RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 GRIN2DO15399 1336 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 KAT6AQ92794 2004 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 MINDY4BA8MYZ0 360 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 ALAS1P13196 640 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 CPT1AP50416 773 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 ZSCAN25Q6NSZ9 544 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 CTR9Q6PD62 1173 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.11□□□□□ -0.63
PTPN12-216ENST00000523952 FBXO16Q8IX29 292 aaPredicted RBP11.11□□□□□ -0.63
PTPN12-216ENST00000523952 ZNF444Q8N0Y2 327 aaPredicted RBP11.11□□□□□ -0.63
PTPN12-216ENST00000523952 GJD3Q8N144 294 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 KATNBL1Q9H079 304 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 MTUS1Q9ULD2 1270 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 Q9Y3F1 56 aa11.11□□□□□ -0.63
PTPN12-216ENST00000523952 RAD50Q92878 1312 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 ATG2AQ2TAZ0 1938 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 BAIAP3O94812 1187 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 BMP3P12645 472 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 STAT2P52630 851 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 CHMP4BP1P59074 171 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 BFSP2Q13515 415 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 TKFCQ3LXA3 575 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 CCDC155Q8N6L0 562 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 FAM133AQ8N9E0 248 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 RHPN1Q8TCX5 695 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 GDPD5Q8WTR4 605 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 CHURC1Q8WUH1 139 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 TRERF1Q96PN7 1200 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 MTG1Q9BT17 334 aaPredicted RBP11.1□□□□□ -0.63
PTPN12-216ENST00000523952 UBE2ZQ9H832 354 aaPredicted RBP11.1□□□□□ -0.63
PTPN12-216ENST00000523952 VTA1Q9NP79 307 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 A1CFQ9NQ94 594 aaKnown RBP11.1□□□□□ -0.63
PTPN12-216ENST00000523952 PDGFCQ9NRA1 345 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 LMCD1Q9NZU5 365 aa11.1□□□□□ -0.63
PTPN12-216ENST00000523952 SOWAHBA6NEL2 793 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 TMEM232C9JQI7 657 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 TTLL1O95922 423 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 RASA1P20936 1047 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 KCNA5P22460 613 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 SLFN13Q68D06 897 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 NSMFQ6X4W1 530 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 LRRC47Q8N1G4 583 aaKnown RBP11.09□□□□□ -0.63
PTPN12-216ENST00000523952 OR6J1Q8NGC5 347 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 KIF1BPQ96EK5 621 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 BOLA2Q9H3K6 86 aa11.09□□□□□ -0.63
PTPN12-216ENST00000523952 ADD3Q9UEY8 706 aaKnown RBP11.09□□□□□ -0.63
PTPN12-216ENST00000523952 IQCF3P0C7M6 154 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 PTGS1P23219 599 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 NHLH1Q02575 133 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 UBE3CQ15386 1083 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 DUSP28Q4G0W2 176 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 PTCRAQ6ISU1 281 aaPredicted RBP11.08□□□□□ -0.64
PTPN12-216ENST00000523952 CEP85Q6P2H3 762 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 EP400NLQ6ZTU2 488 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 FAM160B2Q86V87 743 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 FAM178BQ8IXR5 827 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 RPAP2Q8IXW5 612 aaPredicted RBP11.08□□□□□ -0.64
PTPN12-216ENST00000523952 CHMP4CQ96CF2 233 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 CEP95Q96GE4 821 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 SNX27Q96L92 541 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 MPHOSPH6Q99547 160 aaKnown RBP11.08□□□□□ -0.64
PTPN12-216ENST00000523952 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPN12-216ENST00000523952 WDR11Q9BZH6 1224 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 CD320Q9NPF0 282 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 FAM50BQ9Y247 325 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 ZBED9Q6R2W3 1325 aa11.08□□□□□ -0.64
PTPN12-216ENST00000523952 ZNF318Q5VUA4 2279 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 APPP05067 770 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 TSPY3P0CV98 308 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 TSPY8P0CW00 308 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 SLC1A4P43007 532 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 TDO2P48775 406 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 PURAQ00577 322 aaKnown RBP11.07□□□□□ -0.64
PTPN12-216ENST00000523952 LRRFIP1Q32MZ4 808 aaKnown RBP11.07□□□□□ -0.64
PTPN12-216ENST00000523952 NBPF20Q3BBV1 942 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 PUS10Q3MIT2 529 aaKnown RBP11.07□□□□□ -0.64
PTPN12-216ENST00000523952 LEXMQ3ZCV2 418 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 LCE2DQ5TA82 110 aaPredicted RBP11.07□□□□□ -0.64
PTPN12-216ENST00000523952 ASTLQ6HA08 431 aaPredicted RBP11.07□□□□□ -0.64
PTPN12-216ENST00000523952 TAPT1Q6NXT6 567 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 GMCL1P1Q8NEA9 526 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 SLC39A7Q92504 469 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
PTPN12-216ENST00000523952 KCNH6Q9H252 994 aa11.07□□□□□ -0.64
PTPN12-216ENST00000523952 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
PTPN12-216ENST00000523952 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
PTPN12-216ENST00000523952 DCXO43602 365 aa11.06□□□□□ -0.64
PTPN12-216ENST00000523952 KPNA6O60684 536 aa11.06□□□□□ -0.64
PTPN12-216ENST00000523952 LPXNO60711 386 aa11.06□□□□□ -0.64
PTPN12-216ENST00000523952 HMMRO75330 724 aa11.06□□□□□ -0.64
PTPN12-216ENST00000523952 PRDM1O75626 825 aa11.06□□□□□ -0.64
PTPN12-216ENST00000523952 ARHGEF15O94989 841 aa11.06□□□□□ -0.64
PTPN12-216ENST00000523952 SLC3A2P08195 630 aaKnown RBP11.06□□□□□ -0.64
PTPN12-216ENST00000523952 IL9P15248 144 aa11.06□□□□□ -0.64
PTPN12-216ENST00000523952 PTPN11Q06124 597 aaPredicted RBP11.06□□□□□ -0.64
PTPN12-216ENST00000523952 PPP2R5BQ15173 497 aa11.06□□□□□ -0.64
PTPN12-216ENST00000523952 SBK1Q52WX2 424 aa11.06□□□□□ -0.64
PTPN12-216ENST00000523952 NFRKBQ6P4R8 1299 aa11.06□□□□□ -0.64
PTPN12-216ENST00000523952 STAG1Q8WVM7 1258 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms