA4O75335 1185 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 FOSP01100 380 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-207ENST00000524074 RAC1P63000 192 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 PAK1Q13153 545 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 COL9A3Q14050 684 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-207ENST00000524074 TMEM240Q5SV17 173 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 C10orf62Q5T681 223 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-207ENST00000524074 GPAT2Q6NUI2 795 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 COPS5Q92905 334 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 CELF4Q9BZC1 486 aaKnown RBP11.13□□□□□ -0.63
PFDN1-207ENST00000524074 VTA1Q9NP79 307 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 BACE2Q9Y5Z0 518 aa11.13□□□□□ -0.63
PFDN1-207ENST00000524074 CFBP00751 764 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 CD3EP07766 207 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 RAB6AP20340 208 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 CYP7A1P22680 504 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 CYP2C19P33261 490 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 PDE6BP35913 854 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 FAM47CQ5HY64 1035 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 RNFT1Q5M7Z0 435 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 ANKRD34AQ69YU3 496 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 TMC3Q7Z5M5 1100 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 C11orf96Q7Z7L8 435 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 FMR1NBQ8N0W7 255 aaPredicted RBP11.12□□□□□ -0.63
PFDN1-207ENST00000524074 FRS2Q8WU20 508 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 SARGQ9BW04 601 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 ASCC2Q9H1I8 757 aaPredicted RBP11.12□□□□□ -0.63
PFDN1-207ENST00000524074 DAGLAQ9Y4D2 1042 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 NPFFR2Q9Y5X5 522 aa11.12□□□□□ -0.63
PFDN1-207ENST00000524074 LRRN2O75325 713 aa11.11□□□□□ -0.63
PFDN1-207ENST00000524074 CKMP06732 381 aa11.11□□□□□ -0.63
PFDN1-207ENST00000524074 ATP2A2P16615 1042 aaKnown RBP11.11□□□□□ -0.63
PFDN1-207ENST00000524074 LTBRP36941 435 aa11.11□□□□□ -0.63
PFDN1-207ENST00000524074 GRIK1P39086 918 aa11.11□□□□□ -0.63
PFDN1-207ENST00000524074 PCBP2Q15366 365 aaKnown RBP eCLIP11.11□□□□□ -0.63
PFDN1-207ENST00000524074 PGM2L1Q6PCE3 622 aa11.11□□□□□ -0.63
PFDN1-207ENST00000524074 CLRN3Q8NCR9 226 aa11.11□□□□□ -0.63
PFDN1-207ENST00000524074 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
PFDN1-207ENST00000524074 NPLOC4Q8TAT6 608 aa11.11□□□□□ -0.63
PFDN1-207ENST00000524074 GPRC5CQ9NQ84 441 aa11.11□□□□□ -0.63
PFDN1-207ENST00000524074 ZBTB21Q9ULJ3 1066 aa11.11□□□□□ -0.63
PFDN1-207ENST00000524074 TPX2Q9ULW0 747 aaKnown RBP11.11□□□□□ -0.63
PFDN1-207ENST00000524074 MRFAP1Q9Y605 127 aa11.11□□□□□ -0.63
PFDN1-207ENST00000524074 CCDC189A1A4V9 331 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 FZD9O00144 591 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 PRAMEF1O95521 474 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 GSNP06396 782 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 GTF2H3Q13889 308 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 MORC3Q14149 939 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 E4F1Q66K89 784 aaPredicted RBP11.1□□□□□ -0.63
PFDN1-207ENST00000524074 IL31Q6EBC2 164 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 LBX2Q6XYB7 198 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 PJA1Q8NG27 643 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 PCDH19Q8TAB3 1148 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 SLC5A5Q92911 643 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 FAXDC2Q96IV6 333 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 MCMBPQ9BTE3 642 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 ACSS3Q9H6R3 686 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 PRDM10Q9NQV6 1147 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 C14orf119Q9NWQ9 140 aa11.1□□□□□ -0.63
PFDN1-207ENST00000524074 MKS1Q9NXB0 559 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms