RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 ZC3H12DA2A288 527 aaKnown RBP6.59□□□□□ -1.35
CLK4-213ENST00000523013 C2orf71A6NGG8 1288 aa6.59□□□□□ -1.35
CLK4-213ENST00000523013 B8ZZF3 427 aa6.59□□□□□ -1.35
CLK4-213ENST00000523013 PPP1R11O60927 126 aaPredicted RBP6.59□□□□□ -1.35
CLK4-213ENST00000523013 LIMS1P48059 325 aa6.59□□□□□ -1.35
CLK4-213ENST00000523013 PRR5P85299 388 aa6.59□□□□□ -1.35
CLK4-213ENST00000523013 AMPD2Q01433 879 aa6.59□□□□□ -1.35
CLK4-213ENST00000523013 VHLLQ6RSH7 139 aa6.59□□□□□ -1.35
CLK4-213ENST00000523013 TP53I13Q8NBR0 393 aaPredicted RBP6.59□□□□□ -1.35
CLK4-213ENST00000523013 RGS22Q8NE09 1264 aa6.59□□□□□ -1.35
CLK4-213ENST00000523013 ANKRD34BA5PLL1 514 aa6.58□□□□□ -1.36
CLK4-213ENST00000523013 F8W031 263 aaPredicted RBP6.58□□□□□ -1.36
CLK4-213ENST00000523013 ATF2P15336 505 aa6.58□□□□□ -1.36
CLK4-213ENST00000523013 SEPHS1P49903 392 aa6.58□□□□□ -1.36
CLK4-213ENST00000523013 CPNE8Q86YQ8 564 aa6.58□□□□□ -1.36
CLK4-213ENST00000523013 LINC01356Q8N9X3 169 aa6.58□□□□□ -1.36
CLK4-213ENST00000523013 MTA3Q9BTC8 594 aa6.58□□□□□ -1.36
CLK4-213ENST00000523013 STRIP2Q9ULQ0 834 aa6.58□□□□□ -1.36
CLK4-213ENST00000523013 INPP5FQ9Y2H2 1132 aa6.58□□□□□ -1.36
CLK4-213ENST00000523013 SUGT1Q9Y2Z0 365 aa6.58□□□□□ -1.36
CLK4-213ENST00000523013 OTOL1A6NHN0 477 aaPredicted RBP6.57□□□□□ -1.36
CLK4-213ENST00000523013 FFAR3O14843 346 aa6.57□□□□□ -1.36
CLK4-213ENST00000523013 PFKLP17858 780 aa6.57□□□□□ -1.36
CLK4-213ENST00000523013 CAP1Q01518 475 aa6.57□□□□□ -1.36
CLK4-213ENST00000523013 RXFP1Q9HBX9 757 aa6.57□□□□□ -1.36
CLK4-213ENST00000523013 RTEL1Q9NZ71 1219 aa6.57□□□□□ -1.36
CLK4-213ENST00000523013 RWDD3Q9Y3V2 267 aa6.57□□□□□ -1.36
CLK4-213ENST00000523013 SASH1O94885 1247 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 PLA2G1BP04054 148 aaKnown RBP6.56□□□□□ -1.36
CLK4-213ENST00000523013 ATF4P18848 351 aaPredicted RBP6.56□□□□□ -1.36
CLK4-213ENST00000523013 PAMP19021 973 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 BUD31P41223 144 aaPredicted RBP6.56□□□□□ -1.36
CLK4-213ENST00000523013 TARBP2Q15633 366 aaKnown RBP6.56□□□□□ -1.36
CLK4-213ENST00000523013 LZTR1Q8N653 840 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 SYT8Q8NBV8 401 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 FEZF2Q8TBJ5 459 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 COPS5Q92905 334 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 RELTQ969Z4 430 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 CCSER2Q9H7U1 834 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 GULP1Q9UBP9 304 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 AKT3Q9Y243 479 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 EMC9Q9Y3B6 208 aa6.56□□□□□ -1.36
CLK4-213ENST00000523013 NPHP3-ACAD11A0A0J9YXS1 232 aa6.55□□□□□ -1.36
CLK4-213ENST00000523013 C7orf72A4D263 438 aa6.55□□□□□ -1.36
CLK4-213ENST00000523013 ASGR2P07307 311 aa6.55□□□□□ -1.36
CLK4-213ENST00000523013 MC3RP41968 323 aa6.55□□□□□ -1.36
CLK4-213ENST00000523013 VWA3BQ502W6 1294 aa6.55□□□□□ -1.36
CLK4-213ENST00000523013 BVESQ8NE79 360 aa6.55□□□□□ -1.36
CLK4-213ENST00000523013 ANAPC16Q96DE5 110 aa6.55□□□□□ -1.36
CLK4-213ENST00000523013 TSPAN17Q96FV3 270 aa6.55□□□□□ -1.36
CLK4-213ENST00000523013 KRTAP4-2Q9BYR5 136 aa6.55□□□□□ -1.36
CLK4-213ENST00000523013 RNF38Q9H0F5 515 aa6.55□□□□□ -1.36
CLK4-213ENST00000523013 LUC7LQ9NQ29 371 aaKnown RBP6.55□□□□□ -1.36
CLK4-213ENST00000523013 FOXD2O60548 495 aaPredicted RBP6.54□□□□□ -1.36
CLK4-213ENST00000523013 KCNH1O95259 989 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 ZNF143P52747 638 aaPredicted RBP6.54□□□□□ -1.36
CLK4-213ENST00000523013 HTRA3P83110 453 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 FOXO4P98177 505 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 CYP4F3Q08477 520 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 NFIXQ14938 502 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 MBLAC2Q68D91 279 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 CABP7Q86V35 215 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 SP8Q8IXZ3 490 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 NETO2Q8NC67 525 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 FNIP1Q8TF40 1166 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 APBA2Q99767 749 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 LGR4Q9BXB1 951 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 BCAS3Q9H6U6 928 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 CLEC1BQ9P126 229 aa6.54□□□□□ -1.36
CLK4-213ENST00000523013 DBR1Q9UK59 544 aaKnown RBP6.54□□□□□ -1.36
CLK4-213ENST00000523013 TRBV23OR9-2A0A075B6M9 112 aa6.53□□□□□ -1.36
CLK4-213ENST00000523013 NCAM1P13591 858 aa6.53□□□□□ -1.36
CLK4-213ENST00000523013 PLS3P13797 630 aa6.53□□□□□ -1.36
CLK4-213ENST00000523013 PMLP29590 882 aa6.53□□□□□ -1.36
CLK4-213ENST00000523013 SCRN1Q12765 414 aa6.53□□□□□ -1.36
CLK4-213ENST00000523013 NCAPHQ15003 741 aa6.53□□□□□ -1.36
CLK4-213ENST00000523013 NLGN1Q8N2Q7 840 aa6.53□□□□□ -1.36
CLK4-213ENST00000523013 ALG3Q92685 438 aa6.53□□□□□ -1.36
CLK4-213ENST00000523013 MRGPRX3Q96LB0 322 aa6.53□□□□□ -1.36
CLK4-213ENST00000523013 GPRC5CQ9NQ84 441 aa6.53□□□□□ -1.36
CLK4-213ENST00000523013 SMAD7O15105 426 aaKnown RBP6.52□□□□□ -1.37
CLK4-213ENST00000523013 DLX2Q07687 328 aaPredicted RBP6.52□□□□□ -1.37
CLK4-213ENST00000523013 WWC2Q6AWC2 1192 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 GTF2IRD2BQ6EKJ0 949 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 POMZP3Q6PJE2 187 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 B3GNT8Q7Z7M8 397 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 GTF2IRD2Q86UP8 949 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 TRIM59Q8IWR1 403 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 ZDHHC14Q8IZN3 488 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 CXorf38Q8TB03 319 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 DPF3Q92784 378 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 PEX11GQ96HA9 241 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 MMP19Q99542 508 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 KRTAP4-11Q9BYQ6 195 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.52□□□□□ -1.37
CLK4-213ENST00000523013 MRVI1Q9Y6F6 885 aa6.52□□□□□ -1.37
CLK4-213ENST00000523013 NPHS1O60500 1241 aa6.51□□□□□ -1.37
CLK4-213ENST00000523013 THBDP07204 575 aa6.51□□□□□ -1.37
CLK4-213ENST00000523013 NAT2P11245 290 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms