RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 NCOA7Q8NI08 942 aa21.82■■□□□ 1.08
SPIDR-220ENST00000522900 BADQ92934 168 aa21.82■■□□□ 1.08
SPIDR-220ENST00000522900 LSG1Q9H089 658 aaKnown RBP21.82■■□□□ 1.08
SPIDR-220ENST00000522900 VTA1Q9NP79 307 aa21.82■■□□□ 1.08
SPIDR-220ENST00000522900 MAD2L2Q9UI95 211 aa21.82■■□□□ 1.08
SPIDR-220ENST00000522900 LCTP09848 1927 aa21.81■■□□□ 1.08
SPIDR-220ENST00000522900 KLRF2D3W0D1 207 aa21.81■■□□□ 1.08
SPIDR-220ENST00000522900 DHX16O60231 1041 aaKnown RBP21.81■■□□□ 1.08
SPIDR-220ENST00000522900 ANTXR2P58335 489 aa21.81■■□□□ 1.08
SPIDR-220ENST00000522900 SLC35G1Q2M3R5 365 aa21.81■■□□□ 1.08
SPIDR-220ENST00000522900 RALYLQ86SE5 291 aaKnown RBP21.81■■□□□ 1.08
SPIDR-220ENST00000522900 TLK2Q86UE8 772 aa21.81■■□□□ 1.08
SPIDR-220ENST00000522900 RGS22Q8NE09 1264 aa21.81■■□□□ 1.08
SPIDR-220ENST00000522900 VTI1AQ96AJ9 217 aa21.81■■□□□ 1.08
SPIDR-220ENST00000522900 ESYT1Q9BSJ8 1104 aa21.81■■□□□ 1.08
SPIDR-220ENST00000522900 PALM3A6NDB9 673 aaPredicted RBP21.8■■□□□ 1.08
SPIDR-220ENST00000522900 CLTBP09497 229 aa21.8■■□□□ 1.08
SPIDR-220ENST00000522900 CDK7P50613 346 aa21.8■■□□□ 1.08
SPIDR-220ENST00000522900 FAAP100Q0VG06 881 aa21.8■■□□□ 1.08
SPIDR-220ENST00000522900 COL9A3Q14050 684 aaPredicted RBP21.8■■□□□ 1.08
SPIDR-220ENST00000522900 LRIT3Q3SXY7 679 aa21.8■■□□□ 1.08
SPIDR-220ENST00000522900 ANKRD33Q7Z3H0 272 aa21.8■■□□□ 1.08
SPIDR-220ENST00000522900 FBXO11Q86XK2 927 aa21.8■■□□□ 1.08
SPIDR-220ENST00000522900 MB21D2Q8IYB1 491 aaPredicted RBP21.8■■□□□ 1.08
SPIDR-220ENST00000522900 GLT1D1Q96MS3 346 aa21.8■■□□□ 1.08
SPIDR-220ENST00000522900 ELP1O95163 1332 aa21.8■■□□□ 1.08
SPIDR-220ENST00000522900 ABCB11O95342 1321 aa21.8■■□□□ 1.08
SPIDR-220ENST00000522900 PPP1R11O60927 126 aaPredicted RBP21.79■■□□□ 1.08
SPIDR-220ENST00000522900 EDNRBP24530 442 aa21.79■■□□□ 1.08
SPIDR-220ENST00000522900 IGDCC4Q8TDY8 1250 aa21.79■■□□□ 1.08
SPIDR-220ENST00000522900 AP5M1Q9H0R1 490 aa21.79■■□□□ 1.08
SPIDR-220ENST00000522900 GPHNQ9NQX3 736 aaPredicted RBP21.79■■□□□ 1.08
SPIDR-220ENST00000522900 COL20A1Q9P218 1284 aa21.79■■□□□ 1.08
SPIDR-220ENST00000522900 LOC102724159A0A0B4J2E5 919 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 GRM4Q14833 912 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 WTAPQ15007 396 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 PWP2Q15269 919 aaKnown RBP21.78■■□□□ 1.08
SPIDR-220ENST00000522900 FSCN1Q16658 493 aaKnown RBP21.78■■□□□ 1.08
SPIDR-220ENST00000522900 DUSP28Q4G0W2 176 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 CXCL17Q6UXB2 119 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 DNERQ8NFT8 737 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 SYTL5Q8TDW5 730 aaPredicted RBP21.78■■□□□ 1.08
SPIDR-220ENST00000522900 MTMR8Q96EF0 704 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 TOX2Q96NM4 488 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 TAAR1Q96RJ0 339 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 WDR11Q9BZH6 1224 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 TMEM39AQ9NV64 488 aa21.78■■□□□ 1.08
SPIDR-220ENST00000522900 LRRC37A2A6NM11 1700 aa21.77■■□□□ 1.08
SPIDR-220ENST00000522900 RBM47A0AV96 593 aaKnown RBP21.77■■□□□ 1.08
SPIDR-220ENST00000522900 ERICH2A1L162 156 aa21.77■■□□□ 1.08
SPIDR-220ENST00000522900 KIAA0355O15063 1070 aa21.77■■□□□ 1.08
SPIDR-220ENST00000522900 PDE4DQ08499 809 aa21.77■■□□□ 1.08
SPIDR-220ENST00000522900 TROAPQ12815 778 aa21.77■■□□□ 1.08
SPIDR-220ENST00000522900 BMP2KLQ5H9B9 411 aa21.77■■□□□ 1.08
SPIDR-220ENST00000522900 TMEM67Q5HYA8 995 aa21.77■■□□□ 1.08
SPIDR-220ENST00000522900 MRPL11Q9Y3B7 192 aaKnown RBP21.77■■□□□ 1.08
SPIDR-220ENST00000522900 Q9Y3F1 56 aa21.77■■□□□ 1.08
SPIDR-220ENST00000522900 SZT2Q5T011 3432 aa21.76■■□□□ 1.07
SPIDR-220ENST00000522900 A0A0U1RQG5 324 aaPredicted RBP21.76■■□□□ 1.07
SPIDR-220ENST00000522900 DCDC2CA8MYV0 355 aa21.76■■□□□ 1.07
SPIDR-220ENST00000522900 ARVCFO00192 962 aa21.76■■□□□ 1.07
SPIDR-220ENST00000522900 OPLAHO14841 1288 aa21.76■■□□□ 1.07
SPIDR-220ENST00000522900 SLC27A2O14975 620 aa21.76■■□□□ 1.07
SPIDR-220ENST00000522900 SHHQ15465 462 aa21.76■■□□□ 1.07
SPIDR-220ENST00000522900 C9orf50Q5SZB4 431 aa21.76■■□□□ 1.07
SPIDR-220ENST00000522900 GRIN2DO15399 1336 aa21.76■■□□□ 1.07
SPIDR-220ENST00000522900 ZBTB5O15062 677 aa21.75■■□□□ 1.07
SPIDR-220ENST00000522900 CYTH3O43739 400 aa21.75■■□□□ 1.07
SPIDR-220ENST00000522900 RAG1P15918 1043 aa21.75■■□□□ 1.07
SPIDR-220ENST00000522900 EPHB4P54760 987 aa21.75■■□□□ 1.07
SPIDR-220ENST00000522900 SART3Q15020 963 aaKnown RBP21.75■■□□□ 1.07
SPIDR-220ENST00000522900 NECTIN1Q15223 517 aa21.75■■□□□ 1.07
SPIDR-220ENST00000522900 MCF2L2Q86YR7 1114 aa21.75■■□□□ 1.07
SPIDR-220ENST00000522900 PIGSQ96S52 555 aa21.75■■□□□ 1.07
SPIDR-220ENST00000522900 AMNQ9BXJ7 453 aa21.75■■□□□ 1.07
SPIDR-220ENST00000522900 RIOX1Q9H6W3 641 aa21.75■■□□□ 1.07
SPIDR-220ENST00000522900 ANO2Q9NQ90 1003 aa21.75■■□□□ 1.07
SPIDR-220ENST00000522900 LTBP2Q14767 1821 aa21.74■■□□□ 1.07
SPIDR-220ENST00000522900 CREB3L3Q68CJ9 461 aa21.74■■□□□ 1.07
SPIDR-220ENST00000522900 HOMER1Q86YM7 354 aa21.74■■□□□ 1.07
SPIDR-220ENST00000522900 SLC43A3Q8NBI5 491 aa21.74■■□□□ 1.07
SPIDR-220ENST00000522900 COPS5Q92905 334 aa21.74■■□□□ 1.07
SPIDR-220ENST00000522900 LY9Q9HBG7 655 aa21.74■■□□□ 1.07
SPIDR-220ENST00000522900 PCDHA1Q9Y5I3 950 aa21.74■■□□□ 1.07
SPIDR-220ENST00000522900 PRC1O43663 620 aa21.73■■□□□ 1.07
SPIDR-220ENST00000522900 CFBP00751 764 aa21.73■■□□□ 1.07
SPIDR-220ENST00000522900 PSMC6P62333 389 aa21.73■■□□□ 1.07
SPIDR-220ENST00000522900 ITGA7Q13683 1181 aa21.73■■□□□ 1.07
SPIDR-220ENST00000522900 CATIPQ7Z7H3 387 aa21.73■■□□□ 1.07
SPIDR-220ENST00000522900 FAM126BQ8IXS8 530 aa21.73■■□□□ 1.07
SPIDR-220ENST00000522900 MPHOSPH6Q99547 160 aaKnown RBP21.73■■□□□ 1.07
SPIDR-220ENST00000522900 MYL10Q9BUA6 226 aa21.73■■□□□ 1.07
SPIDR-220ENST00000522900 MAF1Q9H063 256 aa21.73■■□□□ 1.07
SPIDR-220ENST00000522900 TBX21Q9UL17 535 aa21.73■■□□□ 1.07
SPIDR-220ENST00000522900 ZEB2O60315 1214 aa21.72■■□□□ 1.07
SPIDR-220ENST00000522900 CABYRO75952 493 aa21.72■■□□□ 1.07
SPIDR-220ENST00000522900 ARIH2O95376 493 aa21.72■■□□□ 1.07
SPIDR-220ENST00000522900 Q7L0L9 218 aa21.72■■□□□ 1.07
SPIDR-220ENST00000522900 OR6J1Q8NGC5 347 aa21.72■■□□□ 1.07
SPIDR-220ENST00000522900 NSUN6Q8TEA1 469 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms